RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 MBD3L5A6NJ08 208 aaPredicted RBP9.96□□□□□ -0.81
CLCNKA-204ENST00000464764 RIGQ13278 110 aa9.96□□□□□ -0.81
CLCNKA-204ENST00000464764 C16orf54Q6UWD8 224 aa9.96□□□□□ -0.81
CLCNKA-204ENST00000464764 MBD3L2Q8NHZ7 208 aaPredicted RBP9.96□□□□□ -0.81
CLCNKA-204ENST00000464764 TTTY13Q9BZ97 58 aa9.96□□□□□ -0.81
CLCNKA-204ENST00000464764 SPTA1P02549 2419 aa9.96□□□□□ -0.81
CLCNKA-204ENST00000464764 K7EMI3 77 aa9.96□□□□□ -0.82
CLCNKA-204ENST00000464764 ZNF207O43670 478 aaKnown RBP9.96□□□□□ -0.82
CLCNKA-204ENST00000464764 PSG8Q9UQ74 426 aa9.96□□□□□ -0.82
CLCNKA-204ENST00000464764 NMUP48645 174 aa9.96□□□□□ -0.82
CLCNKA-204ENST00000464764 LYZL1Q6UWQ5 148 aa9.96□□□□□ -0.82
CLCNKA-204ENST00000464764 FBXL15Q9H469 300 aa9.96□□□□□ -0.82
CLCNKA-204ENST00000464764 C9orf118A6NHY6 69 aa9.95□□□□□ -0.82
CLCNKA-204ENST00000464764 C19orf67A6NJJ6 358 aa9.95□□□□□ -0.82
CLCNKA-204ENST00000464764 MEF2CQ06413 473 aaPredicted RBP9.95□□□□□ -0.82
CLCNKA-204ENST00000464764 PPIAL4EA0A075B759 164 aa9.95□□□□□ -0.82
CLCNKA-204ENST00000464764 IGKV1-17P01599 117 aa9.95□□□□□ -0.82
CLCNKA-204ENST00000464764 PPIAL4FP0DN26 164 aa9.95□□□□□ -0.82
CLCNKA-204ENST00000464764 SEC11AP67812 179 aa9.95□□□□□ -0.82
CLCNKA-204ENST00000464764 DKK2Q9UBU2 259 aa9.95□□□□□ -0.82
CLCNKA-204ENST00000464764 INSIG2Q9Y5U4 225 aa9.95□□□□□ -0.82
CLCNKA-204ENST00000464764 ACACAQ13085 2346 aa9.95□□□□□ -0.82
CLCNKA-204ENST00000464764 RIF1Q5UIP0 2472 aaKnown RBP9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 A0A0G2JLM5 398 aa9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 TMEM30BQ3MIR4 351 aa9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 C18orf15Q96N68 181 aa9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 SIGLEC9Q9Y336 463 aa9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 TRBV19A0A075B6N1 114 aa9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 TEX22C9J3V5 150 aa9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 NDUFB3O43676 98 aa9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 HOXB4P17483 251 aaPredicted RBP9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 LOXP28300 417 aaPredicted RBP9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 RPL24P83731 157 aaKnown RBP9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 KLF17Q5JT82 389 aaPredicted RBP9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 PRELID3AQ96N28 172 aa9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 GUCD1Q96NT3 240 aa9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 RASL11BQ9BPW5 248 aa9.94□□□□□ -0.82
CLCNKA-204ENST00000464764 C17orf100A8MU93 164 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 TMEM238C9JI98 176 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 GAS8-AS1O95177 125 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 APOBEC3AP31941 199 aaPredicted RBP9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 PLP1P60201 277 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 ADIPOQQ15848 244 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 SIGLEC15Q6ZMC9 328 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 S100A7AQ86SG5 101 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 BOD1L2Q8IYS8 172 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 NGBQ9NPG2 151 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 ZGRF1Q86YA3 2104 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 A1L4Q6 167 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 H3BRM9 83 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 TMEM178BH3BS89 294 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 AKAP13Q12802 2813 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 APC2O95996 2303 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 IGHV1-8P0DP01 117 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 FCGR2BP31994 310 aaPredicted RBP9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 LGALS7P47929 136 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 IGFL2Q6UWQ7 119 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 ADAMTSL5Q6ZMM2 481 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 OR2K2Q8NGT1 345 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 PRO3102Q9H379 93 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 TTC28Q96AY4 2481 aa9.93□□□□□ -0.82
CLCNKA-204ENST00000464764 SMAD7O15105 426 aaKnown RBP9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 DLX6P56179 175 aa9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 IGFL4Q6B9Z1 124 aa9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 PVRIGQ6DKI7 326 aa9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 GTF2H5Q6ZYL4 71 aa9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 G3V4G9 280 aa9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 I3L2K1 104 aa9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 K7EP34 96 aa9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 MC5RP33032 325 aa9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 PSG3Q16557 428 aa9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 MRPL51Q4U2R6 128 aaKnown RBP9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 PPP1R27Q86WC6 154 aa9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 ANKRD11Q6UB99 2663 aaPredicted RBP9.92□□□□□ -0.82
CLCNKA-204ENST00000464764 A6NDN8 102 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 NPYP01303 97 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 CRYGBP07316 175 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 OR1N2Q8NGR9 330 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 MSRB1Q9NZV6 116 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 GNG7O60262 68 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 IL4P05112 153 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 COX7A1P24310 79 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 PAX2Q02962 417 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 FAM104BQ5XKR9 115 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 LINC00311Q8N616 119 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 ABHD17AQ96GS6 310 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 ZNF414Q96IQ9 312 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 TMEM14CQ9P0S9 112 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 K7EM74 188 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 K7ERJ3 54 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 PLA2G2CQ5R387 149 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 SPCS1Q9Y6A9 102 aa9.91□□□□□ -0.82
CLCNKA-204ENST00000464764 AKAP6Q13023 2319 aa9.9□□□□□ -0.82
CLCNKA-204ENST00000464764 ARHGAP32A7KAX9 2087 aa9.9□□□□□ -0.82
CLCNKA-204ENST00000464764 IGKV2-40A0A087WW87 121 aaPredicted RBP9.9□□□□□ -0.82
CLCNKA-204ENST00000464764 IGKV2D-26A0A0A0MRZ7 120 aa9.9□□□□□ -0.82
CLCNKA-204ENST00000464764 LYNX1G3V0Z9 82 aa9.9□□□□□ -0.82
CLCNKA-204ENST00000464764 IGKV2D-40P01614 121 aaPredicted RBP9.9□□□□□ -0.82
CLCNKA-204ENST00000464764 LYNX1P0DP58 116 aa9.9□□□□□ -0.82
CLCNKA-204ENST00000464764 BSPH1Q075Z2 132 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms