RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 LINC00477Q96M19 166 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 GNB1LQ9BYB4 327 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 LSM4Q9Y4Z0 139 aaKnown RBP8.6□□□□□ -1.03
COL12A1-203ENST00000416123 A0A1W2PPI3 338 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 C15orf62A8K5M9 175 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 DEFB131AP59861 70 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 DKK1O94907 266 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 ARTNQ5T4W7 220 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 J3QKU1 62 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 IGKCP01834 107 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 TMEM170AQ8WVE7 144 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 LINC00479Q96M42 142 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 TRAV9-1A0A075B6T8 112 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 K7EM74 188 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 FAM169BQ8N8A8 192 aa8.6□□□□□ -1.03
COL12A1-203ENST00000416123 OOSP1A8MZH6 123 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 GRNP28799 593 aaKnown RBP8.59□□□□□ -1.03
COL12A1-203ENST00000416123 TMEM155Q4W5P6 130 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 NXT2Q9NPJ8 142 aaKnown RBP8.59□□□□□ -1.03
COL12A1-203ENST00000416123 DMRT1Q9Y5R6 373 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 PLCE1Q9P212 2302 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 GPR179Q6PRD1 2367 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 IGHV3-16A0A0C4DH30 117 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 FNDC4Q9H6D8 234 aaPredicted RBP8.59□□□□□ -1.03
COL12A1-203ENST00000416123 NUP210LQ5VU65 1888 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 CACNA1HO95180 2353 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 FHL1Q13642 323 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 RPP25LQ8N5L8 163 aaKnown RBP8.59□□□□□ -1.03
COL12A1-203ENST00000416123 NHP2Q9NX24 153 aaKnown RBP8.59□□□□□ -1.03
COL12A1-203ENST00000416123 RNF114Q9Y508 228 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 IGHV1-69DA0A0B4J2H0 117 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 IGHV1-69P01742 117 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 CXCL1P09341 107 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 TDGF1P3P51864 188 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 RNASE2P10153 161 aaKnown RBP8.59□□□□□ -1.03
COL12A1-203ENST00000416123 PRTN3P24158 256 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 PAX2Q02962 417 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 ORMDL2Q53FV1 153 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 Q6ZR03 302 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 XCL2Q9UBD3 114 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 Q6ZRM9 215 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 C8orf49Q96NF6 230 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 NUP35Q8NFH5 326 aa8.59□□□□□ -1.03
COL12A1-203ENST00000416123 WDR86Q86TI4 376 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 IGHV2-70DA0A0C4DH43 119 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 INSP01308 110 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 STAG3L3P0CL85 134 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 A0A1B0GWB2 263 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 SPINK13Q1W4C9 94 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 LTBP2Q14767 1821 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 NDUFS8O00217 210 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 UBE2E1P51965 193 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 CR1LQ2VPA4 569 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 S100A7L2Q5SY68 101 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 FAM120AOSQ5T036 256 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 CSTL1Q9H114 145 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 OR5A1Q8NGJ0 315 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 MBD3L1Q8WWY6 194 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 CYTL1Q9NRR1 136 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 KLK9Q9UKQ9 250 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 RNF5Q99942 180 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 CLDN16Q9Y5I7 305 aa8.58□□□□□ -1.04
COL12A1-203ENST00000416123 IFI27L1Q96BM0 104 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 DAZ1Q9NQZ3 744 aaKnown RBP8.57□□□□□ -1.04
COL12A1-203ENST00000416123 CMC4P56277 68 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-203ENST00000416123 KNCNA6PVL3 124 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 COL4A4P53420 1690 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-203ENST00000416123 TMEM14EPQ6UXP3 125 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 HIST1H2BKO60814 126 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 HIST1H2BJP06899 126 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 HIST1H2BOP23527 126 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 HIST1H2BBP33778 126 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 HIST1H2BDP58876 126 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 HIST1H2BCP62807 126 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 HIST2H2BEQ16778 126 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-203ENST00000416123 HIST1H2BHQ93079 126 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-203ENST00000416123 HIST1H2BNQ99877 126 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 HIST1H2BMQ99879 126 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 CITED2Q99967 270 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-203ENST00000416123 C17orf58Q2M2W7 97 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 FOXL2NBQ6ZUU3 175 aa8.57□□□□□ -1.04
COL12A1-203ENST00000416123 TRBV6-6A0A0A6YYG2 114 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 LINC01619G3V211 115 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 RPL36AP83881 106 aaKnown RBP8.56□□□□□ -1.04
COL12A1-203ENST00000416123 IGFL3Q6UXB1 125 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 MRAPQ8TCY5 172 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 RPL36ALQ969Q0 106 aaKnown RBP8.56□□□□□ -1.04
COL12A1-203ENST00000416123 MALRD1Q5VYJ5 2156 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 TRAV12-2A0A075B6T6 113 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 NDUFS7O75251 213 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 TPSG1Q9NRR2 321 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 IGKV1-6A0A0C4DH72 117 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 DIAPH2-AS1Q14236 149 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 C1orf159Q96HA4 380 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 H3BUT2 72 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 WT1P19544 449 aaPredicted RBP8.56□□□□□ -1.04
COL12A1-203ENST00000416123 MCRIP2Q9BUT9 160 aaKnown RBP8.56□□□□□ -1.04
COL12A1-203ENST00000416123 TCF15Q12870 199 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms