RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 OR4S1Q8NGB4 309 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 OR51T1Q8NGJ9 327 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 OR2Y1Q8NGV0 311 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 OR4K15Q8NH41 348 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 PPP1R1CQ8WVI7 109 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 TNFAIP8L1Q8WVP5 186 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 PSMF1Q92530 271 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 SPTSSAQ969W0 71 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 APOBEC3DQ96AK3 386 aaPredicted RBP1.14□□□□□ -2.23
PTPRC-208ENST00000427110 CMBLQ96DG6 245 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 CPNE2Q96FN4 548 aaPredicted RBP1.14□□□□□ -2.23
PTPRC-208ENST00000427110 ARHGAP5-AS1Q96IT6 56 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 ABHD14BQ96IU4 210 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 C2orf50Q96LR7 162 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 LINC00052Q96N35 136 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 AQP10Q96PS8 301 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 DDA1Q9BW61 102 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 SUCNR1Q9BXA5 334 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 PECRQ9BY49 303 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 ARL6Q9H0F7 186 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 FXYD6Q9H0Q3 95 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 METTL9Q9H1A3 318 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 SMDT1Q9H4I9 107 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 NOP16Q9Y3C1 178 aaKnown RBP1.14□□□□□ -2.23
PTPRC-208ENST00000427110 WDR87Q6ZQQ6 2873 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 DSCAMO60469 2012 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 SPEGQ15772 3267 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 MYO15AQ9UKN7 3530 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 AHCTF1Q8WYP5 2266 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 DYSFO75923 2080 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 TRAV8-2A0A0B4J237 113 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 PIGBOS1A0A0B4J2F0 54 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 IGKV1-12A0A0C4DH73 117 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 A0A1B0GW64 132 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 DUXBA0A1W2PPF3 345 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM218A2RU14 115 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 SDHAF1A6NFY7 115 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 ARGFXA6NJG6 315 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 C21orf140B9A014 251 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 EEF1E1-BLOC1S5C9J1V9 151 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 F5H5K5 113 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 H3BSH0 61 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 TOR1AO14656 332 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 NDUFA2O43678 99 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 PDCD6O75340 191 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 NDUFS6O75380 124 aaKnown RBP1.13□□□□□ -2.23
PTPRC-208ENST00000427110 DEDDO75618 318 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 ADAP1O75689 374 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 CRTAPO75718 401 aaPredicted RBP1.13□□□□□ -2.23
PTPRC-208ENST00000427110 ATG12O94817 140 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 CDS2O95674 445 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 NAPSAO96009 420 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 CST4P01036 141 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 IGKV1D-12P01611 117 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 PMP2P02689 132 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 SERPINA7P05543 415 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 CTSGP08311 255 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 CTXN2P0C2S0 81 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 PET100P0DJ07 73 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 SLC25A6P12236 298 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 CCL4P13236 92 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 TPT1P13693 172 aaKnown RBP1.13□□□□□ -2.23
PTPRC-208ENST00000427110 CBR1P16152 277 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 AKR1C4P17516 323 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 BLVRBP30043 206 aaPredicted RBP1.13□□□□□ -2.23
PTPRC-208ENST00000427110 RPL12P30050 165 aaKnown RBP1.13□□□□□ -2.23
PTPRC-208ENST00000427110 TSPOP30536 169 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 RBP2P50120 134 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 SULT1A2P50226 295 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 RAB5CP51148 216 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 RBM11P57052 281 aaKnown RBP1.13□□□□□ -2.23
PTPRC-208ENST00000427110 FGF12P61328 243 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 PCBD1P61457 104 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 PSG4Q00888 419 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 MPV17LQ2QL34 196 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 BSXQ3C1V8 233 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 SCGB2B2Q4G0G5 96 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 PABPC1L2AQ5JQF8 200 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 EIF5AL1Q6IS14 154 aaKnown RBP1.13□□□□□ -2.23
PTPRC-208ENST00000427110 AAED1Q7RTV5 226 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 TMED4Q7Z7H5 227 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 KRTAP13-1Q8IUC0 172 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 LRRC18Q8N456 261 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 RPRMLQ8N4K4 120 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM156Q8N614 296 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 FER1L6-AS1Q8NA97 138 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 OR5A2Q8NGI9 324 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 OR10K1Q8NGX5 313 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 OR10D3Q8NH80 312 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 OR2V1Q8NHB1 315 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 ARL11Q969Q4 196 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 BORCS8Q96FH0 119 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 REEP6Q96HR9 211 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM56Q96MV1 263 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 GPER1Q99527 375 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 S100A13Q99584 98 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 CMSS1Q9BQ75 279 aaKnown RBP1.13□□□□□ -2.23
PTPRC-208ENST00000427110 GINS3Q9BRX5 216 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 PDCD10Q9BUL8 212 aa1.13□□□□□ -2.23
PTPRC-208ENST00000427110 ZNF471Q9BX82 626 aaPredicted RBP1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms