RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 SONP18583 2426 aaKnown RBP4.17□□□□□ -1.74
VPS41-211ENST00000466017 CSMD1Q96PZ7 3565 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 TLN2Q9Y4G6 2542 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 ZANQ9Y493 2812 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 A0A087X0K7 114 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 LOC102723971A0A1B0GUV8 181 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 TMEM218A2RU14 115 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 A8MWP6 167 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 KRBOX1C9JBD0 128 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 LINC01619G3V211 115 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 TMEM250H0YL14 139 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 IGHV3-23P01764 117 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 NBEAP1P0C6P0 100 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 RPL7P18124 248 aaKnown RBP4.17□□□□□ -1.74
VPS41-211ENST00000466017 S100A1P23297 94 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 NPPCP23582 126 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 BMI1P35226 326 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 LYZP61626 148 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 KLF5Q13887 457 aaPredicted RBP4.17□□□□□ -1.74
VPS41-211ENST00000466017 PDE6HQ13956 83 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 C10orf91Q5T1B1 145 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 SPATA31B1PQ5VZV4 182 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 C16orf54Q6UWD8 224 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 C10orf99Q6UWK7 81 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 Q71RC1 249 aaPredicted RBP4.17□□□□□ -1.74
VPS41-211ENST00000466017 COMMD7Q86VX2 200 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 BPIFA4PQ86YQ2 179 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 METTL26Q96S19 204 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 PAXXQ9BUH6 204 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 ELOVL1Q9BW60 279 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 SLC25A2Q9BXI2 301 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 SLC25A22Q9H936 323 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 GNB4Q9HAV0 340 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 UFC1Q9Y3C8 167 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 S4R3C0 116 aa4.17□□□□□ -1.74
VPS41-211ENST00000466017 FN1P02751 2386 aaKnown RBP4.17□□□□□ -1.74
VPS41-211ENST00000466017 SVEP1Q4LDE5 3571 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 SPRY2O43597 315 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 TRBV12-3P01733 135 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 IGHV3-11P01762 117 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 ARL14EPLP0DKL9 152 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 IGLC2P0DOY2 106 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 BCL2P10415 239 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 GP9P14770 177 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 MYCNOSP40205 109 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 FGF8P55075 233 aaPredicted RBP4.16□□□□□ -1.74
VPS41-211ENST00000466017 RPEL1Q2QD12 228 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 SAMD13Q5VXD3 122 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 MORN5Q5VZ52 161 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 FAM90A2PQ658T7 463 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 NDUFA11Q86Y39 141 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 CCDC28AQ8IWP9 274 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 SLC7A5P1Q8MH63 180 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 C11orf44Q8N8P7 122 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 OR1N2Q8NGR9 330 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 PCNPQ8WW12 178 aaKnown RBP4.16□□□□□ -1.74
VPS41-211ENST00000466017 RPUSD4Q96CM3 377 aaKnown RBP4.16□□□□□ -1.74
VPS41-211ENST00000466017 FXYD5Q96DB9 178 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 NARS2Q96I59 477 aaKnown RBP4.16□□□□□ -1.74
VPS41-211ENST00000466017 UHRF2Q96PU4 802 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 TMEM231Q9H6L2 316 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 DAZ1Q9NQZ3 744 aaKnown RBP4.16□□□□□ -1.74
VPS41-211ENST00000466017 SMPXQ9UHP9 88 aa4.16□□□□□ -1.74
VPS41-211ENST00000466017 ZFHX3Q15911 3703 aa4.15□□□□□ -1.74
VPS41-211ENST00000466017 IGHV4OR15-8A0A075B7B6 117 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 A0A087WW49 117 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 TRAV2A0A0B4J234 112 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 TRAV5A0A0B4J249 113 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 IGHV7-4-1A0A0J9YVY3 117 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 FAM74A7A6NL05 159 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 PPP5D1E7EU14 171 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 F6UZH7 168 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 PDE6DO43924 150 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 OR7C2O60412 319 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 PAGE4O60829 102 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 S100A9P06702 114 aaKnown RBP4.15□□□□□ -1.75
VPS41-211ENST00000466017 SRP19P09132 144 aaKnown RBP4.15□□□□□ -1.75
VPS41-211ENST00000466017 CD28P10747 220 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 BTF3P20290 206 aaKnown RBP4.15□□□□□ -1.75
VPS41-211ENST00000466017 CD81P60033 236 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 DEFA5Q01523 94 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 MEF2BQ02080 365 aaPredicted RBP4.15□□□□□ -1.75
VPS41-211ENST00000466017 FAM74A3Q4VXF1 159 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 UNQ9165/PRO28630Q6UXU0 137 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 OR8I2Q8N0Y5 310 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 OR11H1Q8NG94 326 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 OR4F17Q8NGA8 305 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 GLMPQ8WWB7 406 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 HIST1H2BAQ96A08 127 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 C11orf52Q96A22 123 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 MRPL53Q96EL3 112 aaKnown RBP4.15□□□□□ -1.75
VPS41-211ENST00000466017 GRAMD2BQ96HH9 432 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 OR4F4Q96R69 305 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 SEC11CQ9BY50 192 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 EIF5A2Q9GZV4 153 aaKnown RBP4.15□□□□□ -1.75
VPS41-211ENST00000466017 SLC35B3Q9H1N7 401 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 ZNF586Q9NXT0 402 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 DOK5Q9P104 306 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 GNG13Q9P2W3 67 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 PEMTQ9UBM1 199 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms