RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 LINC00299Q6ZSB3 139 aa12.66□□□□□ -0.38
DDX56-207ENST00000448192 S100ZQ8WXG8 99 aa12.66□□□□□ -0.38
DDX56-207ENST00000448192 DKK2Q9UBU2 259 aa12.66□□□□□ -0.38
DDX56-207ENST00000448192 AMBPP02760 352 aa12.65□□□□□ -0.38
DDX56-207ENST00000448192 SNRPCP09234 159 aaKnown RBP12.65□□□□□ -0.38
DDX56-207ENST00000448192 PRB4P10163 310 aaPredicted RBP12.65□□□□□ -0.38
DDX56-207ENST00000448192 CXCL3P19876 107 aa12.65□□□□□ -0.38
DDX56-207ENST00000448192 RAB31Q13636 194 aa12.65□□□□□ -0.38
DDX56-207ENST00000448192 PSG3Q16557 428 aa12.65□□□□□ -0.38
DDX56-207ENST00000448192 FAM222AQ5U5X8 452 aa12.65□□□□□ -0.38
DDX56-207ENST00000448192 C11orf1Q9H5F2 150 aa12.65□□□□□ -0.38
DDX56-207ENST00000448192 PLA2G2EQ9NZK7 142 aa12.65□□□□□ -0.38
DDX56-207ENST00000448192 MRPS12O15235 138 aaKnown RBP12.64□□□□□ -0.39
DDX56-207ENST00000448192 INSP01308 110 aa12.64□□□□□ -0.39
DDX56-207ENST00000448192 CAMLGP49069 296 aa12.64□□□□□ -0.39
DDX56-207ENST00000448192 RHOBP62745 196 aa12.64□□□□□ -0.39
DDX56-207ENST00000448192 HIST1H1AQ02539 215 aaPredicted RBP12.64□□□□□ -0.39
DDX56-207ENST00000448192 C10orf113Q5VZT2 155 aa12.64□□□□□ -0.39
DDX56-207ENST00000448192 NRARPQ7Z6K4 114 aa12.64□□□□□ -0.39
DDX56-207ENST00000448192 TMEM37Q8WXS4 190 aa12.64□□□□□ -0.39
DDX56-207ENST00000448192 NIPSNAP3BQ9BS92 247 aa12.64□□□□□ -0.39
DDX56-207ENST00000448192 NDUFAF3Q9BU61 184 aa12.64□□□□□ -0.39
DDX56-207ENST00000448192 UQCC1Q9NVA1 299 aa12.64□□□□□ -0.39
DDX56-207ENST00000448192 PPP1R14DQ9NXH3 145 aa12.64□□□□□ -0.39
DDX56-207ENST00000448192 YTHDF2Q9Y5A9 579 aaKnown RBP12.64□□□□□ -0.39
DDX56-207ENST00000448192 TEX48A0A1B0GUV7 120 aa12.63□□□□□ -0.39
DDX56-207ENST00000448192 ASAH1Q13510 395 aa12.63□□□□□ -0.39
DDX56-207ENST00000448192 RAB32Q13637 225 aa12.63□□□□□ -0.39
DDX56-207ENST00000448192 BPIFA4PQ86YQ2 179 aa12.63□□□□□ -0.39
DDX56-207ENST00000448192 BAP18Q8IXM2 172 aa12.63□□□□□ -0.39
DDX56-207ENST00000448192 OR8A1Q8NGG7 326 aa12.63□□□□□ -0.39
DDX56-207ENST00000448192 TRAV12-2A0A075B6T6 113 aa12.62□□□□□ -0.39
DDX56-207ENST00000448192 ZNF705GA8MUZ8 300 aaPredicted RBP12.62□□□□□ -0.39
DDX56-207ENST00000448192 H3BTX0 84 aa12.62□□□□□ -0.39
DDX56-207ENST00000448192 BOLA2-SMG1P6H3BVE0 249 aa12.62□□□□□ -0.39
DDX56-207ENST00000448192 CRXO43186 299 aaPredicted RBP12.62□□□□□ -0.39
DDX56-207ENST00000448192 HTN3P15516 51 aa12.62□□□□□ -0.39
DDX56-207ENST00000448192 MORN5Q5VZ52 161 aa12.62□□□□□ -0.39
DDX56-207ENST00000448192 MIC13Q5XKP0 118 aa12.62□□□□□ -0.39
DDX56-207ENST00000448192 LCN15Q6UWW0 184 aa12.62□□□□□ -0.39
DDX56-207ENST00000448192 Q6ZRG5 221 aa12.62□□□□□ -0.39
DDX56-207ENST00000448192 STX12Q86Y82 276 aa12.62□□□□□ -0.39
DDX56-207ENST00000448192 ENKURQ8TC29 256 aa12.62□□□□□ -0.39
DDX56-207ENST00000448192 RPUSD4Q96CM3 377 aaKnown RBP12.62□□□□□ -0.39
DDX56-207ENST00000448192 LYRM2Q9NU23 88 aaPredicted RBP12.62□□□□□ -0.39
DDX56-207ENST00000448192 UBE2L5PA0A1B0GUS4 154 aa12.61□□□□□ -0.39
DDX56-207ENST00000448192 IGSF23A1L1A6 192 aa12.61□□□□□ -0.39
DDX56-207ENST00000448192 PRM2P04554 102 aa12.61□□□□□ -0.39
DDX56-207ENST00000448192 CXCL2P19875 107 aa12.61□□□□□ -0.39
DDX56-207ENST00000448192 S100A11P31949 105 aa12.61□□□□□ -0.39
DDX56-207ENST00000448192 SULT1A1P50225 295 aa12.61□□□□□ -0.39
DDX56-207ENST00000448192 IL15RAQ13261 267 aa12.61□□□□□ -0.39
DDX56-207ENST00000448192 OPCMLQ14982 345 aa12.61□□□□□ -0.39
DDX56-207ENST00000448192 DNAJC4Q9NNZ3 241 aa12.61□□□□□ -0.39
DDX56-207ENST00000448192 ZNF331Q9NQX6 463 aaPredicted RBP12.61□□□□□ -0.39
DDX56-207ENST00000448192 WDR83OSQ9Y284 106 aa12.61□□□□□ -0.39
DDX56-207ENST00000448192 UPK1BO75841 260 aa12.6□□□□□ -0.39
DDX56-207ENST00000448192 DAD1P61803 113 aa12.6□□□□□ -0.39
DDX56-207ENST00000448192 HBG1P69891 147 aa12.6□□□□□ -0.39
DDX56-207ENST00000448192 HBG2P69892 147 aa12.6□□□□□ -0.39
DDX56-207ENST00000448192 BAXQ07812 192 aa12.6□□□□□ -0.39
DDX56-207ENST00000448192 TMEM252Q8N6L7 170 aa12.6□□□□□ -0.39
DDX56-207ENST00000448192 OR1L4Q8NGR5 311 aa12.6□□□□□ -0.39
DDX56-207ENST00000448192 SLC50A1Q9BRV3 221 aa12.6□□□□□ -0.39
DDX56-207ENST00000448192 GPN1Q9HCN4 374 aaPredicted RBP12.6□□□□□ -0.39
DDX56-207ENST00000448192 SLC17A3O00476 420 aa12.59□□□□□ -0.39
DDX56-207ENST00000448192 P0DMU3 169 aa12.59□□□□□ -0.39
DDX56-207ENST00000448192 FAM231AP0DMU4 169 aa12.59□□□□□ -0.39
DDX56-207ENST00000448192 FAM231CP0DMU5 169 aa12.59□□□□□ -0.39
DDX56-207ENST00000448192 B2MP61769 119 aa12.59□□□□□ -0.39
DDX56-207ENST00000448192 OXA1LQ15070 435 aa12.59□□□□□ -0.39
DDX56-207ENST00000448192 VWC2Q2TAL6 325 aa12.59□□□□□ -0.39
DDX56-207ENST00000448192 LINC01587Q99440 93 aa12.59□□□□□ -0.39
DDX56-207ENST00000448192 TRAV5A0A0B4J249 113 aa12.58□□□□□ -0.4
DDX56-207ENST00000448192 A6NHS1 94 aa12.58□□□□□ -0.4
DDX56-207ENST00000448192 SIX6O95475 246 aa12.58□□□□□ -0.4
DDX56-207ENST00000448192 PFDN5Q99471 154 aa12.58□□□□□ -0.4
DDX56-207ENST00000448192 DNAH2Q9P225 4427 aa12.58□□□□□ -0.4
DDX56-207ENST00000448192 H3BQ15 152 aa12.57□□□□□ -0.4
DDX56-207ENST00000448192 IGLC2P0DOY2 106 aa12.57□□□□□ -0.4
DDX56-207ENST00000448192 HTN1P15515 57 aa12.57□□□□□ -0.4
DDX56-207ENST00000448192 AZU1P20160 251 aa12.57□□□□□ -0.4
DDX56-207ENST00000448192 FGF7P21781 194 aa12.57□□□□□ -0.4
DDX56-207ENST00000448192 RPL29P47914 159 aaKnown RBP12.57□□□□□ -0.4
DDX56-207ENST00000448192 ATP6V1FQ16864 119 aa12.57□□□□□ -0.4
DDX56-207ENST00000448192 POM121L12Q8N7R1 296 aa12.57□□□□□ -0.4
DDX56-207ENST00000448192 FAM210BQ96KR6 192 aa12.57□□□□□ -0.4
DDX56-207ENST00000448192 SLC39A9Q9NUM3 307 aa12.57□□□□□ -0.4
DDX56-207ENST00000448192 PXMP4Q9Y6I8 212 aa12.57□□□□□ -0.4
DDX56-207ENST00000448192 PRAC2D3DTV9 90 aa12.56□□□□□ -0.4
DDX56-207ENST00000448192 CDKN1BP46527 198 aa12.56□□□□□ -0.4
DDX56-207ENST00000448192 IFITM3Q01628 133 aa12.56□□□□□ -0.4
DDX56-207ENST00000448192 TMEM256Q8N2U0 113 aa12.56□□□□□ -0.4
DDX56-207ENST00000448192 OR10J6PQ8NGY7 276 aa12.56□□□□□ -0.4
DDX56-207ENST00000448192 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
DDX56-207ENST00000448192 LYRM9A8MSI8 78 aa12.55□□□□□ -0.4
DDX56-207ENST00000448192 RLN2P04090 185 aa12.55□□□□□ -0.4
DDX56-207ENST00000448192 DEFB130BP0DP73 79 aa12.55□□□□□ -0.4
DDX56-207ENST00000448192 DEFB130AP0DP74 79 aa12.55□□□□□ -0.4
DDX56-207ENST00000448192 TSPOP30536 169 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms