RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 SDHCQ99643 169 aaPredicted RBP8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 ARL6Q9H0F7 186 aa8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 ARV1Q9H2C2 271 aa8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 PLA2G2EQ9NZK7 142 aa8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 DNAH17Q9UFH2 4485 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 PCLOQ9Y6V0 5065 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 ZNF705GA8MUZ8 300 aaPredicted RBP8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 GOSR2O14653 212 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 IL7P13232 177 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 RHOBP62745 196 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 PSG3Q16557 428 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 SOHLH1Q5JUK2 328 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 Q6ZR54 194 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 SLC50A1Q9BRV3 221 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 PPP1R14DQ9NXH3 145 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 GSKIPQ9P0R6 139 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 FAT2Q9NYQ8 4349 aa8.17□□□□□ -1.1
SQSTM1-203ENST00000422245 DNAH2Q9P225 4427 aa8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 IGLV2-18A0A075B6J9 118 aa8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 TRAV12-2A0A075B6T6 113 aa8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 MRPS12O15235 138 aaKnown RBP8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 MBPP02686 304 aaPredicted RBP8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 TAS2R60P59551 318 aa8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 ZNF846Q147U1 533 aa8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 PATE2Q6UY27 113 aa8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 LINC00305Q7Z4B0 112 aa8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 RPUSD4Q96CM3 377 aaKnown RBP8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 C16orf74Q96GX8 76 aa8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 KRTAP17-1Q9BYP8 105 aa8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 C20orf85Q9H1P6 137 aa8.16□□□□□ -1.1
SQSTM1-203ENST00000422245 NACAE9PAV3 2078 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 PLAC8L1A1L4L8 177 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 C7orf66A4D0T2 115 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 L7N2F9 121 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 AGPAT2O15120 278 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 COX7A2P2O60397 106 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 DEFB130BP0DP73 79 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 DEFB130AP0DP74 79 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 CDKN1BP46527 198 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 VAMP2P63027 116 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 ARL16Q0P5N6 197 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 BPIFA4PQ86YQ2 179 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 LINC01587Q99440 93 aa8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 ZNF331Q9NQX6 463 aaPredicted RBP8.15□□□□□ -1.1
SQSTM1-203ENST00000422245 H7BYZ3 331 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 LYRM1O43325 122 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 PRM2P04554 102 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 ATP5G1P05496 136 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 MED14OSP0DP75 135 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 ATP5G3P48201 142 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 RAB31Q13636 194 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 C10orf113Q5VZT2 155 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 ZNF493Q6ZR52 646 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 MGST2Q99735 147 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 C20orf144Q9BQM9 153 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 ATG101Q9BSB4 218 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 PXMP4Q9Y6I8 212 aa8.14□□□□□ -1.11
SQSTM1-203ENST00000422245 F5H768 121 aa8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 CCSO14618 274 aa8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 AZU1P20160 251 aa8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 CAMLGP49069 296 aa8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 CAV2P51636 162 aa8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 OPCMLQ14982 345 aa8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 C1orf134Q5TEV5 83 aa8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 OR10J6PQ8NGY7 276 aa8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 RNASE8Q8TDE3 154 aaKnown RBP8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 TMEM263Q8WUH6 116 aaKnown RBP8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 TIMM8BQ9Y5J9 83 aaPredicted RBP8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 DNAH11Q96DT5 4516 aa8.13□□□□□ -1.11
SQSTM1-203ENST00000422245 PKHD1P08F94 4074 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 CBY3A6NI87 242 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 FAM25EA8MYX2 175 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 SLC17A3O00476 420 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 PLA2G10O15496 165 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 IGLC2P0DOY2 106 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 HTN1P15515 57 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 PVALBP20472 110 aaPredicted RBP8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 BCAP31P51572 246 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 GUK1Q16774 197 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 Q6ZRG5 221 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 OR1L4Q8NGR5 311 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 ZNF431Q8TF32 576 aaPredicted RBP8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 TMEM37Q8WXS4 190 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 NUDT15Q9NV35 164 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 UQCC1Q9NVA1 299 aa8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 LSM5Q9Y4Y9 91 aaKnown RBP8.12□□□□□ -1.11
SQSTM1-203ENST00000422245 C5orf51A6NDU8 294 aa8.11□□□□□ -1.11
SQSTM1-203ENST00000422245 NUDT3O95989 172 aa8.11□□□□□ -1.11
SQSTM1-203ENST00000422245 TCRBP04435 133 aa8.11□□□□□ -1.11
SQSTM1-203ENST00000422245 MORN5Q5VZ52 161 aa8.11□□□□□ -1.11
SQSTM1-203ENST00000422245 NRARPQ7Z6K4 114 aa8.11□□□□□ -1.11
SQSTM1-203ENST00000422245 ODF3Q96PU9 254 aa8.11□□□□□ -1.11
SQSTM1-203ENST00000422245 PFDN5Q99471 154 aa8.11□□□□□ -1.11
SQSTM1-203ENST00000422245 DNAJC4Q9NNZ3 241 aa8.11□□□□□ -1.11
SQSTM1-203ENST00000422245 WDR83OSQ9Y284 106 aa8.11□□□□□ -1.11
SQSTM1-203ENST00000422245 TRAV6A0A075B6T7 132 aa8.1□□□□□ -1.11
SQSTM1-203ENST00000422245 PRAC2D3DTV9 90 aa8.1□□□□□ -1.11
SQSTM1-203ENST00000422245 H3BTX0 84 aa8.1□□□□□ -1.11
SQSTM1-203ENST00000422245 ZNF253O75346 499 aa8.1□□□□□ -1.11
SQSTM1-203ENST00000422245 CST7O76096 145 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms