RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 MFFQ9GZY8 342 aa13.01□□□□□ -0.33
SSR4P1-202ENST00000429427 TRAV5A0A0B4J249 113 aa13□□□□□ -0.33
SSR4P1-202ENST00000429427 H3BTX0 84 aa13□□□□□ -0.33
SSR4P1-202ENST00000429427 SLC17A3O00476 420 aa13□□□□□ -0.33
SSR4P1-202ENST00000429427 DEFA1P59665 94 aa13□□□□□ -0.33
SSR4P1-202ENST00000429427 DEFA3P59666 94 aa13□□□□□ -0.33
SSR4P1-202ENST00000429427 C10orf113Q5VZT2 155 aa13□□□□□ -0.33
SSR4P1-202ENST00000429427 CHAC2Q8WUX2 184 aa13□□□□□ -0.33
SSR4P1-202ENST00000429427 NEU1Q99519 415 aa13□□□□□ -0.33
SSR4P1-202ENST00000429427 H3BQ15 152 aa12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 CRXO43186 299 aaPredicted RBP12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 IGLC2P0DOY2 106 aa12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 RPL29P47914 159 aaKnown RBP12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 HBG1P69891 147 aa12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 HBG2P69892 147 aa12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 BAXQ07812 192 aa12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 Q6ZTC4 211 aa12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 ZNF738Q8NE65 137 aa12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 OR11H7Q8NGC8 314 aa12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 RNF126Q9BV68 326 aa12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 DNAJC4Q9NNZ3 241 aa12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 SLC39A9Q9NUM3 307 aa12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 KLK5Q9Y337 293 aaPredicted RBP12.99□□□□□ -0.33
SSR4P1-202ENST00000429427 IGHV3OR16-12A0A075B7B8 117 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 E5RGE8 158 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 M0R2Z0 102 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 FGF7P21781 194 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 B2MP61769 119 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 RAB31Q13636 194 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 PSG3Q16557 428 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 C12orf74Q32Q52 190 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 GCSAMLQ5JQS6 135 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 ZNF767PQ75MW2 155 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 OR5C1Q8NGR4 320 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 THAP6Q8TBB0 222 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 PPP1R1CQ8WVI7 109 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 NPCDR1Q9BY65 106 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 ZNF331Q9NQX6 463 aaPredicted RBP12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 PXMP4Q9Y6I8 212 aa12.98□□□□□ -0.33
SSR4P1-202ENST00000429427 ATP6V1FQ16864 119 aa12.97□□□□□ -0.33
SSR4P1-202ENST00000429427 SPINK13Q1W4C9 94 aa12.97□□□□□ -0.33
SSR4P1-202ENST00000429427 SAT2Q96F10 170 aaPredicted RBP12.97□□□□□ -0.33
SSR4P1-202ENST00000429427 PRAC2D3DTV9 90 aa12.96□□□□□ -0.33
SSR4P1-202ENST00000429427 SSNA1O43805 119 aa12.96□□□□□ -0.33
SSR4P1-202ENST00000429427 CXCL2P19875 107 aa12.96□□□□□ -0.33
SSR4P1-202ENST00000429427 CLINT1Q14677 625 aa12.96□□□□□ -0.33
SSR4P1-202ENST00000429427 LCN15Q6UWW0 184 aa12.96□□□□□ -0.33
SSR4P1-202ENST00000429427 Q6ZRG5 221 aa12.96□□□□□ -0.33
SSR4P1-202ENST00000429427 S100A7AQ86SG5 101 aa12.96□□□□□ -0.33
SSR4P1-202ENST00000429427 BPIFA4PQ86YQ2 179 aa12.96□□□□□ -0.33
SSR4P1-202ENST00000429427 OR8A1Q8NGG7 326 aa12.96□□□□□ -0.33
SSR4P1-202ENST00000429427 LY6G6CO95867 125 aa12.95□□□□□ -0.34
SSR4P1-202ENST00000429427 PRM2P04554 102 aa12.95□□□□□ -0.34
SSR4P1-202ENST00000429427 CYCSP99999 105 aaKnown RBP12.95□□□□□ -0.34
SSR4P1-202ENST00000429427 HIST1H1AQ02539 215 aaPredicted RBP12.95□□□□□ -0.34
SSR4P1-202ENST00000429427 BAP18Q8IXM2 172 aa12.95□□□□□ -0.34
SSR4P1-202ENST00000429427 RPUSD4Q96CM3 377 aaKnown RBP12.95□□□□□ -0.34
SSR4P1-202ENST00000429427 IGF2BP2-AS1Q96M15 143 aa12.95□□□□□ -0.34
SSR4P1-202ENST00000429427 SMIM9A6NGZ8 99 aa12.94□□□□□ -0.34
SSR4P1-202ENST00000429427 DUSP14O95147 198 aaKnown RBP12.94□□□□□ -0.34
SSR4P1-202ENST00000429427 MPC2O95563 127 aa12.94□□□□□ -0.34
SSR4P1-202ENST00000429427 RLN2P04090 185 aa12.94□□□□□ -0.34
SSR4P1-202ENST00000429427 OR1L4Q8NGR5 311 aa12.94□□□□□ -0.34
SSR4P1-202ENST00000429427 PFDN5Q99471 154 aa12.94□□□□□ -0.34
SSR4P1-202ENST00000429427 SLC25A31Q9H0C2 315 aa12.94□□□□□ -0.34
SSR4P1-202ENST00000429427 ZNF586Q9NXT0 402 aa12.94□□□□□ -0.34
SSR4P1-202ENST00000429427 RNF24Q9Y225 148 aa12.94□□□□□ -0.34
SSR4P1-202ENST00000429427 ALG5Q9Y673 324 aa12.94□□□□□ -0.34
SSR4P1-202ENST00000429427 TRAV12-2A0A075B6T6 113 aa12.93□□□□□ -0.34
SSR4P1-202ENST00000429427 BOLA2-SMG1P6H3BVE0 249 aa12.93□□□□□ -0.34
SSR4P1-202ENST00000429427 MPDU1O75352 247 aa12.93□□□□□ -0.34
SSR4P1-202ENST00000429427 EMP1P54849 157 aa12.93□□□□□ -0.34
SSR4P1-202ENST00000429427 LRRC20Q8TCA0 184 aa12.93□□□□□ -0.34
SSR4P1-202ENST00000429427 C2CD4CQ8TF44 421 aa12.93□□□□□ -0.34
SSR4P1-202ENST00000429427 SLC50A1Q9BRV3 221 aa12.93□□□□□ -0.34
SSR4P1-202ENST00000429427 APLNQ9ULZ1 77 aa12.93□□□□□ -0.34
SSR4P1-202ENST00000429427 GOLT1BQ9Y3E0 138 aa12.93□□□□□ -0.34
SSR4P1-202ENST00000429427 RFNGQ9Y644 331 aa12.93□□□□□ -0.34
SSR4P1-202ENST00000429427 C11orf94C9JXX5 98 aa12.92□□□□□ -0.34
SSR4P1-202ENST00000429427 KIR3DS1Q14943 382 aa12.92□□□□□ -0.34
SSR4P1-202ENST00000429427 WDR61Q9GZS3 305 aaKnown RBP12.92□□□□□ -0.34
SSR4P1-202ENST00000429427 PLA2G2EQ9NZK7 142 aa12.92□□□□□ -0.34
SSR4P1-202ENST00000429427 MBD2Q9UBB5 411 aa12.92□□□□□ -0.34
SSR4P1-202ENST00000429427 DNAH6Q9C0G6 4158 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 TRAV10A0A0B4J240 114 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 IGLL5B9A064 214 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 NDUFB4O95168 129 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 PTTG1O95997 202 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 PYYP10082 97 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 FAM167A-AS1Q96KT0 104 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 SLC25A2Q9BXI2 301 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 PARD6GQ9BYG4 376 aaPredicted RBP12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 DKK2Q9UBU2 259 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 HSPB11Q9Y547 144 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 DNAH10Q8IVF4 4471 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 FRAS1Q86XX4 4008 aa12.91□□□□□ -0.34
SSR4P1-202ENST00000429427 TRBV19A0A075B6N1 114 aa12.9□□□□□ -0.34
SSR4P1-202ENST00000429427 LOC102723971A0A1B0GUV8 181 aa12.9□□□□□ -0.34
SSR4P1-202ENST00000429427 INSP01308 110 aa12.9□□□□□ -0.34
SSR4P1-202ENST00000429427 FAM222AQ5U5X8 452 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms