RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 INAFM2P0DMQ5 153 aa11.32□□□□□ -0.6
ITGB4-202ENST00000449880 TRGV4A0A0C4DH28 118 aa11.32□□□□□ -0.6
ITGB4-202ENST00000449880 AZU1P20160 251 aa11.32□□□□□ -0.6
ITGB4-202ENST00000449880 FAM104BQ5XKR9 115 aa11.32□□□□□ -0.6
ITGB4-202ENST00000449880 PSPNO60542 156 aa11.32□□□□□ -0.6
ITGB4-202ENST00000449880 IGKV2-40A0A087WW87 121 aaPredicted RBP11.31□□□□□ -0.6
ITGB4-202ENST00000449880 IGKV2D-40P01614 121 aaPredicted RBP11.31□□□□□ -0.6
ITGB4-202ENST00000449880 EFNA4P52798 201 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 C20orf204Q6ZNR8 217 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 C9orf139Q6ZV77 190 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 CEND1Q8N111 149 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 TMEM141Q96I45 108 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 TRAV3A0A0B4J244 114 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 EDA2RQ9HAV5 297 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 LY6G6EA0A0G2JKS1 128 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 H0YJW9 148 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 TIMM23O14925 209 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 B3GALT5-AS1P59052 145 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 TMEM86BQ8N661 226 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 RASL10AQ92737 203 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 U3KQA8 63 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 TRAV40A0A0B4J280 105 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 CRPP02741 224 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 UTF1Q5T230 341 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 SIGLEC15Q6ZMC9 328 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 LINC00477Q96M19 166 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 CSTL1Q9H114 145 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 MYMXA0A1B0GTQ4 84 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 ZNF688P0C7X2 276 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 RALGAPA1Q6GYQ0 2036 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 ALPK2Q86TB3 2170 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 AMN1Q8IY45 258 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 DNAJC30Q96LL9 226 aa11.31□□□□□ -0.6
ITGB4-202ENST00000449880 ESPL1Q14674 2120 aa11.3□□□□□ -0.6
ITGB4-202ENST00000449880 PAX8Q06710 450 aa11.3□□□□□ -0.6
ITGB4-202ENST00000449880 OOSP1A8MZH6 123 aa11.3□□□□□ -0.6
ITGB4-202ENST00000449880 IGHV1-46P01743 117 aa11.3□□□□□ -0.6
ITGB4-202ENST00000449880 ZCCHC24Q8N2G6 241 aaKnown RBP11.3□□□□□ -0.6
ITGB4-202ENST00000449880 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.3□□□□□ -0.6
ITGB4-202ENST00000449880 ETV2O00321 342 aaPredicted RBP11.3□□□□□ -0.6
ITGB4-202ENST00000449880 VGLL1Q99990 258 aa11.3□□□□□ -0.6
ITGB4-202ENST00000449880 FOXG1P55316 489 aaPredicted RBP11.3□□□□□ -0.6
ITGB4-202ENST00000449880 SHANK2-AS3Q9BTD1 123 aa11.3□□□□□ -0.6
ITGB4-202ENST00000449880 LYNX1G3V0Z9 82 aa11.29□□□□□ -0.6
ITGB4-202ENST00000449880 LYNX1P0DP58 116 aa11.29□□□□□ -0.6
ITGB4-202ENST00000449880 ZNF672Q499Z4 452 aaPredicted RBP11.29□□□□□ -0.6
ITGB4-202ENST00000449880 GLMPQ8WWB7 406 aa11.29□□□□□ -0.6
ITGB4-202ENST00000449880 TMEM14BQ9NUH8 114 aa11.29□□□□□ -0.6
ITGB4-202ENST00000449880 PLXNB3Q9ULL4 1909 aa11.29□□□□□ -0.6
ITGB4-202ENST00000449880 CD177Q8N6Q3 437 aa11.29□□□□□ -0.6
ITGB4-202ENST00000449880 CACNA1GO43497 2377 aa11.29□□□□□ -0.6
ITGB4-202ENST00000449880 TRAV41A0A0B4J266 112 aa11.29□□□□□ -0.6
ITGB4-202ENST00000449880 ARMS2P0C7Q2 107 aa11.29□□□□□ -0.6
ITGB4-202ENST00000449880 PPIFP30405 207 aaKnown RBP11.29□□□□□ -0.6
ITGB4-202ENST00000449880 FANCMQ8IYD8 2048 aa11.29□□□□□ -0.6
ITGB4-202ENST00000449880 IGKV1-6A0A0C4DH72 117 aa11.29□□□□□ -0.6
ITGB4-202ENST00000449880 CCL25O15444 150 aa11.28□□□□□ -0.6
ITGB4-202ENST00000449880 CD24P25063 80 aa11.28□□□□□ -0.6
ITGB4-202ENST00000449880 AKAP6Q13023 2319 aa11.28□□□□□ -0.6
ITGB4-202ENST00000449880 C5orf63A6NC05 138 aa11.28□□□□□ -0.6
ITGB4-202ENST00000449880 NSUN5P1Q3KNT7 163 aa11.28□□□□□ -0.6
ITGB4-202ENST00000449880 MDS2Q8NDY4 140 aa11.28□□□□□ -0.6
ITGB4-202ENST00000449880 CEP250Q9BV73 2442 aa11.28□□□□□ -0.6
ITGB4-202ENST00000449880 C1QTNF4Q9BXJ3 329 aa11.28□□□□□ -0.6
ITGB4-202ENST00000449880 CACNA1EQ15878 2313 aa11.27□□□□□ -0.6
ITGB4-202ENST00000449880 B4DSR2 109 aa11.27□□□□□ -0.6
ITGB4-202ENST00000449880 CDPF1Q6NVV7 123 aa11.27□□□□□ -0.6
ITGB4-202ENST00000449880 LHFPL4Q7Z7J7 247 aa11.27□□□□□ -0.6
ITGB4-202ENST00000449880 LTBP2Q14767 1821 aa11.27□□□□□ -0.6
ITGB4-202ENST00000449880 ETDBQ3ZM63 59 aa11.27□□□□□ -0.61
ITGB4-202ENST00000449880 MINOS1Q5TGZ0 78 aa11.27□□□□□ -0.61
ITGB4-202ENST00000449880 TMEM14CQ9P0S9 112 aa11.27□□□□□ -0.61
ITGB4-202ENST00000449880 MINOS1-NBL1R4GNA1 71 aa11.27□□□□□ -0.61
ITGB4-202ENST00000449880 FCN3O75636 299 aa11.27□□□□□ -0.61
ITGB4-202ENST00000449880 CYYR1Q96J86 154 aa11.27□□□□□ -0.61
ITGB4-202ENST00000449880 LMO1P25800 156 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 VWC2Q2TAL6 325 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
ITGB4-202ENST00000449880 TIMM21Q9BVV7 248 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 GAGE12JA6NER3 117 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 LEPROTO15243 131 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 GAGE7O76087 117 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 GAGE12FP0CL80 117 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 GAGE12GP0CL81 117 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 GAGE12IP0CL82 117 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 GAGE4Q13068 117 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 GAGE5Q13069 117 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 GAGE6Q13070 117 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 PRB3Q04118 309 aaPredicted RBP11.26□□□□□ -0.61
ITGB4-202ENST00000449880 CHCHD5Q9BSY4 110 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 ZNF581Q9P0T4 197 aa11.26□□□□□ -0.61
ITGB4-202ENST00000449880 HIST1H4AP62805 103 aaKnown RBP11.25□□□□□ -0.61
ITGB4-202ENST00000449880 C11orf44Q8N8P7 122 aa11.25□□□□□ -0.61
ITGB4-202ENST00000449880 ZNF524Q96C55 264 aa11.25□□□□□ -0.61
ITGB4-202ENST00000449880 WISP1O95388 367 aa11.25□□□□□ -0.61
ITGB4-202ENST00000449880 CITED1Q99966 193 aa11.25□□□□□ -0.61
ITGB4-202ENST00000449880 PRADC1Q9BSG0 188 aa11.25□□□□□ -0.61
ITGB4-202ENST00000449880 SAP30O75446 220 aa11.24□□□□□ -0.61
ITGB4-202ENST00000449880 IGHV1-8P0DP01 117 aa11.24□□□□□ -0.61
ITGB4-202ENST00000449880 C3orf36Q3SXR2 165 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms