RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 YTHDF2Q9Y5A9 579 aaKnown RBP13.14□□□□□ -0.31
PSPC1-202ENST00000427943 VPS13DQ5THJ4 4388 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 FAM240BA0A1B0GVZ2 78 aa13.13□□□□□ -0.31
PSPC1-202ENST00000427943 MRPS12O15235 138 aaKnown RBP13.13□□□□□ -0.31
PSPC1-202ENST00000427943 COX7A2P2O60397 106 aa13.13□□□□□ -0.31
PSPC1-202ENST00000427943 INSP01308 110 aa13.13□□□□□ -0.31
PSPC1-202ENST00000427943 PXDC1Q5TGL8 231 aa13.13□□□□□ -0.31
PSPC1-202ENST00000427943 LINC00305Q7Z4B0 112 aa13.13□□□□□ -0.31
PSPC1-202ENST00000427943 NIPSNAP3BQ9BS92 247 aa13.13□□□□□ -0.31
PSPC1-202ENST00000427943 DNAH6Q9C0G6 4158 aa13.13□□□□□ -0.31
PSPC1-202ENST00000427943 TRAV12-2A0A075B6T6 113 aa13.12□□□□□ -0.31
PSPC1-202ENST00000427943 CRXO43186 299 aaPredicted RBP13.12□□□□□ -0.31
PSPC1-202ENST00000427943 PRM2P04554 102 aa13.12□□□□□ -0.31
PSPC1-202ENST00000427943 MORN5Q5VZ52 161 aa13.12□□□□□ -0.31
PSPC1-202ENST00000427943 NDUFAF3Q9BU61 184 aa13.12□□□□□ -0.31
PSPC1-202ENST00000427943 TEX48A0A1B0GUV7 120 aa13.11□□□□□ -0.31
PSPC1-202ENST00000427943 ZNF705GA8MUZ8 300 aaPredicted RBP13.11□□□□□ -0.31
PSPC1-202ENST00000427943 BOLA2-SMG1P6H3BVE0 249 aa13.11□□□□□ -0.31
PSPC1-202ENST00000427943 HTN3P15516 51 aa13.11□□□□□ -0.31
PSPC1-202ENST00000427943 CAMLGP49069 296 aa13.11□□□□□ -0.31
PSPC1-202ENST00000427943 RHOBP62745 196 aa13.11□□□□□ -0.31
PSPC1-202ENST00000427943 RAB32Q13637 225 aa13.11□□□□□ -0.31
PSPC1-202ENST00000427943 PSG3Q16557 428 aa13.11□□□□□ -0.31
PSPC1-202ENST00000427943 MZT2BQ6NZ67 158 aa13.11□□□□□ -0.31
PSPC1-202ENST00000427943 NRARPQ7Z6K4 114 aa13.11□□□□□ -0.31
PSPC1-202ENST00000427943 OR8A1Q8NGG7 326 aa13.11□□□□□ -0.31
PSPC1-202ENST00000427943 TMEM37Q8WXS4 190 aa13.11□□□□□ -0.31
PSPC1-202ENST00000427943 UBE2L5PA0A1B0GUS4 154 aa13.1□□□□□ -0.31
PSPC1-202ENST00000427943 IGSF23A1L1A6 192 aa13.1□□□□□ -0.31
PSPC1-202ENST00000427943 H3BTX0 84 aa13.1□□□□□ -0.31
PSPC1-202ENST00000427943 PVALBP20472 110 aaPredicted RBP13.1□□□□□ -0.31
PSPC1-202ENST00000427943 ASAH1Q13510 395 aa13.1□□□□□ -0.31
PSPC1-202ENST00000427943 OPCMLQ14982 345 aa13.1□□□□□ -0.31
PSPC1-202ENST00000427943 MIC13Q5XKP0 118 aa13.1□□□□□ -0.31
PSPC1-202ENST00000427943 S100ZQ8WXG8 99 aa13.1□□□□□ -0.31
PSPC1-202ENST00000427943 UQCC1Q9NVA1 299 aa13.1□□□□□ -0.31
PSPC1-202ENST00000427943 RNF24Q9Y225 148 aa13.1□□□□□ -0.31
PSPC1-202ENST00000427943 SLC17A3O00476 420 aa13.09□□□□□ -0.31
PSPC1-202ENST00000427943 C10orf113Q5VZT2 155 aa13.09□□□□□ -0.31
PSPC1-202ENST00000427943 LCN15Q6UWW0 184 aa13.09□□□□□ -0.31
PSPC1-202ENST00000427943 LINC00299Q6ZSB3 139 aa13.09□□□□□ -0.31
PSPC1-202ENST00000427943 BPIFA4PQ86YQ2 179 aa13.09□□□□□ -0.31
PSPC1-202ENST00000427943 RPUSD4Q96CM3 377 aaKnown RBP13.09□□□□□ -0.31
PSPC1-202ENST00000427943 ZNF331Q9NQX6 463 aaPredicted RBP13.09□□□□□ -0.31
PSPC1-202ENST00000427943 LYRM2Q9NU23 88 aaPredicted RBP13.09□□□□□ -0.31
PSPC1-202ENST00000427943 PPP1R14DQ9NXH3 145 aa13.09□□□□□ -0.31
PSPC1-202ENST00000427943 WDR83OSQ9Y284 106 aa13.09□□□□□ -0.31
PSPC1-202ENST00000427943 CXCL2P19875 107 aa13.08□□□□□ -0.32
PSPC1-202ENST00000427943 SULT1A1P50225 295 aa13.08□□□□□ -0.32
PSPC1-202ENST00000427943 DAD1P61803 113 aa13.08□□□□□ -0.32
PSPC1-202ENST00000427943 BAXQ07812 192 aa13.08□□□□□ -0.32
PSPC1-202ENST00000427943 IL15RAQ13261 267 aa13.08□□□□□ -0.32
PSPC1-202ENST00000427943 RAB31Q13636 194 aa13.08□□□□□ -0.32
PSPC1-202ENST00000427943 SLC50A1Q9BRV3 221 aa13.08□□□□□ -0.32
PSPC1-202ENST00000427943 VWC2Q2TAL6 325 aa13.07□□□□□ -0.32
PSPC1-202ENST00000427943 Q6ZRG5 221 aa13.07□□□□□ -0.32
PSPC1-202ENST00000427943 TMEM252Q8N6L7 170 aa13.07□□□□□ -0.32
PSPC1-202ENST00000427943 ENKURQ8TC29 256 aa13.07□□□□□ -0.32
PSPC1-202ENST00000427943 DNAH10Q8IVF4 4471 aa13.06□□□□□ -0.32
PSPC1-202ENST00000427943 TRAV5A0A0B4J249 113 aa13.06□□□□□ -0.32
PSPC1-202ENST00000427943 SIX6O95475 246 aa13.06□□□□□ -0.32
PSPC1-202ENST00000427943 P0DMU3 169 aa13.06□□□□□ -0.32
PSPC1-202ENST00000427943 FAM231AP0DMU4 169 aa13.06□□□□□ -0.32
PSPC1-202ENST00000427943 FAM231CP0DMU5 169 aa13.06□□□□□ -0.32
PSPC1-202ENST00000427943 IGLC2P0DOY2 106 aa13.06□□□□□ -0.32
PSPC1-202ENST00000427943 STX12Q86Y82 276 aa13.06□□□□□ -0.32
PSPC1-202ENST00000427943 GPN1Q9HCN4 374 aaPredicted RBP13.06□□□□□ -0.32
PSPC1-202ENST00000427943 DNAJC4Q9NNZ3 241 aa13.06□□□□□ -0.32
PSPC1-202ENST00000427943 NACAE9PAV3 2078 aa13.06□□□□□ -0.32
PSPC1-202ENST00000427943 H3BQ15 152 aa13.05□□□□□ -0.32
PSPC1-202ENST00000427943 UPK1BO75841 260 aa13.05□□□□□ -0.32
PSPC1-202ENST00000427943 AZU1P20160 251 aa13.05□□□□□ -0.32
PSPC1-202ENST00000427943 FGF7P21781 194 aa13.05□□□□□ -0.32
PSPC1-202ENST00000427943 S100A11P31949 105 aa13.05□□□□□ -0.32
PSPC1-202ENST00000427943 HBG1P69891 147 aa13.05□□□□□ -0.32
PSPC1-202ENST00000427943 HBG2P69892 147 aa13.05□□□□□ -0.32
PSPC1-202ENST00000427943 OXA1LQ15070 435 aa13.05□□□□□ -0.32
PSPC1-202ENST00000427943 POM121L12Q8N7R1 296 aa13.05□□□□□ -0.32
PSPC1-202ENST00000427943 OR1L4Q8NGR5 311 aa13.05□□□□□ -0.32
PSPC1-202ENST00000427943 PARD6GQ9BYG4 376 aaPredicted RBP13.05□□□□□ -0.32
PSPC1-202ENST00000427943 SLC39A9Q9NUM3 307 aa13.05□□□□□ -0.32
PSPC1-202ENST00000427943 PRAC2D3DTV9 90 aa13.04□□□□□ -0.32
PSPC1-202ENST00000427943 HTN1P15515 57 aa13.04□□□□□ -0.32
PSPC1-202ENST00000427943 B2MP61769 119 aa13.04□□□□□ -0.32
PSPC1-202ENST00000427943 IFITM3Q01628 133 aa13.04□□□□□ -0.32
PSPC1-202ENST00000427943 LINC01587Q99440 93 aa13.04□□□□□ -0.32
PSPC1-202ENST00000427943 PFDN5Q99471 154 aa13.04□□□□□ -0.32
PSPC1-202ENST00000427943 PLAC8L1A1L4L8 177 aa13.03□□□□□ -0.32
PSPC1-202ENST00000427943 TSPOP30536 169 aa13.03□□□□□ -0.32
PSPC1-202ENST00000427943 CDKN1BP46527 198 aa13.03□□□□□ -0.32
PSPC1-202ENST00000427943 RPL29P47914 159 aaKnown RBP13.03□□□□□ -0.32
PSPC1-202ENST00000427943 KIR3DS1Q14943 382 aa13.03□□□□□ -0.32
PSPC1-202ENST00000427943 TMEM88Q6PEY1 159 aa13.03□□□□□ -0.32
PSPC1-202ENST00000427943 UBE2DNLQ8IWF7 75 aa13.03□□□□□ -0.32
PSPC1-202ENST00000427943 FAM210BQ96KR6 192 aa13.03□□□□□ -0.32
PSPC1-202ENST00000427943 PXMP4Q9Y6I8 212 aa13.03□□□□□ -0.32
PSPC1-202ENST00000427943 A6NHS1 94 aa13.02□□□□□ -0.33
PSPC1-202ENST00000427943 LYRM9A8MSI8 78 aa13.02□□□□□ -0.33
PSPC1-202ENST00000427943 DEFB130BP0DP73 79 aa13.02□□□□□ -0.33
PSPC1-202ENST00000427943 DEFB130AP0DP74 79 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms