RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 CLUHP3Q96NS8 147 aa13.29□□□□□ -0.28
PDLIM2-214ENST00000452226 KRTAP17-1Q9BYP8 105 aa13.29□□□□□ -0.28
PDLIM2-214ENST00000452226 APLNQ9ULZ1 77 aa13.29□□□□□ -0.28
PDLIM2-214ENST00000452226 DNAH6Q9C0G6 4158 aa13.28□□□□□ -0.28
PDLIM2-214ENST00000452226 A0A087X0K7 114 aa13.28□□□□□ -0.28
PDLIM2-214ENST00000452226 TRAV8-2A0A0B4J237 113 aa13.28□□□□□ -0.28
PDLIM2-214ENST00000452226 MPDU1O75352 247 aa13.28□□□□□ -0.28
PDLIM2-214ENST00000452226 CXCL3P19876 107 aa13.28□□□□□ -0.28
PDLIM2-214ENST00000452226 NUTF2P61970 127 aaKnown RBP13.28□□□□□ -0.28
PDLIM2-214ENST00000452226 Q6ZRG5 221 aa13.28□□□□□ -0.28
PDLIM2-214ENST00000452226 Q6ZTC4 211 aa13.28□□□□□ -0.28
PDLIM2-214ENST00000452226 DNAJC4Q9NNZ3 241 aa13.28□□□□□ -0.28
PDLIM2-214ENST00000452226 COX7A2P2O60397 106 aa13.27□□□□□ -0.29
PDLIM2-214ENST00000452226 PET100P0DJ07 73 aa13.27□□□□□ -0.29
PDLIM2-214ENST00000452226 FGF7P21781 194 aa13.27□□□□□ -0.29
PDLIM2-214ENST00000452226 MORN5Q5VZ52 161 aa13.27□□□□□ -0.29
PDLIM2-214ENST00000452226 C10orf113Q5VZT2 155 aa13.27□□□□□ -0.29
PDLIM2-214ENST00000452226 SPATA31B1PQ5VZV4 182 aa13.27□□□□□ -0.29
PDLIM2-214ENST00000452226 C1QTNF4Q9BXJ3 329 aa13.27□□□□□ -0.29
PDLIM2-214ENST00000452226 RPRMQ9NS64 109 aa13.27□□□□□ -0.29
PDLIM2-214ENST00000452226 SLC39A9Q9NUM3 307 aa13.27□□□□□ -0.29
PDLIM2-214ENST00000452226 XCL2Q9UBD3 114 aa13.27□□□□□ -0.29
PDLIM2-214ENST00000452226 TRAV10A0A0B4J240 114 aa13.26□□□□□ -0.29
PDLIM2-214ENST00000452226 B2MP61769 119 aa13.26□□□□□ -0.29
PDLIM2-214ENST00000452226 OR1L4Q8NGR5 311 aa13.26□□□□□ -0.29
PDLIM2-214ENST00000452226 NPCDR1Q9BY65 106 aa13.26□□□□□ -0.29
PDLIM2-214ENST00000452226 PXMP4Q9Y6I8 212 aa13.26□□□□□ -0.29
PDLIM2-214ENST00000452226 A0A0J9YX75 114 aa13.25□□□□□ -0.29
PDLIM2-214ENST00000452226 A8MTW9 85 aa13.25□□□□□ -0.29
PDLIM2-214ENST00000452226 F6UB75 175 aa13.25□□□□□ -0.29
PDLIM2-214ENST00000452226 PFDN5Q99471 154 aa13.25□□□□□ -0.29
PDLIM2-214ENST00000452226 MBD2Q9UBB5 411 aa13.25□□□□□ -0.29
PDLIM2-214ENST00000452226 CELA1Q9UNI1 258 aa13.25□□□□□ -0.29
PDLIM2-214ENST00000452226 FGL1Q08830 312 aa13.24□□□□□ -0.29
PDLIM2-214ENST00000452226 CLINT1Q14677 625 aa13.24□□□□□ -0.29
PDLIM2-214ENST00000452226 FCN2Q15485 313 aa13.24□□□□□ -0.29
PDLIM2-214ENST00000452226 IGFL4Q6B9Z1 124 aa13.24□□□□□ -0.29
PDLIM2-214ENST00000452226 BPIFA4PQ86YQ2 179 aa13.24□□□□□ -0.29
PDLIM2-214ENST00000452226 OR11H7Q8NGC8 314 aa13.24□□□□□ -0.29
PDLIM2-214ENST00000452226 THAP6Q8TBB0 222 aa13.24□□□□□ -0.29
PDLIM2-214ENST00000452226 MED28Q9H204 178 aa13.24□□□□□ -0.29
PDLIM2-214ENST00000452226 HSPB11Q9Y547 144 aa13.24□□□□□ -0.29
PDLIM2-214ENST00000452226 IGHV4-4A0A075B6R2 117 aa13.23□□□□□ -0.29
PDLIM2-214ENST00000452226 CXCL2P19875 107 aa13.23□□□□□ -0.29
PDLIM2-214ENST00000452226 RPL12P30050 165 aaKnown RBP13.23□□□□□ -0.29
PDLIM2-214ENST00000452226 RGS21Q2M5E4 152 aa13.23□□□□□ -0.29
PDLIM2-214ENST00000452226 FAM78BQ5VT40 261 aa13.23□□□□□ -0.29
PDLIM2-214ENST00000452226 EBLN2Q6P2I7 272 aa13.23□□□□□ -0.29
PDLIM2-214ENST00000452226 ZNF709Q8N972 641 aa13.23□□□□□ -0.29
PDLIM2-214ENST00000452226 WDR61Q9GZS3 305 aaKnown RBP13.23□□□□□ -0.29
PDLIM2-214ENST00000452226 IGLC2P0DOY2 106 aa13.22□□□□□ -0.29
PDLIM2-214ENST00000452226 OXA1LQ15070 435 aa13.22□□□□□ -0.29
PDLIM2-214ENST00000452226 C12orf74Q32Q52 190 aa13.22□□□□□ -0.29
PDLIM2-214ENST00000452226 ZNF767PQ75MW2 155 aa13.22□□□□□ -0.29
PDLIM2-214ENST00000452226 RNF182Q8N6D2 247 aa13.22□□□□□ -0.29
PDLIM2-214ENST00000452226 OR4B1Q8NGF8 309 aa13.22□□□□□ -0.29
PDLIM2-214ENST00000452226 ATP5SQ99766 215 aa13.22□□□□□ -0.29
PDLIM2-214ENST00000452226 TRAV5A0A0B4J249 113 aa13.21□□□□□ -0.29
PDLIM2-214ENST00000452226 IGKV3-20P01619 116 aa13.21□□□□□ -0.29
PDLIM2-214ENST00000452226 PSG3Q16557 428 aa13.21□□□□□ -0.29
PDLIM2-214ENST00000452226 LCN15Q6UWW0 184 aa13.21□□□□□ -0.29
PDLIM2-214ENST00000452226 AMTNQ6UX39 209 aa13.21□□□□□ -0.29
PDLIM2-214ENST00000452226 ZNF331Q9NQX6 463 aaPredicted RBP13.21□□□□□ -0.29
PDLIM2-214ENST00000452226 DEFB131BA0A096LNP1 70 aa13.2□□□□□ -0.3
PDLIM2-214ENST00000452226 H3BQ15 152 aa13.2□□□□□ -0.3
PDLIM2-214ENST00000452226 PSG9Q00887 426 aa13.2□□□□□ -0.3
PDLIM2-214ENST00000452226 GCSAMLQ5JQS6 135 aa13.2□□□□□ -0.3
PDLIM2-214ENST00000452226 SAT2Q96F10 170 aaPredicted RBP13.2□□□□□ -0.3
PDLIM2-214ENST00000452226 SLC50A1Q9BRV3 221 aa13.2□□□□□ -0.3
PDLIM2-214ENST00000452226 DUSP14O95147 198 aaKnown RBP13.19□□□□□ -0.3
PDLIM2-214ENST00000452226 FXYD7P58549 80 aa13.19□□□□□ -0.3
PDLIM2-214ENST00000452226 ZNF705AQ6ZN79 300 aaPredicted RBP13.19□□□□□ -0.3
PDLIM2-214ENST00000452226 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
PDLIM2-214ENST00000452226 ASB13Q8WXK3 278 aa13.19□□□□□ -0.3
PDLIM2-214ENST00000452226 NEU1Q99519 415 aa13.19□□□□□ -0.3
PDLIM2-214ENST00000452226 SLC35B3Q9H1N7 401 aa13.19□□□□□ -0.3
PDLIM2-214ENST00000452226 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
PDLIM2-214ENST00000452226 TMEM14CQ9P0S9 112 aa13.19□□□□□ -0.3
PDLIM2-214ENST00000452226 HECTD4Q9Y4D8 3996 aa13.19□□□□□ -0.3
PDLIM2-214ENST00000452226 HERC2O95714 4834 aa13.19□□□□□ -0.3
PDLIM2-214ENST00000452226 IGHV3OR16-12A0A075B7B8 117 aa13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 ZNF705FA8MVS1 300 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 SLC17A3O00476 420 aa13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 AMBPP02760 352 aa13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 SNRPCP09234 159 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 GIPP09681 153 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 ZNF705DP0CH99 300 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 ZNF705BP0CI00 300 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 CNN1P51911 297 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 GUK1Q16774 197 aa13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 PARD6GQ9BYG4 376 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 WFDC1Q9HC57 220 aa13.18□□□□□ -0.3
PDLIM2-214ENST00000452226 EMP1P54849 157 aa13.17□□□□□ -0.3
PDLIM2-214ENST00000452226 OR8A1Q8NGG7 326 aa13.17□□□□□ -0.3
PDLIM2-214ENST00000452226 SMIM3Q9BZL3 60 aa13.17□□□□□ -0.3
PDLIM2-214ENST00000452226 ZNF586Q9NXT0 402 aa13.17□□□□□ -0.3
PDLIM2-214ENST00000452226 TMEM189A5PLL7 270 aa13.16□□□□□ -0.3
PDLIM2-214ENST00000452226 SMIM9A6NGZ8 99 aa13.16□□□□□ -0.3
PDLIM2-214ENST00000452226 C17orf112F2Z3M2 114 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms