RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 FBLN5Q9UBX5 448 aa15.92■□□□□ 0.14
SNX27-204ENST00000458013 C1orf194Q5T5A4 169 aa15.92■□□□□ 0.14
SNX27-204ENST00000458013 Q86TA4 180 aa15.92■□□□□ 0.14
SNX27-204ENST00000458013 CYYR1Q96J86 154 aa15.91■□□□□ 0.14
SNX27-204ENST00000458013 ADCYAP1P18509 176 aa15.91■□□□□ 0.14
SNX27-204ENST00000458013 GATA4P43694 442 aa15.91■□□□□ 0.14
SNX27-204ENST00000458013 ZNF664Q8N3J9 261 aa15.91■□□□□ 0.14
SNX27-204ENST00000458013 DLX4Q92988 240 aaPredicted RBP15.91■□□□□ 0.14
SNX27-204ENST00000458013 TP53TG1Q9Y2A0 90 aa15.91■□□□□ 0.14
SNX27-204ENST00000458013 TNFRSF14Q92956 283 aa15.91■□□□□ 0.14
SNX27-204ENST00000458013 SS18Q15532 418 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 TMEM242Q9NWH2 141 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.9■□□□□ 0.14
SNX27-204ENST00000458013 ATP6V0E1O15342 81 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 RNASE2P10153 161 aaKnown RBP15.9■□□□□ 0.14
SNX27-204ENST00000458013 PYY3Q5JQD4 70 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 TMEM14EPQ6UXP3 125 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 ASXL3Q9C0F0 2248 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 THADAQ6YHU6 1953 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 GBF1Q92538 1859 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 F5H768 121 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 E7EQL1 145 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 NXPH4O95158 308 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 RPL32P62910 135 aaKnown RBP15.9■□□□□ 0.14
SNX27-204ENST00000458013 SMPXQ9UHP9 88 aa15.9■□□□□ 0.14
SNX27-204ENST00000458013 PTPRZ1P23471 2315 aaPredicted RBP15.89■□□□□ 0.14
SNX27-204ENST00000458013 G3V318 75 aa15.89■□□□□ 0.13
SNX27-204ENST00000458013 TRBV24-1A0A075B6N3 115 aa15.89■□□□□ 0.13
SNX27-204ENST00000458013 B4DSR2 109 aa15.89■□□□□ 0.13
SNX27-204ENST00000458013 EREGO14944 169 aa15.89■□□□□ 0.13
SNX27-204ENST00000458013 GHRHP01286 108 aa15.89■□□□□ 0.13
SNX27-204ENST00000458013 ANAPC10Q9UM13 185 aa15.89■□□□□ 0.13
SNX27-204ENST00000458013 PAX9P55771 341 aa15.89■□□□□ 0.13
SNX27-204ENST00000458013 PMVKQ15126 192 aa15.89■□□□□ 0.13
SNX27-204ENST00000458013 DLEU1O43261 78 aa15.88■□□□□ 0.13
SNX27-204ENST00000458013 SPINK8P0C7L1 97 aa15.88■□□□□ 0.13
SNX27-204ENST00000458013 RP1P56715 2156 aa15.88■□□□□ 0.13
SNX27-204ENST00000458013 RASL11AQ6T310 242 aa15.88■□□□□ 0.13
SNX27-204ENST00000458013 TET1Q8NFU7 2136 aa15.88■□□□□ 0.13
SNX27-204ENST00000458013 C9orf139Q6ZV77 190 aa15.87■□□□□ 0.13
SNX27-204ENST00000458013 QRFPP83859 136 aa15.87■□□□□ 0.13
SNX27-204ENST00000458013 GAGE6Q13070 117 aa15.87■□□□□ 0.13
SNX27-204ENST00000458013 TRAV25A0A0B4J276 109 aa15.87■□□□□ 0.13
SNX27-204ENST00000458013 FAM110DQ8TAY7 271 aaPredicted RBP15.87■□□□□ 0.13
SNX27-204ENST00000458013 FAM223BA6NKX1 122 aa15.87■□□□□ 0.13
SNX27-204ENST00000458013 FAM223AQ8IWN6 122 aa15.87■□□□□ 0.13
SNX27-204ENST00000458013 LIME1Q9H400 295 aa15.87■□□□□ 0.13
SNX27-204ENST00000458013 MYMXA0A1B0GTQ4 84 aa15.87■□□□□ 0.13
SNX27-204ENST00000458013 A0A1W2PPI3 338 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 B3GALT5-AS1P59052 145 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 MAJINQ3KP22 176 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 MINOS1Q5TGZ0 78 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 MINOS1-NBL1R4GNA1 71 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 GAGE12BA1L429 117 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 MBD3L4A6NDZ8 208 aaPredicted RBP15.86■□□□□ 0.13
SNX27-204ENST00000458013 MBD3L3A6NE82 208 aaPredicted RBP15.86■□□□□ 0.13
SNX27-204ENST00000458013 MBD3L5A6NJ08 208 aaPredicted RBP15.86■□□□□ 0.13
SNX27-204ENST00000458013 GAGE7O76087 117 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 GAGE12FP0CL80 117 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 GAGE12GP0CL81 117 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 GAGE12IP0CL82 117 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 MBD3L2Q8NHZ7 208 aaPredicted RBP15.86■□□□□ 0.13
SNX27-204ENST00000458013 WIPF3A6NGB9 483 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 LINC01356Q8N9X3 169 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 MRAPQ8TCY5 172 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 MORN5Q5VZ52 161 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 TRAV12-1A0A0B4J245 112 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 NDUFS8O00217 210 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 RS1O15537 224 aa15.86■□□□□ 0.13
SNX27-204ENST00000458013 POLR3KQ9Y2Y1 108 aaPredicted RBP15.85■□□□□ 0.13
SNX27-204ENST00000458013 COX11Q9Y6N1 276 aa15.85■□□□□ 0.13
SNX27-204ENST00000458013 Q96MF0 132 aa15.85■□□□□ 0.13
SNX27-204ENST00000458013 NDUFB8O95169 186 aa15.85■□□□□ 0.13
SNX27-204ENST00000458013 WISP1O95388 367 aa15.85■□□□□ 0.13
SNX27-204ENST00000458013 TEX36Q5VZQ5 186 aa15.85■□□□□ 0.13
SNX27-204ENST00000458013 MDS2Q8NDY4 140 aa15.85■□□□□ 0.13
SNX27-204ENST00000458013 CGB3P0DN86 165 aa15.84■□□□□ 0.13
SNX27-204ENST00000458013 SLC25A16P16260 332 aa15.84■□□□□ 0.13
SNX27-204ENST00000458013 DSCR9P59020 149 aa15.84■□□□□ 0.13
SNX27-204ENST00000458013 FAM120AOSQ5T036 256 aa15.84■□□□□ 0.13
SNX27-204ENST00000458013 C9JQL5 133 aa15.84■□□□□ 0.13
SNX27-204ENST00000458013 AZU1P20160 251 aa15.84■□□□□ 0.13
SNX27-204ENST00000458013 C3orf56Q8N813 242 aa15.84■□□□□ 0.13
SNX27-204ENST00000458013 ATP6V0BQ99437 205 aa15.84■□□□□ 0.13
SNX27-204ENST00000458013 M0R1W7 72 aa15.84■□□□□ 0.13
SNX27-204ENST00000458013 FAM231BA6NCW3 169 aa15.84■□□□□ 0.13
SNX27-204ENST00000458013 CSRP1P21291 193 aaKnown RBP15.83■□□□□ 0.13
SNX27-204ENST00000458013 TPSG1Q9NRR2 321 aa15.83■□□□□ 0.13
SNX27-204ENST00000458013 KLF12Q9Y4X4 402 aa15.83■□□□□ 0.12
SNX27-204ENST00000458013 GREB1LQ9C091 1923 aaPredicted RBP15.83■□□□□ 0.12
SNX27-204ENST00000458013 SPRY2O43597 315 aa15.83■□□□□ 0.12
SNX27-204ENST00000458013 SNHG12Q9BXW3 62 aa15.82■□□□□ 0.12
SNX27-204ENST00000458013 YLPM1P49750 1951 aaKnown RBP15.82■□□□□ 0.12
SNX27-204ENST00000458013 CACNA1IQ9P0X4 2223 aa15.82■□□□□ 0.12
SNX27-204ENST00000458013 SP5Q6BEB4 398 aaPredicted RBP15.82■□□□□ 0.12
SNX27-204ENST00000458013 UNQ6494/PRO21346Q6UXR6 183 aa15.82■□□□□ 0.12
SNX27-204ENST00000458013 SHANK2-AS3Q9BTD1 123 aa15.82■□□□□ 0.12
SNX27-204ENST00000458013 DAZ1Q9NQZ3 744 aaKnown RBP15.82■□□□□ 0.12
SNX27-204ENST00000458013 A0A1B0GW64 132 aa15.82■□□□□ 0.12
SNX27-204ENST00000458013 ANXA2RQ3ZCQ2 193 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms