RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 INSP01308 110 aa14.27□□□□□ -0.13
SHROOM1-204ENST00000440118 AMBPP02760 352 aa14.27□□□□□ -0.13
SHROOM1-204ENST00000440118 HIST1H1AQ02539 215 aaPredicted RBP14.27□□□□□ -0.13
SHROOM1-204ENST00000440118 LINC00305Q7Z4B0 112 aa14.27□□□□□ -0.13
SHROOM1-204ENST00000440118 TRAV8-2A0A0B4J237 113 aa14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 CAMLGP49069 296 aa14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 RHOBP62745 196 aa14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 SPINK13Q1W4C9 94 aa14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 RRN3P1Q2M238 152 aa14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 Q6ZRG5 221 aa14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 C17orf77Q96MU5 243 aa14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 MGST2Q99735 147 aa14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 RNF126Q9BV68 326 aa14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 GPN1Q9HCN4 374 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 UQCC1Q9NVA1 299 aa14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 APLNQ9ULZ1 77 aa14.26□□□□□ -0.13
SHROOM1-204ENST00000440118 A0A087X0K7 114 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 UBE2L5PA0A1B0GUS4 154 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 LOC102723971A0A1B0GUV8 181 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 FAM24AA6NFZ4 105 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 M0R2Z0 102 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 HBG1P69891 147 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 HBG2P69892 147 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 BAXQ07812 192 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 C10orf113Q5VZT2 155 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 LCN15Q6UWW0 184 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 OR11H7Q8NGC8 314 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 IGF2BP2-AS1Q96M15 143 aa14.25□□□□□ -0.13
SHROOM1-204ENST00000440118 FAM222AQ5U5X8 452 aa14.24□□□□□ -0.13
SHROOM1-204ENST00000440118 PATE2Q6UY27 113 aa14.24□□□□□ -0.13
SHROOM1-204ENST00000440118 BPIFA4PQ86YQ2 179 aa14.24□□□□□ -0.13
SHROOM1-204ENST00000440118 NDUFAF3Q9BU61 184 aa14.24□□□□□ -0.13
SHROOM1-204ENST00000440118 BOLA2-SMG1P6H3BVE0 249 aa14.23□□□□□ -0.13
SHROOM1-204ENST00000440118 CXCL3P19876 107 aa14.23□□□□□ -0.13
SHROOM1-204ENST00000440118 SULT1A1P50225 295 aa14.23□□□□□ -0.13
SHROOM1-204ENST00000440118 RAB32Q13637 225 aa14.23□□□□□ -0.13
SHROOM1-204ENST00000440118 AMTNQ6UX39 209 aa14.23□□□□□ -0.13
SHROOM1-204ENST00000440118 C1orf158Q8N1D5 194 aa14.23□□□□□ -0.13
SHROOM1-204ENST00000440118 SLC50A1Q9BRV3 221 aa14.23□□□□□ -0.13
SHROOM1-204ENST00000440118 NIPSNAP3BQ9BS92 247 aa14.23□□□□□ -0.13
SHROOM1-204ENST00000440118 LYRM2Q9NU23 88 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-204ENST00000440118 YTHDF2Q9Y5A9 579 aaKnown RBP14.23□□□□□ -0.13
SHROOM1-204ENST00000440118 A8MTW9 85 aa14.22□□□□□ -0.13
SHROOM1-204ENST00000440118 SNRPCP09234 159 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-204ENST00000440118 HTN3P15516 51 aa14.22□□□□□ -0.13
SHROOM1-204ENST00000440118 CXCL2P19875 107 aa14.22□□□□□ -0.13
SHROOM1-204ENST00000440118 PSG3Q16557 428 aa14.22□□□□□ -0.13
SHROOM1-204ENST00000440118 BAP18Q8IXM2 172 aa14.22□□□□□ -0.13
SHROOM1-204ENST00000440118 OR8A1Q8NGG7 326 aa14.22□□□□□ -0.13
SHROOM1-204ENST00000440118 OR1L4Q8NGR5 311 aa14.22□□□□□ -0.13
SHROOM1-204ENST00000440118 RPUSD4Q96CM3 377 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-204ENST00000440118 DKK2Q9UBU2 259 aa14.22□□□□□ -0.13
SHROOM1-204ENST00000440118 KMT2AQ03164 3969 aa14.22□□□□□ -0.13
SHROOM1-204ENST00000440118 S100A11P31949 105 aa14.21□□□□□ -0.13
SHROOM1-204ENST00000440118 MIC13Q5XKP0 118 aa14.21□□□□□ -0.13
SHROOM1-204ENST00000440118 PFDN5Q99471 154 aa14.21□□□□□ -0.13
SHROOM1-204ENST00000440118 MED28Q9H204 178 aa14.21□□□□□ -0.13
SHROOM1-204ENST00000440118 TRAV12-2A0A075B6T6 113 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 IGSF23A1L1A6 192 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 FGF7P21781 194 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 PRR20EP86478 221 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 PRR20CP86479 221 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 PRR20DP86480 221 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 PRR20BP86481 221 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 PRR20AP86496 221 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 OPCMLQ14982 345 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 TMEM252Q8N6L7 170 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 TMEM37Q8WXS4 190 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 DNAJC4Q9NNZ3 241 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 WDR83OSQ9Y284 106 aa14.2□□□□□ -0.14
SHROOM1-204ENST00000440118 H3BTX0 84 aa14.19□□□□□ -0.14
SHROOM1-204ENST00000440118 PRB4P10163 310 aaPredicted RBP14.19□□□□□ -0.14
SHROOM1-204ENST00000440118 B2MP61769 119 aa14.19□□□□□ -0.14
SHROOM1-204ENST00000440118 DAD1P61803 113 aa14.19□□□□□ -0.14
SHROOM1-204ENST00000440118 C11orf1Q9H5F2 150 aa14.19□□□□□ -0.14
SHROOM1-204ENST00000440118 ZNF705GA8MUZ8 300 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 MRPS12O15235 138 aaKnown RBP14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 RLN2P04090 185 aa14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 P0DMU3 169 aa14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 FAM231AP0DMU4 169 aa14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 FAM231CP0DMU5 169 aa14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 LRRC37A5PQ49AS3 106 aa14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 OR10J6PQ8NGY7 276 aa14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 LINC01587Q99440 93 aa14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 ZNF331Q9NQX6 463 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 SLC39A9Q9NUM3 307 aa14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 ALG5Q9Y673 324 aa14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 PXMP4Q9Y6I8 212 aa14.18□□□□□ -0.14
SHROOM1-204ENST00000440118 HTN1P15515 57 aa14.17□□□□□ -0.14
SHROOM1-204ENST00000440118 ATP6V1FQ16864 119 aa14.17□□□□□ -0.14
SHROOM1-204ENST00000440118 VWC2Q2TAL6 325 aa14.17□□□□□ -0.14
SHROOM1-204ENST00000440118 MORN5Q5VZ52 161 aa14.17□□□□□ -0.14
SHROOM1-204ENST00000440118 UBE2DNLQ8IWF7 75 aa14.17□□□□□ -0.14
SHROOM1-204ENST00000440118 ASB13Q8WXK3 278 aa14.17□□□□□ -0.14
SHROOM1-204ENST00000440118 SLC17A3O00476 420 aa14.16□□□□□ -0.14
SHROOM1-204ENST00000440118 CRXO43186 299 aaPredicted RBP14.16□□□□□ -0.14
SHROOM1-204ENST00000440118 SIX6O95475 246 aa14.16□□□□□ -0.14
SHROOM1-204ENST00000440118 ZFP69Q49AA0 526 aa14.16□□□□□ -0.14
SHROOM1-204ENST00000440118 TCTE3Q8IZS6 198 aa14.16□□□□□ -0.14
SHROOM1-204ENST00000440118 TMEM256Q8N2U0 113 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms