RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 MANBALQ9NQG1 85 aa15.28■□□□□ 0.04
PTPRU-203ENST00000415600 VAX2Q9UIW0 290 aa15.28■□□□□ 0.04
PTPRU-203ENST00000415600 I3L2K1 104 aa15.28■□□□□ 0.04
PTPRU-203ENST00000415600 FCGR2BP31994 310 aaPredicted RBP15.28■□□□□ 0.04
PTPRU-203ENST00000415600 ATRAIDQ6UW56 229 aa15.28■□□□□ 0.04
PTPRU-203ENST00000415600 CHRDL1Q9BU40 450 aa15.28■□□□□ 0.04
PTPRU-203ENST00000415600 NDUFS6O75380 124 aaKnown RBP15.27■□□□□ 0.03
PTPRU-203ENST00000415600 SNAPINO95295 136 aa15.27■□□□□ 0.03
PTPRU-203ENST00000415600 IGHV3-48P01763 117 aa15.27■□□□□ 0.03
PTPRU-203ENST00000415600 SELENOTP62341 195 aa15.27■□□□□ 0.03
PTPRU-203ENST00000415600 TRGV9Q99603 122 aa15.27■□□□□ 0.03
PTPRU-203ENST00000415600 NKX6-2Q9C056 277 aaPredicted RBP15.27■□□□□ 0.03
PTPRU-203ENST00000415600 TMPRSS5Q9H3S3 457 aa15.27■□□□□ 0.03
PTPRU-203ENST00000415600 GATA2P23769 480 aaPredicted RBP15.26■□□□□ 0.03
PTPRU-203ENST00000415600 CMC4P56277 68 aaPredicted RBP15.26■□□□□ 0.03
PTPRU-203ENST00000415600 SEPSECSQ9HD40 501 aaKnown RBP15.26■□□□□ 0.03
PTPRU-203ENST00000415600 TENM2Q9NT68 2774 aa15.26■□□□□ 0.03
PTPRU-203ENST00000415600 UBE2CO00762 179 aa15.25■□□□□ 0.03
PTPRU-203ENST00000415600 GNG7O60262 68 aa15.25■□□□□ 0.03
PTPRU-203ENST00000415600 SCGB2A1O75556 95 aa15.25■□□□□ 0.03
PTPRU-203ENST00000415600 CXorf1O96002 111 aa15.25■□□□□ 0.03
PTPRU-203ENST00000415600 CTSGP08311 255 aa15.25■□□□□ 0.03
PTPRU-203ENST00000415600 OR5G3P0C626 314 aa15.25■□□□□ 0.03
PTPRU-203ENST00000415600 ADMP35318 185 aa15.25■□□□□ 0.03
PTPRU-203ENST00000415600 NPBWR1P48145 328 aa15.25■□□□□ 0.03
PTPRU-203ENST00000415600 RNF2Q99496 336 aa15.25■□□□□ 0.03
PTPRU-203ENST00000415600 FUT9Q9Y231 359 aa15.25■□□□□ 0.03
PTPRU-203ENST00000415600 SOHLH1Q5JUK2 328 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 OR4X1Q8NH49 305 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 GATAD1Q8WUU5 269 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 F8W735 103 aaPredicted RBP15.24■□□□□ 0.03
PTPRU-203ENST00000415600 ARL14EPLP0DKL9 152 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 ZNF90Q03938 601 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 FAM78BQ5VT40 261 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 SPATA31B1PQ5VZV4 182 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 IQCF2Q8IXL9 164 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 CYB561D1Q8N8Q1 229 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 PFDN5Q99471 154 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 MRPL32Q9BYC8 188 aaKnown RBP15.24■□□□□ 0.03
PTPRU-203ENST00000415600 SMPXQ9UHP9 88 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 TP53TG1Q9Y2A0 90 aa15.24■□□□□ 0.03
PTPRU-203ENST00000415600 IGHV7-4-1A0A0J9YVY3 117 aa15.23■□□□□ 0.03
PTPRU-203ENST00000415600 MEF2BQ02080 365 aaPredicted RBP15.23■□□□□ 0.03
PTPRU-203ENST00000415600 Q6ZWC4 215 aa15.23■□□□□ 0.03
PTPRU-203ENST00000415600 CLRN3Q8NCR9 226 aa15.23■□□□□ 0.03
PTPRU-203ENST00000415600 OR1L4Q8NGR5 311 aa15.23■□□□□ 0.03
PTPRU-203ENST00000415600 KIR2DL5BA0A0G2JN68 375 aa15.22■□□□□ 0.03
PTPRU-203ENST00000415600 KIR2DL5BA0A0G2JPC4 375 aa15.22■□□□□ 0.03
PTPRU-203ENST00000415600 ZNF207O43670 478 aaKnown RBP15.22■□□□□ 0.03
PTPRU-203ENST00000415600 PAFAH1B2P68402 229 aa15.22■□□□□ 0.03
PTPRU-203ENST00000415600 MIR17HGQ75NE6 70 aa15.22■□□□□ 0.03
PTPRU-203ENST00000415600 KIR2DL5AQ8N109 375 aa15.22■□□□□ 0.03
PTPRU-203ENST00000415600 KIR2DL5BQ8NHK3 375 aa15.22■□□□□ 0.03
PTPRU-203ENST00000415600 TMEM37Q8WXS4 190 aa15.22■□□□□ 0.03
PTPRU-203ENST00000415600 RHPN1-AS1Q9BWJ2 59 aa15.22■□□□□ 0.03
PTPRU-203ENST00000415600 IGHV3OR16-8A0A075B7F1 116 aa15.21■□□□□ 0.03
PTPRU-203ENST00000415600 OVOL2Q9BRP0 275 aa15.21■□□□□ 0.03
PTPRU-203ENST00000415600 DNAJC4Q9NNZ3 241 aa15.21■□□□□ 0.03
PTPRU-203ENST00000415600 CSMD3Q7Z407 3707 aa15.21■□□□□ 0.03
PTPRU-203ENST00000415600 DYNC2H1Q8NCM8 4307 aaKnown RBP15.21■□□□□ 0.02
PTPRU-203ENST00000415600 PAGE4O60829 102 aa15.2■□□□□ 0.02
PTPRU-203ENST00000415600 CLN5O75503 358 aa15.2■□□□□ 0.02
PTPRU-203ENST00000415600 IGLC1P0CG04 106 aa15.2■□□□□ 0.02
PTPRU-203ENST00000415600 GCHFRP30047 84 aa15.2■□□□□ 0.02
PTPRU-203ENST00000415600 TAS2R45P59539 299 aa15.2■□□□□ 0.02
PTPRU-203ENST00000415600 BTN1A1Q13410 526 aa15.2■□□□□ 0.02
PTPRU-203ENST00000415600 FAM90A2PQ658T7 463 aa15.2■□□□□ 0.02
PTPRU-203ENST00000415600 TMEM250H0YL14 139 aa15.19■□□□□ 0.02
PTPRU-203ENST00000415600 SPRY2O43597 315 aa15.19■□□□□ 0.02
PTPRU-203ENST00000415600 COX7A2P2O60397 106 aa15.19■□□□□ 0.02
PTPRU-203ENST00000415600 PLP1P60201 277 aa15.19■□□□□ 0.02
PTPRU-203ENST00000415600 PQLC2Q6ZP29 291 aa15.19■□□□□ 0.02
PTPRU-203ENST00000415600 TXNDC17Q9BRA2 123 aa15.19■□□□□ 0.02
PTPRU-203ENST00000415600 CHEK1O14757 476 aa15.19■□□□□ 0.02
PTPRU-203ENST00000415600 CEBPGP53567 150 aa15.19■□□□□ 0.02
PTPRU-203ENST00000415600 C10orf113Q5VZT2 155 aa15.19■□□□□ 0.02
PTPRU-203ENST00000415600 PATE2Q6UY27 113 aa15.19■□□□□ 0.02
PTPRU-203ENST00000415600 ELOA3CA0A087WX78 387 aaPredicted RBP15.18■□□□□ 0.02
PTPRU-203ENST00000415600 ODF3L2Q3SX64 289 aa15.18■□□□□ 0.02
PTPRU-203ENST00000415600 ZNF600Q6ZNG1 722 aa15.18■□□□□ 0.02
PTPRU-203ENST00000415600 WFDC3Q8IUB2 231 aa15.18■□□□□ 0.02
PTPRU-203ENST00000415600 TMEM167BQ9NRX6 74 aa15.18■□□□□ 0.02
PTPRU-203ENST00000415600 DNASE2O00115 360 aaPredicted RBP15.17■□□□□ 0.02
PTPRU-203ENST00000415600 FABP1P07148 127 aa15.17■□□□□ 0.02
PTPRU-203ENST00000415600 DOK5Q9P104 306 aa15.17■□□□□ 0.02
PTPRU-203ENST00000415600 ARL2-SNX15V9GYD0 113 aa15.17■□□□□ 0.02
PTPRU-203ENST00000415600 TRAV30A0A087WSZ9 112 aa15.16■□□□□ 0.02
PTPRU-203ENST00000415600 C11orf94C9JXX5 98 aa15.16■□□□□ 0.02
PTPRU-203ENST00000415600 H3BQ15 152 aa15.16■□□□□ 0.02
PTPRU-203ENST00000415600 ZNF503Q96F45 646 aa15.16■□□□□ 0.02
PTPRU-203ENST00000415600 PUS1Q9Y606 427 aaKnown RBP eCLIP15.16■□□□□ 0.02
PTPRU-203ENST00000415600 IGKV1-17P01599 117 aa15.15■□□□□ 0.02
PTPRU-203ENST00000415600 UBE2G2P60604 165 aa15.15■□□□□ 0.02
PTPRU-203ENST00000415600 DEFB135Q30KP9 77 aa15.15■□□□□ 0.02
PTPRU-203ENST00000415600 TIGITQ495A1 244 aa15.15■□□□□ 0.02
PTPRU-203ENST00000415600 SUN5Q8TC36 379 aa15.15■□□□□ 0.02
PTPRU-203ENST00000415600 FAM167A-AS1Q96KT0 104 aa15.15■□□□□ 0.02
PTPRU-203ENST00000415600 NIPSNAP3BQ9BS92 247 aa15.15■□□□□ 0.02
PTPRU-203ENST00000415600 SLC25A2Q9BXI2 301 aa15.15■□□□□ 0.02
PTPRU-203ENST00000415600 IGHV3-49A0A0A0MS15 119 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms