RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 Q6ZRG5 221 aa13.44□□□□□ -0.26
CCDC78-204ENST00000439619 LINC00305Q7Z4B0 112 aa13.44□□□□□ -0.26
CCDC78-204ENST00000439619 BPIFA4PQ86YQ2 179 aa13.44□□□□□ -0.26
CCDC78-204ENST00000439619 C12orf45Q8N5I9 185 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-204ENST00000439619 FAM240BA0A1B0GVZ2 78 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 BOLA2-SMG1P6H3BVE0 249 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 M0R2Z0 102 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 CXCL3P19876 107 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 DAD1P61803 113 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 PSG3Q16557 428 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 MZT2BQ6NZ67 158 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 POM121L12Q8N7R1 296 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 OR8A1Q8NGG7 326 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 C2orf50Q96LR7 162 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 SLC50A1Q9BRV3 221 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 BIRC6Q9NR09 4857 aa13.43□□□□□ -0.26
CCDC78-204ENST00000439619 H2AFB2P0C5Z0 115 aa13.42□□□□□ -0.26
CCDC78-204ENST00000439619 HTN3P15516 51 aa13.42□□□□□ -0.26
CCDC78-204ENST00000439619 CAMLGP49069 296 aa13.42□□□□□ -0.26
CCDC78-204ENST00000439619 PATE2Q6UY27 113 aa13.42□□□□□ -0.26
CCDC78-204ENST00000439619 LINC00299Q6ZSB3 139 aa13.42□□□□□ -0.26
CCDC78-204ENST00000439619 TMEM256Q8N2U0 113 aa13.42□□□□□ -0.26
CCDC78-204ENST00000439619 ARL16Q0P5N6 197 aa13.41□□□□□ -0.26
CCDC78-204ENST00000439619 C10orf113Q5VZT2 155 aa13.41□□□□□ -0.26
CCDC78-204ENST00000439619 STX12Q86Y82 276 aa13.41□□□□□ -0.26
CCDC78-204ENST00000439619 UBE2DNLQ8IWF7 75 aa13.41□□□□□ -0.26
CCDC78-204ENST00000439619 RPUSD4Q96CM3 377 aaKnown RBP13.41□□□□□ -0.26
CCDC78-204ENST00000439619 SEC22CQ9BRL7 303 aa13.41□□□□□ -0.26
CCDC78-204ENST00000439619 UQCC1Q9NVA1 299 aa13.41□□□□□ -0.26
CCDC78-204ENST00000439619 LYRM9A8MSI8 78 aa13.4□□□□□ -0.26
CCDC78-204ENST00000439619 CST7O76096 145 aa13.4□□□□□ -0.26
CCDC78-204ENST00000439619 TSPOP30536 169 aa13.4□□□□□ -0.26
CCDC78-204ENST00000439619 S100A10P60903 97 aa13.4□□□□□ -0.26
CCDC78-204ENST00000439619 HBG1P69891 147 aa13.4□□□□□ -0.26
CCDC78-204ENST00000439619 HBG2P69892 147 aa13.4□□□□□ -0.26
CCDC78-204ENST00000439619 OR1L4Q8NGR5 311 aa13.4□□□□□ -0.26
CCDC78-204ENST00000439619 S100ZQ8WXG8 99 aa13.4□□□□□ -0.26
CCDC78-204ENST00000439619 LINC01587Q99440 93 aa13.4□□□□□ -0.26
CCDC78-204ENST00000439619 PFDN5Q99471 154 aa13.4□□□□□ -0.26
CCDC78-204ENST00000439619 MGST2Q99735 147 aa13.4□□□□□ -0.26
CCDC78-204ENST00000439619 ZNF705GA8MUZ8 300 aaPredicted RBP13.39□□□□□ -0.27
CCDC78-204ENST00000439619 S100A11P31949 105 aa13.39□□□□□ -0.27
CCDC78-204ENST00000439619 LINC00336Q6ZUF6 198 aa13.39□□□□□ -0.27
CCDC78-204ENST00000439619 NRARPQ7Z6K4 114 aa13.39□□□□□ -0.27
CCDC78-204ENST00000439619 BAP18Q8IXM2 172 aa13.39□□□□□ -0.27
CCDC78-204ENST00000439619 DNAJC4Q9NNZ3 241 aa13.39□□□□□ -0.27
CCDC78-204ENST00000439619 ZNF331Q9NQX6 463 aaPredicted RBP13.39□□□□□ -0.27
CCDC78-204ENST00000439619 PXMP4Q9Y6I8 212 aa13.39□□□□□ -0.27
CCDC78-204ENST00000439619 TRAV12-2A0A075B6T6 113 aa13.38□□□□□ -0.27
CCDC78-204ENST00000439619 CRXO43186 299 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-204ENST00000439619 SULT1A1P50225 295 aa13.38□□□□□ -0.27
CCDC78-204ENST00000439619 GUK1Q16774 197 aa13.38□□□□□ -0.27
CCDC78-204ENST00000439619 OR10J6PQ8NGY7 276 aa13.38□□□□□ -0.27
CCDC78-204ENST00000439619 GPN1Q9HCN4 374 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-204ENST00000439619 PLA2G2EQ9NZK7 142 aa13.38□□□□□ -0.27
CCDC78-204ENST00000439619 FAM24AA6NFZ4 105 aa13.37□□□□□ -0.27
CCDC78-204ENST00000439619 MRPS12O15235 138 aaKnown RBP13.37□□□□□ -0.27
CCDC78-204ENST00000439619 CDKN1BP46527 198 aa13.37□□□□□ -0.27
CCDC78-204ENST00000439619 TAS2R60P59551 318 aa13.37□□□□□ -0.27
CCDC78-204ENST00000439619 BAXQ07812 192 aa13.37□□□□□ -0.27
CCDC78-204ENST00000439619 TMEM37Q8WXS4 190 aa13.37□□□□□ -0.27
CCDC78-204ENST00000439619 LYRM2Q9NU23 88 aaPredicted RBP13.37□□□□□ -0.27
CCDC78-204ENST00000439619 HTN1P15515 57 aa13.36□□□□□ -0.27
CCDC78-204ENST00000439619 OPCMLQ14982 345 aa13.36□□□□□ -0.27
CCDC78-204ENST00000439619 ATP6V1FQ16864 119 aa13.36□□□□□ -0.27
CCDC78-204ENST00000439619 C15orf53Q8NAA6 179 aa13.36□□□□□ -0.27
CCDC78-204ENST00000439619 WDR83OSQ9Y284 106 aa13.36□□□□□ -0.27
CCDC78-204ENST00000439619 UBE2L5PA0A1B0GUS4 154 aa13.35□□□□□ -0.27
CCDC78-204ENST00000439619 DEFB130BP0DP73 79 aa13.35□□□□□ -0.27
CCDC78-204ENST00000439619 DEFB130AP0DP74 79 aa13.35□□□□□ -0.27
CCDC78-204ENST00000439619 RNF212Q495C1 297 aa13.35□□□□□ -0.27
CCDC78-204ENST00000439619 MIC13Q5XKP0 118 aa13.35□□□□□ -0.27
CCDC78-204ENST00000439619 ZNF493Q6ZR52 646 aa13.35□□□□□ -0.27
CCDC78-204ENST00000439619 ENKURQ8TC29 256 aa13.35□□□□□ -0.27
CCDC78-204ENST00000439619 C16orf74Q96GX8 76 aa13.35□□□□□ -0.27
CCDC78-204ENST00000439619 C20orf144Q9BQM9 153 aa13.35□□□□□ -0.27
CCDC78-204ENST00000439619 H7BYZ3 331 aa13.34□□□□□ -0.27
CCDC78-204ENST00000439619 RLN2P04090 185 aa13.34□□□□□ -0.27
CCDC78-204ENST00000439619 SNRPCP09234 159 aaKnown RBP13.34□□□□□ -0.27
CCDC78-204ENST00000439619 RPL29P47914 159 aaKnown RBP13.34□□□□□ -0.27
CCDC78-204ENST00000439619 ASAH1Q13510 395 aa13.34□□□□□ -0.27
CCDC78-204ENST00000439619 RAB32Q13637 225 aa13.34□□□□□ -0.27
CCDC78-204ENST00000439619 VWC2Q2TAL6 325 aa13.34□□□□□ -0.27
CCDC78-204ENST00000439619 TMEM88Q6PEY1 159 aa13.34□□□□□ -0.27
CCDC78-204ENST00000439619 TMEM252Q8N6L7 170 aa13.34□□□□□ -0.27
CCDC78-204ENST00000439619 SLC39A9Q9NUM3 307 aa13.34□□□□□ -0.27
CCDC78-204ENST00000439619 MPDU1O75352 247 aa13.33□□□□□ -0.28
CCDC78-204ENST00000439619 IGLC2P0DOY2 106 aa13.33□□□□□ -0.28
CCDC78-204ENST00000439619 CCDC28AQ8IWP9 274 aa13.33□□□□□ -0.28
CCDC78-204ENST00000439619 C11orf1Q9H5F2 150 aa13.33□□□□□ -0.28
CCDC78-204ENST00000439619 TIMM8BQ9Y5J9 83 aaPredicted RBP13.33□□□□□ -0.28
CCDC78-204ENST00000439619 KMT2AQ03164 3969 aa13.32□□□□□ -0.28
CCDC78-204ENST00000439619 H3BTX0 84 aa13.32□□□□□ -0.28
CCDC78-204ENST00000439619 ATP5G1P05496 136 aa13.32□□□□□ -0.28
CCDC78-204ENST00000439619 FGF7P21781 194 aa13.32□□□□□ -0.28
CCDC78-204ENST00000439619 ATP5G3P48201 142 aa13.32□□□□□ -0.28
CCDC78-204ENST00000439619 LGALS9BQ3B8N2 356 aa13.32□□□□□ -0.28
CCDC78-204ENST00000439619 CHAC2Q8WUX2 184 aa13.32□□□□□ -0.28
CCDC78-204ENST00000439619 ATG101Q9BSB4 218 aa13.32□□□□□ -0.28
CCDC78-204ENST00000439619 IGSF23A1L1A6 192 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms