RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 SSX7Q7RTT5 188 aa6.64□□□□□ -1.35
PTPN18-209ENST00000464576 DEDD2Q8WXF8 326 aa6.64□□□□□ -1.35
PTPN18-209ENST00000464576 RPUSD4Q96CM3 377 aaKnown RBP6.64□□□□□ -1.35
PTPN18-209ENST00000464576 GNPNAT1Q96EK6 184 aaPredicted RBP6.64□□□□□ -1.35
PTPN18-209ENST00000464576 NPVFQ9HCQ7 196 aa6.64□□□□□ -1.35
PTPN18-209ENST00000464576 NOP10Q9NPE3 64 aaKnown RBP6.64□□□□□ -1.35
PTPN18-209ENST00000464576 PTTG2Q9NZH5 202 aa6.64□□□□□ -1.35
PTPN18-209ENST00000464576 TRAV8-2A0A0B4J237 113 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 SNURFLB1AK76 121 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 H7BYZ3 331 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 CRXO43186 299 aaPredicted RBP6.63□□□□□ -1.35
PTPN18-209ENST00000464576 SCGB1D2O95969 90 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 CXCL3P19876 107 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 UBE2MP61081 183 aaKnown RBP6.63□□□□□ -1.35
PTPN18-209ENST00000464576 POLR2GP62487 172 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTPN18-209ENST00000464576 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 TEPPQ6URK8 271 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 CCDC190Q86UF4 302 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 MAPKAPK5-AS1Q8N8E1 139 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 OR10P1Q8NGE3 313 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 ZNRF2Q8NHG8 242 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 TMEM263Q8WUH6 116 aaKnown RBP6.63□□□□□ -1.35
PTPN18-209ENST00000464576 UHRF2Q96PU4 802 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 SLIRPQ9GZT3 109 aaKnown RBP6.63□□□□□ -1.35
PTPN18-209ENST00000464576 Q9H8V8 135 aa6.63□□□□□ -1.35
PTPN18-209ENST00000464576 PMS2P5A8MQ11 134 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 PRSS46E5RG02 174 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 H3BMQ9 156 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 COX7A2P2O60397 106 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 CDK2AP2O75956 126 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 RLN2P04090 185 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 METTL15P1P0C7V9 234 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 RAB31Q13636 194 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 SPANXN2Q5MJ10 180 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 PXDC1Q5TGL8 231 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 LCN15Q6UWW0 184 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 ZNF546Q86UE3 836 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 BPIFA4PQ86YQ2 179 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 RNF141Q8WVD5 230 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 SMIM8Q96KF7 97 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 SOSTQ9BQB4 213 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 SLC50A1Q9BRV3 221 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 ARV1Q9H2C2 271 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 LINC00588Q9Y4M8 146 aa6.62□□□□□ -1.35
PTPN18-209ENST00000464576 DYNC1H1Q14204 4646 aaKnown RBP6.61□□□□□ -1.35
PTPN18-209ENST00000464576 TRAV26-1A0A087WT03 109 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 A0A087X0K7 114 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 C9orf170A2RU37 121 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 CENPXA8MT69 81 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 CXCL2P19875 107 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 M6PRP20645 277 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 PLP1P60201 277 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 DLK1P80370 383 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 ID3Q02535 119 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 C4orf46Q504U0 113 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 TRIQKQ629K1 86 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 LINC00305Q7Z4B0 112 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 TRIM63Q969Q1 353 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 C17orf77Q96MU5 243 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 C20orf144Q9BQM9 153 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 GSKIPQ9P0R6 139 aa6.61□□□□□ -1.35
PTPN18-209ENST00000464576 A0A0J9YY99 117 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 GAGE12BA1L429 117 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 NAP1L6A6NFF2 107 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 FNDC10F2Z333 226 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 J3KRW8 73 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 L7N2F9 121 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 GAGE7O76087 117 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 SNRPCP09234 159 aaKnown RBP6.6□□□□□ -1.35
PTPN18-209ENST00000464576 GAGE12FP0CL80 117 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 GAGE12GP0CL81 117 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 GAGE12IP0CL82 117 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 PRB4P10163 310 aaPredicted RBP6.6□□□□□ -1.35
PTPN18-209ENST00000464576 LEPP41159 167 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 VAMP2P63027 116 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 SLC38A11Q08AI6 406 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 ZNF846Q147U1 533 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 IAH1Q2TAA2 248 aaPredicted RBP6.6□□□□□ -1.35
PTPN18-209ENST00000464576 C10orf113Q5VZT2 155 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 Q6ZRG5 221 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 SPATA12Q7Z6I5 190 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 RXFP4Q8TDU9 374 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 PXMP4Q9Y6I8 212 aa6.6□□□□□ -1.35
PTPN18-209ENST00000464576 TRGV2A0A075B6R0 118 aa6.59□□□□□ -1.35
PTPN18-209ENST00000464576 LINC00854A0A1B0GVQ3 168 aa6.59□□□□□ -1.35
PTPN18-209ENST00000464576 PLAC8L1A1L4L8 177 aa6.59□□□□□ -1.35
PTPN18-209ENST00000464576 EREGO14944 169 aa6.59□□□□□ -1.35
PTPN18-209ENST00000464576 AGPAT2O15120 278 aa6.59□□□□□ -1.35
PTPN18-209ENST00000464576 TSC22D2O75157 780 aa6.59□□□□□ -1.35
PTPN18-209ENST00000464576 OR4E1P0C645 316 aa6.59□□□□□ -1.35
PTPN18-209ENST00000464576 BCAP31P51572 246 aa6.59□□□□□ -1.35
PTPN18-209ENST00000464576 ZBTB8BQ8NAP8 495 aaPredicted RBP6.59□□□□□ -1.35
PTPN18-209ENST00000464576 RNASE8Q8TDE3 154 aaKnown RBP6.59□□□□□ -1.35
PTPN18-209ENST00000464576 ZNF503Q96F45 646 aa6.59□□□□□ -1.35
PTPN18-209ENST00000464576 ZNF331Q9NQX6 463 aaPredicted RBP6.59□□□□□ -1.35
PTPN18-209ENST00000464576 TRAV12-3A0A0B4J271 114 aa6.58□□□□□ -1.36
PTPN18-209ENST00000464576 K7EPK0 472 aa6.58□□□□□ -1.36
PTPN18-209ENST00000464576 ZNF701M0R085 212 aaPredicted RBP6.58□□□□□ -1.36
PTPN18-209ENST00000464576 TAS2R30P59541 319 aa6.58□□□□□ -1.36
PTPN18-209ENST00000464576 GUK1Q16774 197 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms