RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 KNCNA6PVL3 124 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 A8MZ25 164 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 H3BTX0 84 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 SOCS3O14543 225 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 MRPS12O15235 138 aaKnown RBP5.38□□□□□ -1.55
RTN4-212ENST00000461004 CFDP00746 253 aaPredicted RBP5.38□□□□□ -1.55
RTN4-212ENST00000461004 PET100P0DJ07 73 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 RPL35AP18077 110 aaKnown RBP5.38□□□□□ -1.55
RTN4-212ENST00000461004 RPL29P47914 159 aaKnown RBP5.38□□□□□ -1.55
RTN4-212ENST00000461004 AP2S1P53680 142 aaPredicted RBP5.38□□□□□ -1.55
RTN4-212ENST00000461004 PAFAH1B2P68402 229 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 SPATA31B1PQ5VZV4 182 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 LINC00305Q7Z4B0 112 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 ZNF546Q86UE3 836 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 OR11H4Q8NGC9 324 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 GRAMD2BQ96HH9 432 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 ATP5SQ99766 215 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 NPCDR1Q9BY65 106 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 SLC39A9Q9NUM3 307 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 FBXL17Q9UF56 701 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 PXMP4Q9Y6I8 212 aa5.38□□□□□ -1.55
RTN4-212ENST00000461004 FXYD6-FXYD2A0A087WZ82 144 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 TRAV8-2A0A0B4J237 113 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 COX7A2P2O60397 106 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 HLA-DMBP28068 263 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 B2MP61769 119 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 RAB31Q13636 194 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 PSMG4Q5JS54 123 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 C1orf194Q5T5A4 169 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 GDF5OSQ5U4N7 250 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 C10orf113Q5VZT2 155 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 LINC00052Q96N35 136 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 AQP10Q96PS8 301 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 DNAJC4Q9NNZ3 241 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 NRN1Q9NPD7 142 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 TNFSF18Q9UNG2 199 aa5.37□□□□□ -1.55
RTN4-212ENST00000461004 NBEAL2Q6ZNJ1 2754 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 TRAV2A0A0B4J234 112 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 F6UB75 175 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 H3BQ15 152 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 CD5P06127 495 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 CD300CQ08708 224 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 FGL1Q08830 312 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 Q6ZRG5 221 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 MIR17HGQ75NE6 70 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 RNF182Q8N6D2 247 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 ST6GAL2Q96JF0 529 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 FAM110AQ9BQ89 295 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 TM2D3Q9BRN9 247 aa5.36□□□□□ -1.55
RTN4-212ENST00000461004 SEPSECSQ9HD40 501 aaKnown RBP5.36□□□□□ -1.55
RTN4-212ENST00000461004 LOC102724200A0A096LPH7 203 aaPredicted RBP5.35□□□□□ -1.55
RTN4-212ENST00000461004 SLC17A3O00476 420 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 ARPC5O15511 151 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 MPDU1O75352 247 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 IFNA5P01569 189 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 IGKV3-20P01619 116 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 GIG44P09565 113 aaPredicted RBP5.35□□□□□ -1.55
RTN4-212ENST00000461004 ZNF705DP0CH99 300 aaPredicted RBP5.35□□□□□ -1.55
RTN4-212ENST00000461004 ZNF705BP0CI00 300 aaPredicted RBP5.35□□□□□ -1.55
RTN4-212ENST00000461004 PYYP10082 97 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 NUP62P37198 522 aaPredicted RBP5.35□□□□□ -1.55
RTN4-212ENST00000461004 GALR1P47211 349 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 ACTL10Q5JWF8 245 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 FFAR4Q5NUL3 377 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 PXDC1Q5TGL8 231 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 RPL7L1Q6DKI1 246 aaKnown RBP5.35□□□□□ -1.55
RTN4-212ENST00000461004 HSD17B11Q8NBQ5 300 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 SCGB1C1Q8TD33 95 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 ASB13Q8WXK3 278 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 FAM167A-AS1Q96KT0 104 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 SLC25A2Q9BXI2 301 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 SH3BGRL3Q9H299 93 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 CYTL1Q9NRR1 136 aa5.35□□□□□ -1.55
RTN4-212ENST00000461004 COL7A1Q02388 2944 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 STAB2Q8WWQ8 2551 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 DNAH7Q8WXX0 4024 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 NHLRC4P0CG21 123 aaPredicted RBP5.34□□□□□ -1.55
RTN4-212ENST00000461004 IGLC2P0DOY2 106 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 RPL7P18124 248 aaKnown RBP5.34□□□□□ -1.55
RTN4-212ENST00000461004 CXCL2P19875 107 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 ATP6V0CP27449 155 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 CMC4P56277 68 aaPredicted RBP5.34□□□□□ -1.55
RTN4-212ENST00000461004 RAB2AP61019 212 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 FAM78BQ5VT40 261 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 TRPT1Q86TN4 253 aaKnown RBP5.34□□□□□ -1.55
RTN4-212ENST00000461004 ZNF709Q8N972 641 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 INO80EQ8NBZ0 244 aaPredicted RBP5.34□□□□□ -1.55
RTN4-212ENST00000461004 OR1L4Q8NGR5 311 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 RCHY1Q96PM5 261 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 OVOL2Q9BRP0 275 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 PARD6GQ9BYG4 376 aaPredicted RBP5.34□□□□□ -1.55
RTN4-212ENST00000461004 MFFQ9GZY8 342 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 ZNF586Q9NXT0 402 aa5.34□□□□□ -1.55
RTN4-212ENST00000461004 A0A087X0K7 114 aa5.33□□□□□ -1.56
RTN4-212ENST00000461004 ZNF705FA8MVS1 300 aaPredicted RBP5.33□□□□□ -1.56
RTN4-212ENST00000461004 PRAC2D3DTV9 90 aa5.33□□□□□ -1.56
RTN4-212ENST00000461004 C17orf112F2Z3M2 114 aa5.33□□□□□ -1.56
RTN4-212ENST00000461004 H3BMM0 161 aa5.33□□□□□ -1.56
RTN4-212ENST00000461004 ISLRO14498 428 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms