RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 WDR61Q9GZS3 305 aaKnown RBP10.78□□□□□ -0.68
HDAC4-204ENST00000446876 SLC35B3Q9H1N7 401 aa10.78□□□□□ -0.68
HDAC4-204ENST00000446876 DYNC2H1Q8NCM8 4307 aaKnown RBP10.77□□□□□ -0.68
HDAC4-204ENST00000446876 SLC17A3O00476 420 aa10.77□□□□□ -0.69
HDAC4-204ENST00000446876 TMEM41BQ5BJD5 291 aa10.77□□□□□ -0.69
HDAC4-204ENST00000446876 BPIFA4PQ86YQ2 179 aa10.77□□□□□ -0.69
HDAC4-204ENST00000446876 ZNF709Q8N972 641 aa10.77□□□□□ -0.69
HDAC4-204ENST00000446876 ZNF738Q8NE65 137 aa10.77□□□□□ -0.69
HDAC4-204ENST00000446876 PFDN5Q99471 154 aa10.77□□□□□ -0.69
HDAC4-204ENST00000446876 X6R8D5 127 aa10.77□□□□□ -0.69
HDAC4-204ENST00000446876 H3BQ15 152 aa10.76□□□□□ -0.69
HDAC4-204ENST00000446876 IGLC2P0DOY2 106 aa10.76□□□□□ -0.69
HDAC4-204ENST00000446876 NUTF2P61970 127 aaKnown RBP10.76□□□□□ -0.69
HDAC4-204ENST00000446876 OXA1LQ15070 435 aa10.76□□□□□ -0.69
HDAC4-204ENST00000446876 Q5BKY6 102 aa10.76□□□□□ -0.69
HDAC4-204ENST00000446876 SPATA31B1PQ5VZV4 182 aa10.76□□□□□ -0.69
HDAC4-204ENST00000446876 Q8NAQ8 132 aa10.76□□□□□ -0.69
HDAC4-204ENST00000446876 LRRC20Q8TCA0 184 aa10.76□□□□□ -0.69
HDAC4-204ENST00000446876 WFDC1Q9HC57 220 aa10.76□□□□□ -0.69
HDAC4-204ENST00000446876 RNF24Q9Y225 148 aa10.76□□□□□ -0.69
HDAC4-204ENST00000446876 IGHV4-28A0A0C4DH34 117 aa10.75□□□□□ -0.69
HDAC4-204ENST00000446876 CXorf65A6NEN9 183 aa10.75□□□□□ -0.69
HDAC4-204ENST00000446876 ZNF705EA8MWA4 302 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-204ENST00000446876 CNN1P51911 297 aaKnown RBP10.75□□□□□ -0.69
HDAC4-204ENST00000446876 PSG9Q00887 426 aa10.75□□□□□ -0.69
HDAC4-204ENST00000446876 PSG3Q16557 428 aa10.75□□□□□ -0.69
HDAC4-204ENST00000446876 LCN15Q6UWW0 184 aa10.75□□□□□ -0.69
HDAC4-204ENST00000446876 C1QTNF4Q9BXJ3 329 aa10.75□□□□□ -0.69
HDAC4-204ENST00000446876 MFFQ9GZY8 342 aa10.75□□□□□ -0.69
HDAC4-204ENST00000446876 C11orf68Q9H3H3 251 aaKnown RBP10.75□□□□□ -0.69
HDAC4-204ENST00000446876 ZNF331Q9NQX6 463 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-204ENST00000446876 RFNGQ9Y644 331 aa10.75□□□□□ -0.69
HDAC4-204ENST00000446876 RYR3Q15413 4870 aa10.74□□□□□ -0.69
HDAC4-204ENST00000446876 ZNF705FA8MVS1 300 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-204ENST00000446876 RBMY1A1P0DJD3 496 aaKnown RBP10.74□□□□□ -0.69
HDAC4-204ENST00000446876 RBMY1CP0DJD4 496 aa10.74□□□□□ -0.69
HDAC4-204ENST00000446876 CXCL2P19875 107 aa10.74□□□□□ -0.69
HDAC4-204ENST00000446876 RBMY1FQ15415 496 aaKnown RBP10.74□□□□□ -0.69
HDAC4-204ENST00000446876 AMTNQ6UX39 209 aa10.74□□□□□ -0.69
HDAC4-204ENST00000446876 MIR17HGQ75NE6 70 aa10.74□□□□□ -0.69
HDAC4-204ENST00000446876 CLUHP3Q96NS8 147 aa10.74□□□□□ -0.69
HDAC4-204ENST00000446876 ZNF586Q9NXT0 402 aa10.74□□□□□ -0.69
HDAC4-204ENST00000446876 IGHV3OR16-12A0A075B7B8 117 aa10.73□□□□□ -0.69
HDAC4-204ENST00000446876 A8MTW9 85 aa10.73□□□□□ -0.69
HDAC4-204ENST00000446876 GIPP09681 153 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-204ENST00000446876 PYYP10082 97 aa10.73□□□□□ -0.69
HDAC4-204ENST00000446876 NANOS2P60321 138 aaKnown RBP10.73□□□□□ -0.69
HDAC4-204ENST00000446876 HIST1H1AQ02539 215 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-204ENST00000446876 OR8A1Q8NGG7 326 aa10.73□□□□□ -0.69
HDAC4-204ENST00000446876 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
HDAC4-204ENST00000446876 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
HDAC4-204ENST00000446876 SLC25A2Q9BXI2 301 aa10.73□□□□□ -0.69
HDAC4-204ENST00000446876 HRH4Q9H3N8 390 aa10.73□□□□□ -0.69
HDAC4-204ENST00000446876 PRAC2D3DTV9 90 aa10.72□□□□□ -0.69
HDAC4-204ENST00000446876 C17orf112F2Z3M2 114 aa10.72□□□□□ -0.69
HDAC4-204ENST00000446876 M0R2Z0 102 aa10.72□□□□□ -0.69
HDAC4-204ENST00000446876 DUSP14O95147 198 aaKnown RBP10.72□□□□□ -0.69
HDAC4-204ENST00000446876 IFNA5P01569 189 aa10.72□□□□□ -0.69
HDAC4-204ENST00000446876 MIFP14174 115 aa10.72□□□□□ -0.69
HDAC4-204ENST00000446876 SPINK13Q1W4C9 94 aa10.72□□□□□ -0.69
HDAC4-204ENST00000446876 FFAR4Q5NUL3 377 aa10.72□□□□□ -0.69
HDAC4-204ENST00000446876 SCGB1C1Q8TD33 95 aa10.72□□□□□ -0.69
HDAC4-204ENST00000446876 SAT2Q96F10 170 aaPredicted RBP10.72□□□□□ -0.69
HDAC4-204ENST00000446876 FAM167A-AS1Q96KT0 104 aa10.72□□□□□ -0.69
HDAC4-204ENST00000446876 KCNIP2Q9NS61 270 aa10.72□□□□□ -0.69
HDAC4-204ENST00000446876 SACSQ9NZJ4 4579 aa10.71□□□□□ -0.69
HDAC4-204ENST00000446876 EIF3GO75821 320 aaKnown RBP eCLIP10.71□□□□□ -0.69
HDAC4-204ENST00000446876 ZNF705AQ6ZN79 300 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-204ENST00000446876 C11orf45Q8TAV5 145 aa10.71□□□□□ -0.69
HDAC4-204ENST00000446876 BLNKQ8WV28 456 aa10.71□□□□□ -0.69
HDAC4-204ENST00000446876 LYSTQ99698 3801 aa10.71□□□□□ -0.69
HDAC4-204ENST00000446876 TMEM14CQ9P0S9 112 aa10.71□□□□□ -0.69
HDAC4-204ENST00000446876 PLECQ15149 4684 aaKnown RBP10.71□□□□□ -0.7
HDAC4-204ENST00000446876 TENM2Q9NT68 2774 aa10.71□□□□□ -0.7
HDAC4-204ENST00000446876 RYR2Q92736 4967 aa10.7□□□□□ -0.7
HDAC4-204ENST00000446876 TRBV19A0A075B6N1 114 aa10.7□□□□□ -0.7
HDAC4-204ENST00000446876 RHOBP62745 196 aa10.7□□□□□ -0.7
HDAC4-204ENST00000446876 BAP18Q8IXM2 172 aa10.7□□□□□ -0.7
HDAC4-204ENST00000446876 C1orf158Q8N1D5 194 aa10.7□□□□□ -0.7
HDAC4-204ENST00000446876 AQP10Q96PS8 301 aa10.7□□□□□ -0.7
HDAC4-204ENST00000446876 TRAV12-2A0A075B6T6 113 aa10.69□□□□□ -0.7
HDAC4-204ENST00000446876 FXYD6-FXYD2A0A087WZ82 144 aa10.69□□□□□ -0.7
HDAC4-204ENST00000446876 BOLA2-SMG1P6H3BVE0 249 aa10.69□□□□□ -0.7
HDAC4-204ENST00000446876 CRXO43186 299 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-204ENST00000446876 NDUFB4O95168 129 aa10.69□□□□□ -0.7
HDAC4-204ENST00000446876 HIST1H1EP10412 219 aaKnown RBP10.69□□□□□ -0.7
HDAC4-204ENST00000446876 GUK1Q16774 197 aa10.69□□□□□ -0.7
HDAC4-204ENST00000446876 OR2T35Q8NGX2 323 aa10.69□□□□□ -0.7
HDAC4-204ENST00000446876 MRPL32Q9BYC8 188 aaKnown RBP10.69□□□□□ -0.7
HDAC4-204ENST00000446876 PARD6GQ9BYG4 376 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-204ENST00000446876 CELA1Q9UNI1 258 aa10.69□□□□□ -0.7
HDAC4-204ENST00000446876 FUT9Q9Y231 359 aa10.69□□□□□ -0.7
HDAC4-204ENST00000446876 G3V3Q6 166 aa10.68□□□□□ -0.7
HDAC4-204ENST00000446876 M0R3E3 92 aa10.68□□□□□ -0.7
HDAC4-204ENST00000446876 OR10J4P0C629 311 aa10.68□□□□□ -0.7
HDAC4-204ENST00000446876 CEMP1Q6PRD7 247 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-204ENST00000446876 EXOC3-AS1Q8N2X6 119 aa10.68□□□□□ -0.7
HDAC4-204ENST00000446876 PHLDA1Q8WV24 401 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-204ENST00000446876 ASB13Q8WXK3 278 aa10.68□□□□□ -0.7
HDAC4-204ENST00000446876 IGF2BP2-AS1Q96M15 143 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 238.8 ms