RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 H3BMM0 161 aa8.33□□□□□ -1.08
HERC3-207ENST00000452979 BOLA2-SMG1P6H3BVE0 249 aa8.33□□□□□ -1.08
HERC3-207ENST00000452979 PFDN1O60925 122 aa8.33□□□□□ -1.08
HERC3-207ENST00000452979 NUP62P37198 522 aaPredicted RBP8.33□□□□□ -1.08
HERC3-207ENST00000452979 NKX2-5P52952 324 aaPredicted RBP8.33□□□□□ -1.08
HERC3-207ENST00000452979 OR2F1Q13607 317 aa8.33□□□□□ -1.08
HERC3-207ENST00000452979 TMEM182Q6ZP80 229 aaPredicted RBP8.33□□□□□ -1.08
HERC3-207ENST00000452979 C9orf62Q8N4C0 152 aa8.33□□□□□ -1.08
HERC3-207ENST00000452979 KCNRGQ8N5I3 272 aa8.33□□□□□ -1.08
HERC3-207ENST00000452979 HYLS1Q96M11 299 aa8.33□□□□□ -1.08
HERC3-207ENST00000452979 TRGV9Q99603 122 aa8.33□□□□□ -1.08
HERC3-207ENST00000452979 XCL2Q9UBD3 114 aa8.33□□□□□ -1.08
HERC3-207ENST00000452979 ZNF705FA8MVS1 300 aaPredicted RBP8.32□□□□□ -1.08
HERC3-207ENST00000452979 ZNF705DP0CH99 300 aaPredicted RBP8.32□□□□□ -1.08
HERC3-207ENST00000452979 ZNF705BP0CI00 300 aaPredicted RBP8.32□□□□□ -1.08
HERC3-207ENST00000452979 SPART-AS1P0CW21 52 aa8.32□□□□□ -1.08
HERC3-207ENST00000452979 GATA2P23769 480 aaPredicted RBP8.32□□□□□ -1.08
HERC3-207ENST00000452979 YPEL3P61236 119 aaPredicted RBP8.32□□□□□ -1.08
HERC3-207ENST00000452979 SNRPD3P62318 126 aaKnown RBP8.32□□□□□ -1.08
HERC3-207ENST00000452979 ATP6V1FQ16864 119 aa8.32□□□□□ -1.08
HERC3-207ENST00000452979 LGALSLQ3ZCW2 172 aaPredicted RBP8.32□□□□□ -1.08
HERC3-207ENST00000452979 RNF212Q495C1 297 aa8.32□□□□□ -1.08
HERC3-207ENST00000452979 TEPPQ6URK8 271 aa8.32□□□□□ -1.08
HERC3-207ENST00000452979 Q8WTZ3 238 aa8.32□□□□□ -1.08
HERC3-207ENST00000452979 WDR61Q9GZS3 305 aaKnown RBP8.32□□□□□ -1.08
HERC3-207ENST00000452979 NPVFQ9HCQ7 196 aa8.32□□□□□ -1.08
HERC3-207ENST00000452979 CYTL1Q9NRR1 136 aa8.32□□□□□ -1.08
HERC3-207ENST00000452979 TMEM189A5PLL7 270 aa8.31□□□□□ -1.08
HERC3-207ENST00000452979 AGPAT2O15120 278 aa8.31□□□□□ -1.08
HERC3-207ENST00000452979 BUB3O43684 328 aa8.31□□□□□ -1.08
HERC3-207ENST00000452979 TOMM40O96008 361 aa8.31□□□□□ -1.08
HERC3-207ENST00000452979 HNRNPCP07910 306 aaKnown RBP eCLIP8.31□□□□□ -1.08
HERC3-207ENST00000452979 PSG1P11464 419 aa8.31□□□□□ -1.08
HERC3-207ENST00000452979 FGF7P21781 194 aa8.31□□□□□ -1.08
HERC3-207ENST00000452979 SOHLH1Q5JUK2 328 aa8.31□□□□□ -1.08
HERC3-207ENST00000452979 RPL7L1Q6DKI1 246 aaKnown RBP8.31□□□□□ -1.08
HERC3-207ENST00000452979 CYP2G1PQ6ZSU1 146 aa8.31□□□□□ -1.08
HERC3-207ENST00000452979 RSG1Q9BU20 258 aa8.31□□□□□ -1.08
HERC3-207ENST00000452979 NPCDR1Q9BY65 106 aa8.31□□□□□ -1.08
HERC3-207ENST00000452979 IGLV2-18A0A075B6J9 118 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 A0A0D9SG52 128 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 BCL2L11O43521 198 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 HLA-DRB4P13762 266 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 CAMLGP49069 296 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 OPCMLQ14982 345 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 USF2Q15853 346 aaPredicted RBP8.3□□□□□ -1.08
HERC3-207ENST00000452979 TMUB2Q71RG4 321 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 ZNF575Q86XF7 245 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 BPIFCQ8NFQ6 507 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 CLUHP3Q96NS8 147 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 PARD6GQ9BYG4 376 aaPredicted RBP8.3□□□□□ -1.08
HERC3-207ENST00000452979 ARL6Q9H0F7 186 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 NRN1Q9NPD7 142 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 DKK2Q9UBU2 259 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 SLC45A2Q9UMX9 530 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 RFNGQ9Y644 331 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 HLA-DRB4X5D2U9 266 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 NACAE9PAV3 2078 aa8.3□□□□□ -1.08
HERC3-207ENST00000452979 LINC00869P0C866 280 aa8.29□□□□□ -1.08
HERC3-207ENST00000452979 RD3LP0DJH9 198 aa8.29□□□□□ -1.08
HERC3-207ENST00000452979 ZNF266Q14584 549 aa8.29□□□□□ -1.08
HERC3-207ENST00000452979 MIC13Q5XKP0 118 aa8.29□□□□□ -1.08
HERC3-207ENST00000452979 SIGLEC15Q6ZMC9 328 aa8.29□□□□□ -1.08
HERC3-207ENST00000452979 UBE2DNLQ8IWF7 75 aa8.29□□□□□ -1.08
HERC3-207ENST00000452979 RNF125Q96EQ8 232 aa8.29□□□□□ -1.08
HERC3-207ENST00000452979 ARPC5LQ9BPX5 153 aa8.29□□□□□ -1.08
HERC3-207ENST00000452979 NIPSNAP3BQ9BS92 247 aa8.29□□□□□ -1.08
HERC3-207ENST00000452979 SH3BGRL3Q9H299 93 aa8.29□□□□□ -1.08
HERC3-207ENST00000452979 LRP1BQ9NZR2 4599 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 TEX48A0A1B0GUV7 120 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 TAAR5O14804 337 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 MPDU1O75352 247 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 IFNA5P01569 189 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 IL4P05112 153 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 EMP1P54849 157 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 LYZP61626 148 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 C1orf134Q5TEV5 83 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 GDF5OSQ5U4N7 250 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 HSD17B11Q8NBQ5 300 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 OR51G1Q8NGK1 321 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 ARV1Q9H2C2 271 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 SAV1Q9H4B6 383 aaPredicted RBP8.28□□□□□ -1.08
HERC3-207ENST00000452979 DOK5Q9P104 306 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 BOLA1Q9Y3E2 137 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 PXMP4Q9Y6I8 212 aa8.28□□□□□ -1.08
HERC3-207ENST00000452979 KANTRA0A1W2PQU2 76 aa8.27□□□□□ -1.09
HERC3-207ENST00000452979 ATP6V0CP27449 155 aa8.27□□□□□ -1.09
HERC3-207ENST00000452979 RPL29P47914 159 aaKnown RBP8.27□□□□□ -1.09
HERC3-207ENST00000452979 FAM3BP58499 235 aaPredicted RBP8.27□□□□□ -1.09
HERC3-207ENST00000452979 SELENOTP62341 195 aa8.27□□□□□ -1.09
HERC3-207ENST00000452979 RAB31Q13636 194 aa8.27□□□□□ -1.09
HERC3-207ENST00000452979 GCSAMLQ5JQS6 135 aa8.27□□□□□ -1.09
HERC3-207ENST00000452979 FAM222AQ5U5X8 452 aa8.27□□□□□ -1.09
HERC3-207ENST00000452979 ZNF709Q8N972 641 aa8.27□□□□□ -1.09
HERC3-207ENST00000452979 SCGB1C1Q8TD33 95 aa8.27□□□□□ -1.09
HERC3-207ENST00000452979 ZNF471Q9BX82 626 aaPredicted RBP8.27□□□□□ -1.09
HERC3-207ENST00000452979 SLC39A9Q9NUM3 307 aa8.27□□□□□ -1.09
HERC3-207ENST00000452979 BORCS7-ASMTA0A0B4J1R7 106 aa8.26□□□□□ -1.09
HERC3-207ENST00000452979 CDK2AP2O75956 126 aa8.26□□□□□ -1.09
HERC3-207ENST00000452979 FABP1P07148 127 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 1179.7 ms