RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 CSMD3Q7Z407 3707 aa17.4■□□□□ 0.38
CPNE1-217ENST00000439669 MRPS12O15235 138 aaKnown RBP17.39■□□□□ 0.37
CPNE1-217ENST00000439669 MORN5Q5VZ52 161 aa17.39■□□□□ 0.37
CPNE1-217ENST00000439669 PXMP4Q9Y6I8 212 aa17.39■□□□□ 0.37
CPNE1-217ENST00000439669 RYR3Q15413 4870 aa17.38■□□□□ 0.37
CPNE1-217ENST00000439669 IGHV3OR16-12A0A075B7B8 117 aa17.38■□□□□ 0.37
CPNE1-217ENST00000439669 DUSP14O95147 198 aaKnown RBP17.38■□□□□ 0.37
CPNE1-217ENST00000439669 SNRPCP09234 159 aaKnown RBP17.38■□□□□ 0.37
CPNE1-217ENST00000439669 PET100P0DJ07 73 aa17.38■□□□□ 0.37
CPNE1-217ENST00000439669 CXCL3P19876 107 aa17.38■□□□□ 0.37
CPNE1-217ENST00000439669 HLA-DMBP28068 263 aa17.38■□□□□ 0.37
CPNE1-217ENST00000439669 CLINT1Q14677 625 aa17.38■□□□□ 0.37
CPNE1-217ENST00000439669 THAP6Q8TBB0 222 aa17.38■□□□□ 0.37
CPNE1-217ENST00000439669 PFDN5Q99471 154 aa17.38■□□□□ 0.37
CPNE1-217ENST00000439669 DYNC2H1Q8NCM8 4307 aaKnown RBP17.37■□□□□ 0.37
CPNE1-217ENST00000439669 MPDU1O75352 247 aa17.37■□□□□ 0.37
CPNE1-217ENST00000439669 PTTG1O95997 202 aa17.37■□□□□ 0.37
CPNE1-217ENST00000439669 ZNF705DP0CH99 300 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-217ENST00000439669 ZNF705BP0CI00 300 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-217ENST00000439669 CXCL2P19875 107 aa17.37■□□□□ 0.37
CPNE1-217ENST00000439669 CNN1P51911 297 aaKnown RBP17.37■□□□□ 0.37
CPNE1-217ENST00000439669 LCN15Q6UWW0 184 aa17.37■□□□□ 0.37
CPNE1-217ENST00000439669 MPC2O95563 127 aa17.36■□□□□ 0.37
CPNE1-217ENST00000439669 ZNF705AQ6ZN79 300 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-217ENST00000439669 CHAC2Q8WUX2 184 aa17.36■□□□□ 0.37
CPNE1-217ENST00000439669 NPCDR1Q9BY65 106 aa17.36■□□□□ 0.37
CPNE1-217ENST00000439669 ALG5Q9Y673 324 aa17.36■□□□□ 0.37
CPNE1-217ENST00000439669 TRAV5A0A0B4J249 113 aa17.35■□□□□ 0.37
CPNE1-217ENST00000439669 H3BTX0 84 aa17.35■□□□□ 0.37
CPNE1-217ENST00000439669 PSG3Q16557 428 aa17.35■□□□□ 0.37
CPNE1-217ENST00000439669 SLC50A1Q9BRV3 221 aa17.35■□□□□ 0.37
CPNE1-217ENST00000439669 GOLT1BQ9Y3E0 138 aa17.35■□□□□ 0.37
CPNE1-217ENST00000439669 A8MTW9 85 aa17.34■□□□□ 0.37
CPNE1-217ENST00000439669 HIST1H1AQ02539 215 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-217ENST00000439669 AMTNQ6UX39 209 aa17.34■□□□□ 0.37
CPNE1-217ENST00000439669 RNF126Q9BV68 326 aa17.34■□□□□ 0.37
CPNE1-217ENST00000439669 HRH4Q9H3N8 390 aa17.34■□□□□ 0.37
CPNE1-217ENST00000439669 ZNF331Q9NQX6 463 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-217ENST00000439669 ZNF705FA8MVS1 300 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-217ENST00000439669 PRB4P10163 310 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-217ENST00000439669 OR11H7Q8NGC8 314 aa17.33■□□□□ 0.36
CPNE1-217ENST00000439669 NEU1Q99519 415 aa17.33■□□□□ 0.36
CPNE1-217ENST00000439669 SLC17A3O00476 420 aa17.32■□□□□ 0.36
CPNE1-217ENST00000439669 IGLC2P0DOY2 106 aa17.32■□□□□ 0.36
CPNE1-217ENST00000439669 SPINK13Q1W4C9 94 aa17.32■□□□□ 0.36
CPNE1-217ENST00000439669 OR8A1Q8NGG7 326 aa17.32■□□□□ 0.36
CPNE1-217ENST00000439669 RPUSD4Q96CM3 377 aaKnown RBP17.32■□□□□ 0.36
CPNE1-217ENST00000439669 MBD2Q9UBB5 411 aa17.32■□□□□ 0.36
CPNE1-217ENST00000439669 H3BQ15 152 aa17.31■□□□□ 0.36
CPNE1-217ENST00000439669 AMBPP02760 352 aa17.31■□□□□ 0.36
CPNE1-217ENST00000439669 RHOBP62745 196 aa17.31■□□□□ 0.36
CPNE1-217ENST00000439669 WDR61Q9GZS3 305 aaKnown RBP17.31■□□□□ 0.36
CPNE1-217ENST00000439669 KCNIP2Q9NS61 270 aa17.31■□□□□ 0.36
CPNE1-217ENST00000439669 PPP1R14DQ9NXH3 145 aa17.31■□□□□ 0.36
CPNE1-217ENST00000439669 CELA1Q9UNI1 258 aa17.31■□□□□ 0.36
CPNE1-217ENST00000439669 HSPB11Q9Y547 144 aa17.31■□□□□ 0.36
CPNE1-217ENST00000439669 SMIM9A6NGZ8 99 aa17.3■□□□□ 0.36
CPNE1-217ENST00000439669 M0R2Z0 102 aa17.3■□□□□ 0.36
CPNE1-217ENST00000439669 GCSAMLQ5JQS6 135 aa17.3■□□□□ 0.36
CPNE1-217ENST00000439669 C1orf158Q8N1D5 194 aa17.3■□□□□ 0.36
CPNE1-217ENST00000439669 IGF2BP2-AS1Q96M15 143 aa17.3■□□□□ 0.36
CPNE1-217ENST00000439669 ATP5SQ99766 215 aa17.3■□□□□ 0.36
CPNE1-217ENST00000439669 TMEM208Q9BTX3 173 aa17.3■□□□□ 0.36
CPNE1-217ENST00000439669 RFNGQ9Y644 331 aa17.3■□□□□ 0.36
CPNE1-217ENST00000439669 BOLA2-SMG1P6H3BVE0 249 aa17.29■□□□□ 0.36
CPNE1-217ENST00000439669 RPL12P30050 165 aaKnown RBP17.29■□□□□ 0.36
CPNE1-217ENST00000439669 EMP1P54849 157 aa17.29■□□□□ 0.36
CPNE1-217ENST00000439669 GUK1Q16774 197 aa17.29■□□□□ 0.36
CPNE1-217ENST00000439669 LINC00476Q8WZB0 136 aa17.29■□□□□ 0.36
CPNE1-217ENST00000439669 SMIM3Q9BZL3 60 aa17.29■□□□□ 0.36
CPNE1-217ENST00000439669 SACSQ9NZJ4 4579 aa17.28■□□□□ 0.36
CPNE1-217ENST00000439669 TMEM189A5PLL7 270 aa17.28■□□□□ 0.36
CPNE1-217ENST00000439669 LY6G6CO95867 125 aa17.28■□□□□ 0.36
CPNE1-217ENST00000439669 INSP01308 110 aa17.28■□□□□ 0.36
CPNE1-217ENST00000439669 HBE1P02100 147 aa17.28■□□□□ 0.36
CPNE1-217ENST00000439669 Q6ZTC4 211 aa17.28■□□□□ 0.36
CPNE1-217ENST00000439669 MED28Q9H204 178 aa17.28■□□□□ 0.36
CPNE1-217ENST00000439669 ZNF586Q9NXT0 402 aa17.28■□□□□ 0.36
CPNE1-217ENST00000439669 RYR2Q92736 4967 aa17.28■□□□□ 0.36
CPNE1-217ENST00000439669 C11orf94C9JXX5 98 aa17.27■□□□□ 0.36
CPNE1-217ENST00000439669 C17orf112F2Z3M2 114 aa17.27■□□□□ 0.36
CPNE1-217ENST00000439669 BAP18Q8IXM2 172 aa17.27■□□□□ 0.36
CPNE1-217ENST00000439669 C2CD4CQ8TF44 421 aa17.27■□□□□ 0.36
CPNE1-217ENST00000439669 SAT2Q96F10 170 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-217ENST00000439669 FCN2Q15485 313 aa17.26■□□□□ 0.35
CPNE1-217ENST00000439669 ZNF767PQ75MW2 155 aa17.26■□□□□ 0.35
CPNE1-217ENST00000439669 TMEM14CQ9P0S9 112 aa17.26■□□□□ 0.35
CPNE1-217ENST00000439669 TRAV12-2A0A075B6T6 113 aa17.25■□□□□ 0.35
CPNE1-217ENST00000439669 TRAV10A0A0B4J240 114 aa17.25■□□□□ 0.35
CPNE1-217ENST00000439669 CRXO43186 299 aaPredicted RBP17.25■□□□□ 0.35
CPNE1-217ENST00000439669 IFNA5P01569 189 aa17.25■□□□□ 0.35
CPNE1-217ENST00000439669 PYYP10082 97 aa17.25■□□□□ 0.35
CPNE1-217ENST00000439669 RRN3P1Q2M238 152 aa17.25■□□□□ 0.35
CPNE1-217ENST00000439669 MIR17HGQ75NE6 70 aa17.25■□□□□ 0.35
CPNE1-217ENST00000439669 OR10J6PQ8NGY7 276 aa17.25■□□□□ 0.35
CPNE1-217ENST00000439669 SCGB1C1Q8TD33 95 aa17.25■□□□□ 0.35
CPNE1-217ENST00000439669 LOC102723971A0A1B0GUV8 181 aa17.24■□□□□ 0.35
CPNE1-217ENST00000439669 ZNF253O75346 499 aa17.24■□□□□ 0.35
CPNE1-217ENST00000439669 C12orf74Q32Q52 190 aa17.24■□□□□ 0.35
CPNE1-217ENST00000439669 SLC25A2Q9BXI2 301 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms