RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 VAMP2P63027 116 aa14.74□□□□□ -0.05
SDC1-205ENST00000447124 IL15RAQ13261 267 aa14.74□□□□□ -0.05
SDC1-205ENST00000447124 ZNF846Q147U1 533 aa14.74□□□□□ -0.05
SDC1-205ENST00000447124 MORN5Q5VZ52 161 aa14.74□□□□□ -0.05
SDC1-205ENST00000447124 LINC00305Q7Z4B0 112 aa14.74□□□□□ -0.05
SDC1-205ENST00000447124 OR8A1Q8NGG7 326 aa14.74□□□□□ -0.05
SDC1-205ENST00000447124 C2orf50Q96LR7 162 aa14.74□□□□□ -0.05
SDC1-205ENST00000447124 HECTD4Q9Y4D8 3996 aa14.74□□□□□ -0.05
SDC1-205ENST00000447124 C5orf51A6NDU8 294 aa14.73□□□□□ -0.05
SDC1-205ENST00000447124 CST7O76096 145 aa14.73□□□□□ -0.05
SDC1-205ENST00000447124 H2AFB2P0C5Z0 115 aa14.73□□□□□ -0.05
SDC1-205ENST00000447124 OXA1LQ15070 435 aa14.73□□□□□ -0.05
SDC1-205ENST00000447124 PXDC1Q5TGL8 231 aa14.73□□□□□ -0.05
SDC1-205ENST00000447124 ZNF546Q86UE3 836 aa14.73□□□□□ -0.05
SDC1-205ENST00000447124 TMEM208Q9BTX3 173 aa14.73□□□□□ -0.05
SDC1-205ENST00000447124 CCDC32Q9BV29 185 aa14.73□□□□□ -0.05
SDC1-205ENST00000447124 TRAV12-2A0A075B6T6 113 aa14.72□□□□□ -0.05
SDC1-205ENST00000447124 AZU1P20160 251 aa14.72□□□□□ -0.05
SDC1-205ENST00000447124 BCAP31P51572 246 aa14.72□□□□□ -0.05
SDC1-205ENST00000447124 HIST1H1AQ02539 215 aaPredicted RBP14.72□□□□□ -0.05
SDC1-205ENST00000447124 BAP18Q8IXM2 172 aa14.72□□□□□ -0.05
SDC1-205ENST00000447124 POM121L12Q8N7R1 296 aa14.72□□□□□ -0.05
SDC1-205ENST00000447124 S100A7AQ86SG5 101 aa14.71□□□□□ -0.05
SDC1-205ENST00000447124 LRRC20Q8TCA0 184 aa14.71□□□□□ -0.05
SDC1-205ENST00000447124 ZNF331Q9NQX6 463 aaPredicted RBP14.71□□□□□ -0.05
SDC1-205ENST00000447124 TEX48A0A1B0GUV7 120 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 FAM240BA0A1B0GVZ2 78 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 H3BTX0 84 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 BOLA2-SMG1P6H3BVE0 249 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 INSP01308 110 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 P0DMU3 169 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 FAM231AP0DMU4 169 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 FAM231CP0DMU5 169 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 HTN3P15516 51 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 CAV2P51636 162 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 RHOBP62745 196 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 OPCMLQ14982 345 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 MIC13Q5XKP0 118 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 RPUSD4Q96CM3 377 aaKnown RBP14.7□□□□□ -0.06
SDC1-205ENST00000447124 WDR83OSQ9Y284 106 aa14.7□□□□□ -0.06
SDC1-205ENST00000447124 TRAV5A0A0B4J249 113 aa14.69□□□□□ -0.06
SDC1-205ENST00000447124 PLAC8L1A1L4L8 177 aa14.69□□□□□ -0.06
SDC1-205ENST00000447124 COX7A2P2O60397 106 aa14.69□□□□□ -0.06
SDC1-205ENST00000447124 CAMLGP49069 296 aa14.69□□□□□ -0.06
SDC1-205ENST00000447124 RAB32Q13637 225 aa14.69□□□□□ -0.06
SDC1-205ENST00000447124 NRARPQ7Z6K4 114 aa14.69□□□□□ -0.06
SDC1-205ENST00000447124 FAM210BQ96KR6 192 aa14.69□□□□□ -0.06
SDC1-205ENST00000447124 DNAJC4Q9NNZ3 241 aa14.69□□□□□ -0.06
SDC1-205ENST00000447124 IGSF23A1L1A6 192 aa14.68□□□□□ -0.06
SDC1-205ENST00000447124 PRAC2D3DTV9 90 aa14.68□□□□□ -0.06
SDC1-205ENST00000447124 H3BQ15 152 aa14.68□□□□□ -0.06
SDC1-205ENST00000447124 SLC17A3O00476 420 aa14.68□□□□□ -0.06
SDC1-205ENST00000447124 FCN2Q15485 313 aa14.68□□□□□ -0.06
SDC1-205ENST00000447124 VWC2Q2TAL6 325 aa14.68□□□□□ -0.06
SDC1-205ENST00000447124 C10orf113Q5VZT2 155 aa14.68□□□□□ -0.06
SDC1-205ENST00000447124 LINC00299Q6ZSB3 139 aa14.68□□□□□ -0.06
SDC1-205ENST00000447124 BPIFA4PQ86YQ2 179 aa14.68□□□□□ -0.06
SDC1-205ENST00000447124 TMEM252Q8N6L7 170 aa14.68□□□□□ -0.06
SDC1-205ENST00000447124 RNF24Q9Y225 148 aa14.68□□□□□ -0.06
SDC1-205ENST00000447124 IGLC2P0DOY2 106 aa14.67□□□□□ -0.06
SDC1-205ENST00000447124 CXCL2P19875 107 aa14.67□□□□□ -0.06
SDC1-205ENST00000447124 DAD1P61803 113 aa14.67□□□□□ -0.06
SDC1-205ENST00000447124 KIR3DS1Q14943 382 aa14.67□□□□□ -0.06
SDC1-205ENST00000447124 LCN15Q6UWW0 184 aa14.67□□□□□ -0.06
SDC1-205ENST00000447124 SAT2Q96F10 170 aaPredicted RBP14.67□□□□□ -0.06
SDC1-205ENST00000447124 LINC01587Q99440 93 aa14.67□□□□□ -0.06
SDC1-205ENST00000447124 LYRM2Q9NU23 88 aaPredicted RBP14.67□□□□□ -0.06
SDC1-205ENST00000447124 UQCC1Q9NVA1 299 aa14.67□□□□□ -0.06
SDC1-205ENST00000447124 KIAA1109Q2LD37 5005 aa14.66□□□□□ -0.06
SDC1-205ENST00000447124 TSPOP30536 169 aa14.66□□□□□ -0.06
SDC1-205ENST00000447124 SULT1A1P50225 295 aa14.66□□□□□ -0.06
SDC1-205ENST00000447124 S100A10P60903 97 aa14.66□□□□□ -0.06
SDC1-205ENST00000447124 B2MP61769 119 aa14.66□□□□□ -0.06
SDC1-205ENST00000447124 ASAH1Q13510 395 aa14.66□□□□□ -0.06
SDC1-205ENST00000447124 SLC50A1Q9BRV3 221 aa14.66□□□□□ -0.06
SDC1-205ENST00000447124 PPP1R14DQ9NXH3 145 aa14.66□□□□□ -0.06
SDC1-205ENST00000447124 M0R2N4 97 aa14.65□□□□□ -0.06
SDC1-205ENST00000447124 PVALBP20472 110 aaPredicted RBP14.65□□□□□ -0.06
SDC1-205ENST00000447124 IFITM3Q01628 133 aa14.65□□□□□ -0.06
SDC1-205ENST00000447124 RAB31Q13636 194 aa14.65□□□□□ -0.06
SDC1-205ENST00000447124 MZT2BQ6NZ67 158 aa14.65□□□□□ -0.06
SDC1-205ENST00000447124 TMEM88Q6PEY1 159 aa14.65□□□□□ -0.06
SDC1-205ENST00000447124 Q6ZRG5 221 aa14.65□□□□□ -0.06
SDC1-205ENST00000447124 PARD6GQ9BYG4 376 aaPredicted RBP14.65□□□□□ -0.06
SDC1-205ENST00000447124 DYNC1H1Q14204 4646 aaKnown RBP14.65□□□□□ -0.06
SDC1-205ENST00000447124 LYRM9A8MSI8 78 aa14.64□□□□□ -0.07
SDC1-205ENST00000447124 S100A11P31949 105 aa14.64□□□□□ -0.07
SDC1-205ENST00000447124 RPL29P47914 159 aaKnown RBP14.64□□□□□ -0.07
SDC1-205ENST00000447124 CHAC2Q8WUX2 184 aa14.64□□□□□ -0.07
SDC1-205ENST00000447124 S100ZQ8WXG8 99 aa14.64□□□□□ -0.07
SDC1-205ENST00000447124 SLC39A9Q9NUM3 307 aa14.64□□□□□ -0.07
SDC1-205ENST00000447124 SIX6O95475 246 aa14.63□□□□□ -0.07
SDC1-205ENST00000447124 DEFB130BP0DP73 79 aa14.63□□□□□ -0.07
SDC1-205ENST00000447124 DEFB130AP0DP74 79 aa14.63□□□□□ -0.07
SDC1-205ENST00000447124 CDKN1BP46527 198 aa14.63□□□□□ -0.07
SDC1-205ENST00000447124 TAS2R60P59551 318 aa14.63□□□□□ -0.07
SDC1-205ENST00000447124 ZNF586Q9NXT0 402 aa14.63□□□□□ -0.07
SDC1-205ENST00000447124 UBE2L5PA0A1B0GUS4 154 aa14.62□□□□□ -0.07
SDC1-205ENST00000447124 A6NHS1 94 aa14.62□□□□□ -0.07
SDC1-205ENST00000447124 TMEM256Q8N2U0 113 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms