RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 Q8NAQ8 132 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 TMEM37Q8WXS4 190 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 SLC35B3Q9H1N7 401 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 SLC39A9Q9NUM3 307 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 ALG5Q9Y673 324 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 TRAV8-2A0A0B4J237 113 aa11.15□□□□□ -0.62
VARS-219ENST00000461328 ZNF705EA8MWA4 302 aaPredicted RBP11.15□□□□□ -0.62
VARS-219ENST00000461328 MPDU1O75352 247 aa11.15□□□□□ -0.62
VARS-219ENST00000461328 DUSP14O95147 198 aaKnown RBP11.15□□□□□ -0.62
VARS-219ENST00000461328 LY6G6CO95867 125 aa11.15□□□□□ -0.62
VARS-219ENST00000461328 SNRPCP09234 159 aaKnown RBP11.15□□□□□ -0.62
VARS-219ENST00000461328 MORN5Q5VZ52 161 aa11.15□□□□□ -0.62
VARS-219ENST00000461328 LCN15Q6UWW0 184 aa11.15□□□□□ -0.62
VARS-219ENST00000461328 CSNK1G2-AS1Q8NCQ2 148 aa11.15□□□□□ -0.62
VARS-219ENST00000461328 LYSTQ99698 3801 aa11.15□□□□□ -0.62
VARS-219ENST00000461328 NPCDR1Q9BY65 106 aa11.15□□□□□ -0.62
VARS-219ENST00000461328 X6R8D5 127 aa11.15□□□□□ -0.62
VARS-219ENST00000461328 H3BTX0 84 aa11.14□□□□□ -0.63
VARS-219ENST00000461328 MPC2O95563 127 aa11.14□□□□□ -0.63
VARS-219ENST00000461328 CXCL2P19875 107 aa11.14□□□□□ -0.63
VARS-219ENST00000461328 CXCL3P19876 107 aa11.14□□□□□ -0.63
VARS-219ENST00000461328 HLA-DMBP28068 263 aa11.14□□□□□ -0.63
VARS-219ENST00000461328 CNN1P51911 297 aaKnown RBP11.14□□□□□ -0.63
VARS-219ENST00000461328 HIST1H1AQ02539 215 aaPredicted RBP11.14□□□□□ -0.63
VARS-219ENST00000461328 ZNF709Q8N972 641 aa11.14□□□□□ -0.63
VARS-219ENST00000461328 CLUHP3Q96NS8 147 aa11.14□□□□□ -0.63
VARS-219ENST00000461328 SLC50A1Q9BRV3 221 aa11.14□□□□□ -0.63
VARS-219ENST00000461328 KCNIP2Q9NS61 270 aa11.14□□□□□ -0.63
VARS-219ENST00000461328 MBD2Q9UBB5 411 aa11.14□□□□□ -0.63
VARS-219ENST00000461328 GOLT1BQ9Y3E0 138 aa11.14□□□□□ -0.63
VARS-219ENST00000461328 MRPS12O15235 138 aaKnown RBP11.13□□□□□ -0.63
VARS-219ENST00000461328 ZNF705DP0CH99 300 aaPredicted RBP11.13□□□□□ -0.63
VARS-219ENST00000461328 ZNF705BP0CI00 300 aaPredicted RBP11.13□□□□□ -0.63
VARS-219ENST00000461328 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
VARS-219ENST00000461328 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
VARS-219ENST00000461328 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
VARS-219ENST00000461328 PSG3Q16557 428 aa11.13□□□□□ -0.63
VARS-219ENST00000461328 CHAC2Q8WUX2 184 aa11.13□□□□□ -0.63
VARS-219ENST00000461328 PPP1R14DQ9NXH3 145 aa11.13□□□□□ -0.63
VARS-219ENST00000461328 ALMS1Q8TCU4 4167 aa11.13□□□□□ -0.63
VARS-219ENST00000461328 DNAH1Q9P2D7 4330 aa11.12□□□□□ -0.63
VARS-219ENST00000461328 TRAV5A0A0B4J249 113 aa11.12□□□□□ -0.63
VARS-219ENST00000461328 RHOBP62745 196 aa11.12□□□□□ -0.63
VARS-219ENST00000461328 RPUSD4Q96CM3 377 aaKnown RBP11.12□□□□□ -0.63
VARS-219ENST00000461328 ATP5SQ99766 215 aa11.12□□□□□ -0.63
VARS-219ENST00000461328 TMEM208Q9BTX3 173 aa11.12□□□□□ -0.63
VARS-219ENST00000461328 RNF126Q9BV68 326 aa11.12□□□□□ -0.63
VARS-219ENST00000461328 SMIM3Q9BZL3 60 aa11.12□□□□□ -0.63
VARS-219ENST00000461328 MED28Q9H204 178 aa11.12□□□□□ -0.63
VARS-219ENST00000461328 ZNF331Q9NQX6 463 aaPredicted RBP11.12□□□□□ -0.63
VARS-219ENST00000461328 HSPB11Q9Y547 144 aa11.12□□□□□ -0.63
VARS-219ENST00000461328 C17orf112F2Z3M2 114 aa11.11□□□□□ -0.63
VARS-219ENST00000461328 AMBPP02760 352 aa11.11□□□□□ -0.63
VARS-219ENST00000461328 PRB4P10163 310 aaPredicted RBP11.11□□□□□ -0.63
VARS-219ENST00000461328 RPL12P30050 165 aaKnown RBP11.11□□□□□ -0.63
VARS-219ENST00000461328 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
VARS-219ENST00000461328 ZNF705AQ6ZN79 300 aaPredicted RBP11.11□□□□□ -0.63
VARS-219ENST00000461328 OR11H7Q8NGC8 314 aa11.11□□□□□ -0.63
VARS-219ENST00000461328 OR8A1Q8NGG7 326 aa11.11□□□□□ -0.63
VARS-219ENST00000461328 WDR61Q9GZS3 305 aaKnown RBP11.11□□□□□ -0.63
VARS-219ENST00000461328 HRH4Q9H3N8 390 aa11.11□□□□□ -0.63
VARS-219ENST00000461328 BOLA2-SMG1P6H3BVE0 249 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 M0R2Z0 102 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 SLC17A3O00476 420 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 INSP01308 110 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 IFNA5P01569 189 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 IGLC2P0DOY2 106 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 EMP1P54849 157 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 GUK1Q16774 197 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 GCSAMLQ5JQS6 135 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 AMTNQ6UX39 209 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 SCGB1C1Q8TD33 95 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 C2CD4CQ8TF44 421 aa11.1□□□□□ -0.63
VARS-219ENST00000461328 A8MTW9 85 aa11.09□□□□□ -0.63
VARS-219ENST00000461328 ZNF705FA8MVS1 300 aaPredicted RBP11.09□□□□□ -0.63
VARS-219ENST00000461328 H3BQ15 152 aa11.09□□□□□ -0.63
VARS-219ENST00000461328 HBE1P02100 147 aa11.09□□□□□ -0.63
VARS-219ENST00000461328 FCN2Q15485 313 aa11.09□□□□□ -0.63
VARS-219ENST00000461328 IGF2BP2-AS1Q96M15 143 aa11.09□□□□□ -0.63
VARS-219ENST00000461328 NEU1Q99519 415 aa11.09□□□□□ -0.63
VARS-219ENST00000461328 RFNGQ9Y644 331 aa11.09□□□□□ -0.63
VARS-219ENST00000461328 TMEM189A5PLL7 270 aa11.08□□□□□ -0.64
VARS-219ENST00000461328 SMIM9A6NGZ8 99 aa11.08□□□□□ -0.64
VARS-219ENST00000461328 C11orf94C9JXX5 98 aa11.08□□□□□ -0.64
VARS-219ENST00000461328 RGS21Q2M5E4 152 aa11.08□□□□□ -0.64
VARS-219ENST00000461328 BAP18Q8IXM2 172 aa11.08□□□□□ -0.64
VARS-219ENST00000461328 OR10J6PQ8NGY7 276 aa11.08□□□□□ -0.64
VARS-219ENST00000461328 BLNKQ8WV28 456 aa11.08□□□□□ -0.64
VARS-219ENST00000461328 CELA1Q9UNI1 258 aa11.08□□□□□ -0.64
VARS-219ENST00000461328 TIMM9Q9Y5J7 89 aa11.08□□□□□ -0.64
VARS-219ENST00000461328 TRAV12-2A0A075B6T6 113 aa11.07□□□□□ -0.64
VARS-219ENST00000461328 PYYP10082 97 aa11.07□□□□□ -0.64
VARS-219ENST00000461328 RRN3P1Q2M238 152 aa11.07□□□□□ -0.64
VARS-219ENST00000461328 FFAR4Q5NUL3 377 aa11.07□□□□□ -0.64
VARS-219ENST00000461328 Q6ZTC4 211 aa11.07□□□□□ -0.64
VARS-219ENST00000461328 ZNF767PQ75MW2 155 aa11.07□□□□□ -0.64
VARS-219ENST00000461328 MIR17HGQ75NE6 70 aa11.07□□□□□ -0.64
VARS-219ENST00000461328 C1orf158Q8N1D5 194 aa11.07□□□□□ -0.64
VARS-219ENST00000461328 MRPL32Q9BYC8 188 aaKnown RBP11.07□□□□□ -0.64
VARS-219ENST00000461328 ZNF586Q9NXT0 402 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms