RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
NIF3L1-209ENST00000454952 NAA50Q9GZZ1 169 aaKnown RBP5.62□□□□□ -1.51
NIF3L1-209ENST00000454952 CCDC59Q9P031 241 aaKnown RBP5.62□□□□□ -1.51
NIF3L1-209ENST00000454952 HIGD1AQ9Y241 93 aa5.62□□□□□ -1.51
NIF3L1-209ENST00000454952 STRAPQ9Y3F4 350 aaKnown RBP5.62□□□□□ -1.51
NIF3L1-209ENST00000454952 LINC00588Q9Y4M8 146 aa5.62□□□□□ -1.51
NIF3L1-209ENST00000454952 DNAH2Q9P225 4427 aa5.62□□□□□ -1.51
NIF3L1-209ENST00000454952 DNAH17Q9UFH2 4485 aa5.62□□□□□ -1.51
NIF3L1-209ENST00000454952 RYR1P21817 5038 aa5.62□□□□□ -1.51
NIF3L1-209ENST00000454952 A0A087X0K7 114 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 H3BRN7 92 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 H7BYZ3 331 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 IL5P05113 134 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 CXCL2P19875 107 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 M6PRP20645 277 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 CDKN1BP46527 198 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 HIST1H1AQ02539 215 aaPredicted RBP5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 SPANXN5Q5MJ07 72 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 SSX7Q7RTT5 188 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 TMED4Q7Z7H5 227 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 CCDC28AQ8IWP9 274 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 RNF182Q8N6D2 247 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 OR8A1Q8NGG7 326 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 TMEM263Q8WUH6 116 aaKnown RBP5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 DEDD2Q8WXF8 326 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 GNPNAT1Q96EK6 184 aaPredicted RBP5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 BCL7BQ9BQE9 202 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 SLC25A21Q9BQT8 299 aaPredicted RBP5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 SHANK2-AS3Q9BTD1 123 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 SLC25A39Q9BZJ4 359 aaPredicted RBP5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 Q9H8V8 135 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 DNAH11Q96DT5 4516 aa5.61□□□□□ -1.51
NIF3L1-209ENST00000454952 TRAV12-2A0A075B6T6 113 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 TRAV8-2A0A0B4J237 113 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 PLAC8L1A1L4L8 177 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 PRSS46E5RG02 174 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 H3BNG1 76 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 WRBO00258 174 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 HTN1P15515 57 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 PLP1P60201 277 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 PSG3Q16557 428 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 PXDC1Q5TGL8 231 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 CYP2G1PQ6ZSU1 146 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 ACOT7LQ6ZUV0 252 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 SPATA12Q7Z6I5 190 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 RXFP4Q8TDU9 374 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 RAB2BQ8WUD1 216 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 UPK3BQ9BT76 320 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 MRPS26Q9BYN8 205 aaKnown RBP5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 Q9H3A6 140 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 SCRT2Q9NQ03 307 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 PTTG2Q9NZH5 202 aa5.6□□□□□ -1.51
NIF3L1-209ENST00000454952 SMCO3A2RU48 225 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 FABP12A6NFH5 140 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 FNDC10F2Z333 226 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 NOL3O60936 208 aaKnown RBP5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 RLN2P04090 185 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 OR5G3P0C626 314 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 LINC00869P0C866 280 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 SMIM18P0DKX4 95 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 CXCL3P19876 107 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 AZU1P20160 251 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 UBE2MP61081 183 aaKnown RBP5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 OR5I1Q13606 314 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 SPCS2Q15005 226 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 LCE1DQ5T752 114 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 LCN15Q6UWW0 184 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 CCDC190Q86UF4 302 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 RNASE8Q8TDE3 154 aaKnown RBP5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 RPUSD4Q96CM3 377 aaKnown RBP5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 C17orf77Q96MU5 243 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 SLC50A1Q9BRV3 221 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 NOP10Q9NPE3 64 aaKnown RBP5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 PKD1P98161 4303 aa5.59□□□□□ -1.51
NIF3L1-209ENST00000454952 TRAV26-1A0A087WT03 109 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 SNURFLB1AK76 121 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 K7EPK0 472 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 SFT2D2O95562 160 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 PRM2P04554 102 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 ANXA7P20073 488 aaKnown RBP5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 GATA2P23769 480 aaPredicted RBP5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 TMBIM6P55061 237 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 DLK1P80370 383 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 FCN2Q15485 313 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 IGFL4Q6B9Z1 124 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 ZNF546Q86UE3 836 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 TOMM5Q8N4H5 51 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 LINC00612Q8N6U2 182 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 DYNC2LI1Q8TCX1 351 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 NPVFQ9HCQ7 196 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 MGAT4CQ9UBM8 478 aa5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 MRPS16Q9Y3D3 137 aaKnown RBP5.58□□□□□ -1.52
NIF3L1-209ENST00000454952 H3BP45 60 aa5.57□□□□□ -1.52
NIF3L1-209ENST00000454952 HOXB5P09067 269 aa5.57□□□□□ -1.52
NIF3L1-209ENST00000454952 TEPPQ6URK8 271 aa5.57□□□□□ -1.52
NIF3L1-209ENST00000454952 TMEM182Q6ZP80 229 aaPredicted RBP5.57□□□□□ -1.52
NIF3L1-209ENST00000454952 BPIFA4PQ86YQ2 179 aa5.57□□□□□ -1.52
NIF3L1-209ENST00000454952 OR10P1Q8NGE3 313 aa5.57□□□□□ -1.52
NIF3L1-209ENST00000454952 MCFD2Q8NI22 146 aa5.57□□□□□ -1.52
NIF3L1-209ENST00000454952 SMIM8Q96KF7 97 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms