RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 NANOS2P60321 138 aaKnown RBP12.93□□□□□ -0.34
IGHV3-47-201ENST00000425060 BAXQ07812 192 aa12.93□□□□□ -0.34
IGHV3-47-201ENST00000425060 OR5C1Q8NGR4 320 aa12.93□□□□□ -0.34
IGHV3-47-201ENST00000425060 C11orf45Q8TAV5 145 aa12.93□□□□□ -0.34
IGHV3-47-201ENST00000425060 SLC39A9Q9NUM3 307 aa12.93□□□□□ -0.34
IGHV3-47-201ENST00000425060 ALMS1Q8TCU4 4167 aa12.93□□□□□ -0.34
IGHV3-47-201ENST00000425060 ZNF705FA8MVS1 300 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 MPDU1O75352 247 aa12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 MPC2O95563 127 aa12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 ZNF705DP0CH99 300 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 ZNF705BP0CI00 300 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 FGF7P21781 194 aa12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 HLA-DMBP28068 263 aa12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 B2MP61769 119 aa12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 BPIFA4PQ86YQ2 179 aa12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 PHLDA1Q8WV24 401 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 NEU1Q99519 415 aa12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 HRH4Q9H3N8 390 aa12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 HYDINQ4G0P3 5121 aa12.92□□□□□ -0.34
IGHV3-47-201ENST00000425060 TRAV5A0A0B4J249 113 aa12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 PTTG1O95997 202 aa12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 IGLC2P0DOY2 106 aa12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 CXCL2P19875 107 aa12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 PSG3Q16557 428 aa12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 OR1L4Q8NGR5 311 aa12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 PFDN5Q99471 154 aa12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 NPCDR1Q9BY65 106 aa12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 MFFQ9GZY8 342 aa12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 ZNF331Q9NQX6 463 aaPredicted RBP12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 ALG5Q9Y673 324 aa12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 PXMP4Q9Y6I8 212 aa12.91□□□□□ -0.34
IGHV3-47-201ENST00000425060 DUSP14O95147 198 aaKnown RBP12.9□□□□□ -0.34
IGHV3-47-201ENST00000425060 CNN1P51911 297 aaKnown RBP12.9□□□□□ -0.34
IGHV3-47-201ENST00000425060 LCN15Q6UWW0 184 aa12.9□□□□□ -0.34
IGHV3-47-201ENST00000425060 SAT2Q96F10 170 aaPredicted RBP12.9□□□□□ -0.34
IGHV3-47-201ENST00000425060 H3BQ15 152 aa12.89□□□□□ -0.35
IGHV3-47-201ENST00000425060 JTBO76095 146 aa12.89□□□□□ -0.35
IGHV3-47-201ENST00000425060 SNRPCP09234 159 aaKnown RBP12.89□□□□□ -0.35
IGHV3-47-201ENST00000425060 C1orf158Q8N1D5 194 aa12.89□□□□□ -0.35
IGHV3-47-201ENST00000425060 ZNF738Q8NE65 137 aa12.89□□□□□ -0.35
IGHV3-47-201ENST00000425060 OR11H7Q8NGC8 314 aa12.89□□□□□ -0.35
IGHV3-47-201ENST00000425060 THAP6Q8TBB0 222 aa12.89□□□□□ -0.35
IGHV3-47-201ENST00000425060 SLC50A1Q9BRV3 221 aa12.89□□□□□ -0.35
IGHV3-47-201ENST00000425060 SLC17A3O00476 420 aa12.88□□□□□ -0.35
IGHV3-47-201ENST00000425060 CLINT1Q14677 625 aa12.88□□□□□ -0.35
IGHV3-47-201ENST00000425060 OR8A1Q8NGG7 326 aa12.88□□□□□ -0.35
IGHV3-47-201ENST00000425060 LRRC20Q8TCA0 184 aa12.88□□□□□ -0.35
IGHV3-47-201ENST00000425060 WDR61Q9GZS3 305 aaKnown RBP12.88□□□□□ -0.35
IGHV3-47-201ENST00000425060 KLK5Q9Y337 293 aaPredicted RBP12.88□□□□□ -0.35
IGHV3-47-201ENST00000425060 SMIM9A6NGZ8 99 aa12.87□□□□□ -0.35
IGHV3-47-201ENST00000425060 H3BTX0 84 aa12.87□□□□□ -0.35
IGHV3-47-201ENST00000425060 CRXO43186 299 aaPredicted RBP12.87□□□□□ -0.35
IGHV3-47-201ENST00000425060 GCSAMLQ5JQS6 135 aa12.87□□□□□ -0.35
IGHV3-47-201ENST00000425060 CELA1Q9UNI1 258 aa12.87□□□□□ -0.35
IGHV3-47-201ENST00000425060 HSPB11Q9Y547 144 aa12.87□□□□□ -0.35
IGHV3-47-201ENST00000425060 PET100P0DJ07 73 aa12.86□□□□□ -0.35
IGHV3-47-201ENST00000425060 RPUSD4Q96CM3 377 aaKnown RBP12.86□□□□□ -0.35
IGHV3-47-201ENST00000425060 IGF2BP2-AS1Q96M15 143 aa12.86□□□□□ -0.35
IGHV3-47-201ENST00000425060 ZNF586Q9NXT0 402 aa12.86□□□□□ -0.35
IGHV3-47-201ENST00000425060 TMEM14CQ9P0S9 112 aa12.86□□□□□ -0.35
IGHV3-47-201ENST00000425060 MBD2Q9UBB5 411 aa12.86□□□□□ -0.35
IGHV3-47-201ENST00000425060 AMBPP02760 352 aa12.85□□□□□ -0.35
IGHV3-47-201ENST00000425060 PRB4P10163 310 aaPredicted RBP12.85□□□□□ -0.35
IGHV3-47-201ENST00000425060 RPL12P30050 165 aaKnown RBP12.85□□□□□ -0.35
IGHV3-47-201ENST00000425060 HIST1H1AQ02539 215 aaPredicted RBP12.85□□□□□ -0.35
IGHV3-47-201ENST00000425060 GUK1Q16774 197 aa12.85□□□□□ -0.35
IGHV3-47-201ENST00000425060 LINC00476Q8WZB0 136 aa12.85□□□□□ -0.35
IGHV3-47-201ENST00000425060 ATP5SQ99766 215 aa12.85□□□□□ -0.35
IGHV3-47-201ENST00000425060 GOLT1BQ9Y3E0 138 aa12.85□□□□□ -0.35
IGHV3-47-201ENST00000425060 IGHV3OR16-12A0A075B7B8 117 aa12.84□□□□□ -0.35
IGHV3-47-201ENST00000425060 M0R2Z0 102 aa12.84□□□□□ -0.35
IGHV3-47-201ENST00000425060 ZNF253O75346 499 aa12.84□□□□□ -0.35
IGHV3-47-201ENST00000425060 FCN2Q15485 313 aa12.84□□□□□ -0.35
IGHV3-47-201ENST00000425060 SPINK13Q1W4C9 94 aa12.84□□□□□ -0.35
IGHV3-47-201ENST00000425060 C12orf74Q32Q52 190 aa12.84□□□□□ -0.35
IGHV3-47-201ENST00000425060 C11orf94C9JXX5 98 aa12.83□□□□□ -0.36
IGHV3-47-201ENST00000425060 PRAC2D3DTV9 90 aa12.83□□□□□ -0.36
IGHV3-47-201ENST00000425060 BOLA2-SMG1P6H3BVE0 249 aa12.83□□□□□ -0.36
IGHV3-47-201ENST00000425060 Q6ZTC4 211 aa12.83□□□□□ -0.36
IGHV3-47-201ENST00000425060 FAM167A-AS1Q96KT0 104 aa12.83□□□□□ -0.36
IGHV3-47-201ENST00000425060 RFNGQ9Y644 331 aa12.83□□□□□ -0.36
IGHV3-47-201ENST00000425060 TRBV19A0A075B6N1 114 aa12.82□□□□□ -0.36
IGHV3-47-201ENST00000425060 TMEM189A5PLL7 270 aa12.82□□□□□ -0.36
IGHV3-47-201ENST00000425060 NDUFB4O95168 129 aa12.82□□□□□ -0.36
IGHV3-47-201ENST00000425060 HIST1H1EP10412 219 aaKnown RBP12.82□□□□□ -0.36
IGHV3-47-201ENST00000425060 MIR17HGQ75NE6 70 aa12.82□□□□□ -0.36
IGHV3-47-201ENST00000425060 C2CD4CQ8TF44 421 aa12.82□□□□□ -0.36
IGHV3-47-201ENST00000425060 SLC25A2Q9BXI2 301 aa12.82□□□□□ -0.36
IGHV3-47-201ENST00000425060 MED28Q9H204 178 aa12.82□□□□□ -0.36
IGHV3-47-201ENST00000425060 WFDC1Q9HC57 220 aa12.82□□□□□ -0.36
IGHV3-47-201ENST00000425060 HBE1P02100 147 aa12.81□□□□□ -0.36
IGHV3-47-201ENST00000425060 PYYP10082 97 aa12.81□□□□□ -0.36
IGHV3-47-201ENST00000425060 RHOBP62745 196 aa12.81□□□□□ -0.36
IGHV3-47-201ENST00000425060 BAP18Q8IXM2 172 aa12.81□□□□□ -0.36
IGHV3-47-201ENST00000425060 PARD6GQ9BYG4 376 aaPredicted RBP12.81□□□□□ -0.36
IGHV3-47-201ENST00000425060 SMIM3Q9BZL3 60 aa12.81□□□□□ -0.36
IGHV3-47-201ENST00000425060 KCNIP2Q9NS61 270 aa12.81□□□□□ -0.36
IGHV3-47-201ENST00000425060 TRAV12-2A0A075B6T6 113 aa12.8□□□□□ -0.36
IGHV3-47-201ENST00000425060 TRAV10A0A0B4J240 114 aa12.8□□□□□ -0.36
IGHV3-47-201ENST00000425060 C17orf112F2Z3M2 114 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms