RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 PTTG1O95997 202 aa13.57□□□□□ -0.24
HDAC4-203ENST00000445704 ZNF705DP0CH99 300 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-203ENST00000445704 ZNF705BP0CI00 300 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-203ENST00000445704 PRB4P10163 310 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-203ENST00000445704 CXCL3P19876 107 aa13.57□□□□□ -0.24
HDAC4-203ENST00000445704 B2MP61769 119 aa13.57□□□□□ -0.24
HDAC4-203ENST00000445704 PSG9Q00887 426 aa13.57□□□□□ -0.24
HDAC4-203ENST00000445704 AMTNQ6UX39 209 aa13.57□□□□□ -0.24
HDAC4-203ENST00000445704 Q6ZRG5 221 aa13.57□□□□□ -0.24
HDAC4-203ENST00000445704 THAP6Q8TBB0 222 aa13.57□□□□□ -0.24
HDAC4-203ENST00000445704 LYSTQ99698 3801 aa13.57□□□□□ -0.24
HDAC4-203ENST00000445704 DNAJC4Q9NNZ3 241 aa13.57□□□□□ -0.24
HDAC4-203ENST00000445704 PXMP4Q9Y6I8 212 aa13.57□□□□□ -0.24
HDAC4-203ENST00000445704 PLECQ15149 4684 aaKnown RBP13.57□□□□□ -0.24
HDAC4-203ENST00000445704 ALMS1Q8TCU4 4167 aa13.56□□□□□ -0.24
HDAC4-203ENST00000445704 TRAV5A0A0B4J249 113 aa13.56□□□□□ -0.24
HDAC4-203ENST00000445704 H3BTX0 84 aa13.56□□□□□ -0.24
HDAC4-203ENST00000445704 MPC2O95563 127 aa13.56□□□□□ -0.24
HDAC4-203ENST00000445704 CNN1P51911 297 aaKnown RBP13.56□□□□□ -0.24
HDAC4-203ENST00000445704 CLINT1Q14677 625 aa13.56□□□□□ -0.24
HDAC4-203ENST00000445704 ZNF705AQ6ZN79 300 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-203ENST00000445704 ZNF738Q8NE65 137 aa13.56□□□□□ -0.24
HDAC4-203ENST00000445704 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
HDAC4-203ENST00000445704 PHLDA1Q8WV24 401 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-203ENST00000445704 NPCDR1Q9BY65 106 aa13.56□□□□□ -0.24
HDAC4-203ENST00000445704 RNF24Q9Y225 148 aa13.56□□□□□ -0.24
HDAC4-203ENST00000445704 SLC17A3O00476 420 aa13.55□□□□□ -0.24
HDAC4-203ENST00000445704 BPIFA4PQ86YQ2 179 aa13.55□□□□□ -0.24
HDAC4-203ENST00000445704 PFDN5Q99471 154 aa13.55□□□□□ -0.24
HDAC4-203ENST00000445704 MFFQ9GZY8 342 aa13.55□□□□□ -0.24
HDAC4-203ENST00000445704 DNAH1Q9P2D7 4330 aa13.55□□□□□ -0.24
HDAC4-203ENST00000445704 ZNF705FA8MVS1 300 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-203ENST00000445704 H3BQ15 152 aa13.54□□□□□ -0.24
HDAC4-203ENST00000445704 MPDU1O75352 247 aa13.54□□□□□ -0.24
HDAC4-203ENST00000445704 IGLC2P0DOY2 106 aa13.54□□□□□ -0.24
HDAC4-203ENST00000445704 CXCL2P19875 107 aa13.54□□□□□ -0.24
HDAC4-203ENST00000445704 PSG3Q16557 428 aa13.54□□□□□ -0.24
HDAC4-203ENST00000445704 GCSAMLQ5JQS6 135 aa13.54□□□□□ -0.24
HDAC4-203ENST00000445704 LCN15Q6UWW0 184 aa13.54□□□□□ -0.24
HDAC4-203ENST00000445704 LRRC20Q8TCA0 184 aa13.54□□□□□ -0.24
HDAC4-203ENST00000445704 ZNF331Q9NQX6 463 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-203ENST00000445704 MBD2Q9UBB5 411 aa13.54□□□□□ -0.24
HDAC4-203ENST00000445704 IGHV3OR16-12A0A075B7B8 117 aa13.53□□□□□ -0.24
HDAC4-203ENST00000445704 JTBO76095 146 aa13.53□□□□□ -0.24
HDAC4-203ENST00000445704 C1orf158Q8N1D5 194 aa13.53□□□□□ -0.24
HDAC4-203ENST00000445704 OR11H7Q8NGC8 314 aa13.53□□□□□ -0.24
HDAC4-203ENST00000445704 CELA1Q9UNI1 258 aa13.53□□□□□ -0.24
HDAC4-203ENST00000445704 DUSP14O95147 198 aaKnown RBP13.52□□□□□ -0.25
HDAC4-203ENST00000445704 PET100P0DJ07 73 aa13.52□□□□□ -0.25
HDAC4-203ENST00000445704 OR8A1Q8NGG7 326 aa13.52□□□□□ -0.25
HDAC4-203ENST00000445704 NEU1Q99519 415 aa13.52□□□□□ -0.25
HDAC4-203ENST00000445704 SLC50A1Q9BRV3 221 aa13.52□□□□□ -0.25
HDAC4-203ENST00000445704 WDR61Q9GZS3 305 aaKnown RBP13.52□□□□□ -0.25
HDAC4-203ENST00000445704 HRH4Q9H3N8 390 aa13.52□□□□□ -0.25
HDAC4-203ENST00000445704 HSPB11Q9Y547 144 aa13.52□□□□□ -0.25
HDAC4-203ENST00000445704 HYDINQ4G0P3 5121 aa13.52□□□□□ -0.25
HDAC4-203ENST00000445704 M0R2Z0 102 aa13.51□□□□□ -0.25
HDAC4-203ENST00000445704 HIST1H1AQ02539 215 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-203ENST00000445704 SPINK13Q1W4C9 94 aa13.51□□□□□ -0.25
HDAC4-203ENST00000445704 RPUSD4Q96CM3 377 aaKnown RBP13.51□□□□□ -0.25
HDAC4-203ENST00000445704 SAT2Q96F10 170 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-203ENST00000445704 ATP5SQ99766 215 aa13.51□□□□□ -0.25
HDAC4-203ENST00000445704 ZNF586Q9NXT0 402 aa13.51□□□□□ -0.25
HDAC4-203ENST00000445704 CRXO43186 299 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-203ENST00000445704 RPL12P30050 165 aaKnown RBP13.5□□□□□ -0.25
HDAC4-203ENST00000445704 FCN2Q15485 313 aa13.5□□□□□ -0.25
HDAC4-203ENST00000445704 SMIM3Q9BZL3 60 aa13.5□□□□□ -0.25
HDAC4-203ENST00000445704 KLK5Q9Y337 293 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-203ENST00000445704 PRAC2D3DTV9 90 aa13.49□□□□□ -0.25
HDAC4-203ENST00000445704 LINC00476Q8WZB0 136 aa13.49□□□□□ -0.25
HDAC4-203ENST00000445704 IGF2BP2-AS1Q96M15 143 aa13.49□□□□□ -0.25
HDAC4-203ENST00000445704 GOLT1BQ9Y3E0 138 aa13.49□□□□□ -0.25
HDAC4-203ENST00000445704 SMIM9A6NGZ8 99 aa13.48□□□□□ -0.25
HDAC4-203ENST00000445704 BOLA2-SMG1P6H3BVE0 249 aa13.48□□□□□ -0.25
HDAC4-203ENST00000445704 PYYP10082 97 aa13.48□□□□□ -0.25
HDAC4-203ENST00000445704 Q6ZTC4 211 aa13.48□□□□□ -0.25
HDAC4-203ENST00000445704 ZNF767PQ75MW2 155 aa13.48□□□□□ -0.25
HDAC4-203ENST00000445704 BAP18Q8IXM2 172 aa13.48□□□□□ -0.25
HDAC4-203ENST00000445704 SLC25A2Q9BXI2 301 aa13.48□□□□□ -0.25
HDAC4-203ENST00000445704 TMEM14CQ9P0S9 112 aa13.48□□□□□ -0.25
HDAC4-203ENST00000445704 AMBPP02760 352 aa13.47□□□□□ -0.25
HDAC4-203ENST00000445704 RHOBP62745 196 aa13.47□□□□□ -0.25
HDAC4-203ENST00000445704 GUK1Q16774 197 aa13.47□□□□□ -0.25
HDAC4-203ENST00000445704 C12orf74Q32Q52 190 aa13.47□□□□□ -0.25
HDAC4-203ENST00000445704 MIR17HGQ75NE6 70 aa13.47□□□□□ -0.25
HDAC4-203ENST00000445704 FAM167A-AS1Q96KT0 104 aa13.47□□□□□ -0.25
HDAC4-203ENST00000445704 MED28Q9H204 178 aa13.47□□□□□ -0.25
HDAC4-203ENST00000445704 WFDC1Q9HC57 220 aa13.47□□□□□ -0.25
HDAC4-203ENST00000445704 RFNGQ9Y644 331 aa13.47□□□□□ -0.25
HDAC4-203ENST00000445704 TRBV19A0A075B6N1 114 aa13.46□□□□□ -0.25
HDAC4-203ENST00000445704 TRAV12-2A0A075B6T6 113 aa13.46□□□□□ -0.25
HDAC4-203ENST00000445704 EMP1P54849 157 aa13.46□□□□□ -0.25
HDAC4-203ENST00000445704 KCNIP2Q9NS61 270 aa13.46□□□□□ -0.25
HDAC4-203ENST00000445704 C17orf112F2Z3M2 114 aa13.45□□□□□ -0.26
HDAC4-203ENST00000445704 ZNF253O75346 499 aa13.45□□□□□ -0.26
HDAC4-203ENST00000445704 NDUFB4O95168 129 aa13.45□□□□□ -0.26
HDAC4-203ENST00000445704 INSP01308 110 aa13.45□□□□□ -0.26
HDAC4-203ENST00000445704 HBE1P02100 147 aa13.45□□□□□ -0.26
HDAC4-203ENST00000445704 PRM2P04554 102 aa13.45□□□□□ -0.26
HDAC4-203ENST00000445704 HIST1H1EP10412 219 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms