RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 COA6Q5JTJ3 125 aaKnown RBP7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 WIPF2Q8TF74 440 aaPredicted RBP7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 RAX2Q96IS3 184 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 MDFIQ99750 246 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 CLPSL1A2RUU4 121 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 ADARB2-AS1A8MUL3 147 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 HIST1H1BP16401 226 aaKnown RBP7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 FCGR2BP31994 310 aaPredicted RBP7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 UBE2G2P60604 165 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 LINC00305Q7Z4B0 112 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 MRPL41Q8IXM3 137 aaKnown RBP7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 THAP8Q8NA92 274 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 SRSF8Q9BRL6 282 aaKnown RBP7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 C11orf94C9JXX5 98 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 PDE6DO43924 150 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 TYMSP04818 313 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 HOXD3P31249 432 aaPredicted RBP7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 SCGB2A2Q13296 93 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 TMEM183AQ8IXX5 376 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 RNF125Q96EQ8 232 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 ZNF503Q96F45 646 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 HIST1H2BLQ99880 126 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 C19orf24Q9BVV8 132 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 ELOVL1Q9BW60 279 aa7.28□□□□□ -1.24
HMGCLL1-206ENST00000428842 CORTO00230 105 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 FABP4P15090 132 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 FAM3BP58499 235 aaPredicted RBP7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 FOXE3Q13461 319 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 PDZD11Q5EBL8 140 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 DLX4Q92988 240 aaPredicted RBP7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 TXNDC17Q9BRA2 123 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 ZFAND3Q9H8U3 227 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 KCNIP2Q9NS61 270 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 PEF1Q9UBV8 284 aaKnown RBP7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 F6UZH7 168 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 GATCO43716 136 aaKnown RBP7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 ARL14EPLP0DKL9 152 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 ETFRF1Q6IPR1 90 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 GBGT1Q8N5D6 347 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 BLNKQ8WV28 456 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 WFDC12Q8WWY7 111 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 PFDN5Q99471 154 aa7.27□□□□□ -1.25
HMGCLL1-206ENST00000428842 FAM223BA6NKX1 122 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 COX7A2P2O60397 106 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 STAG3L2P0CL84 134 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 STAG3L3P0CL85 134 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 HLA-DMBP28068 263 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 ATP5G3P48201 142 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 ACTL10Q5JWF8 245 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 LINC01551Q86U37 167 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 FAM223AQ8IWN6 122 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 PACRGQ96M98 296 aaPredicted RBP7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 JMJD8Q96S16 334 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 TRBV7-1A0A0A6YYK4 115 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 RPL29P47914 159 aaKnown RBP7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 RPEL1Q2QD12 228 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 C10orf113Q5VZT2 155 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 ADAMTSL5Q6ZMM2 481 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 MYOZ3Q8TDC0 251 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 VN1R17PQ8TDU5 208 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 SGK494Q96LW2 274 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 IMMP2LQ96T52 175 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 TRGV9Q99603 122 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 C16orf95Q9H693 158 aa7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 ZMAT5Q9UDW3 170 aaKnown RBP7.26□□□□□ -1.25
HMGCLL1-206ENST00000428842 A0A1W2PPV4 95 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 OR7C2O60412 319 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 ELANEP08246 267 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 LGALS1P09382 135 aaKnown RBP7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 TFPI2P48307 235 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 UBE2E2Q96LR5 201 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 TMEM68Q96MH6 324 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 SLC25A2Q9BXI2 301 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 SLC25A39Q9BZJ4 359 aaPredicted RBP7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 DNAJC4Q9NNZ3 241 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 A0A1W2PPQ1 181 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 SLC17A3O00476 420 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 CXorf1O96002 111 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 AMBPP02760 352 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 RAB31Q13636 194 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 JOSD1Q15040 202 aaPredicted RBP7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 KCNIP4Q6PIL6 250 aa7.25□□□□□ -1.25
HMGCLL1-206ENST00000428842 A0A0G2JLM5 398 aa7.24□□□□□ -1.25
HMGCLL1-206ENST00000428842 HYPMO75409 117 aa7.24□□□□□ -1.25
HMGCLL1-206ENST00000428842 NDUFB4O95168 129 aa7.24□□□□□ -1.25
HMGCLL1-206ENST00000428842 TOMM40O96008 361 aa7.24□□□□□ -1.25
HMGCLL1-206ENST00000428842 RPL11P62913 178 aaKnown RBP7.24□□□□□ -1.25
HMGCLL1-206ENST00000428842 COL7A1Q02388 2944 aa7.24□□□□□ -1.25
HMGCLL1-206ENST00000428842 OR1L6Q8NGR2 347 aa7.24□□□□□ -1.25
HMGCLL1-206ENST00000428842 OR1N2Q8NGR9 330 aa7.24□□□□□ -1.25
HMGCLL1-206ENST00000428842 USMG5Q96IX5 58 aa7.24□□□□□ -1.25
HMGCLL1-206ENST00000428842 FAM167A-AS1Q96KT0 104 aa7.24□□□□□ -1.25
HMGCLL1-206ENST00000428842 RNF2Q99496 336 aa7.24□□□□□ -1.25
HMGCLL1-206ENST00000428842 WI2-2373I1.2A0A1W2PRP0 233 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 XKRY2A2RUG3 117 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 IZUMO1RA6ND01 250 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 FNDC10F2Z333 226 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 FOXL1Q12952 345 aa7.23□□□□□ -1.25
HMGCLL1-206ENST00000428842 CST9LP1Q5W188 147 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms