RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 PTTG2Q9NZH5 202 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 WDR83OSQ9Y284 106 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 VPS13DQ5THJ4 4388 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 BIRC6Q9NR09 4857 aa14.04□□□□□ -0.16
TSPAN4-209ENST00000409543 IGHV4-4A0A075B6R2 117 aa14.04□□□□□ -0.16
TSPAN4-209ENST00000409543 HBE1P02100 147 aa14.04□□□□□ -0.16
TSPAN4-209ENST00000409543 CXCL2P19875 107 aa14.04□□□□□ -0.16
TSPAN4-209ENST00000409543 S100A11P31949 105 aa14.04□□□□□ -0.16
TSPAN4-209ENST00000409543 EMP1P54849 157 aa14.04□□□□□ -0.16
TSPAN4-209ENST00000409543 PSG3Q16557 428 aa14.04□□□□□ -0.16
TSPAN4-209ENST00000409543 NRARPQ7Z6K4 114 aa14.04□□□□□ -0.16
TSPAN4-209ENST00000409543 TMEM252Q8N6L7 170 aa14.04□□□□□ -0.16
TSPAN4-209ENST00000409543 TEX48A0A1B0GUV7 120 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 IGSF23A1L1A6 192 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 PRR20EP86478 221 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 PRR20CP86479 221 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 PRR20DP86480 221 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 PRR20BP86481 221 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 PRR20AP86496 221 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 C10orf113Q5VZT2 155 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 Q6ZRG5 221 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 STX12Q86Y82 276 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 BPIFA4PQ86YQ2 179 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 DNAJC4Q9NNZ3 241 aa14.03□□□□□ -0.16
TSPAN4-209ENST00000409543 LOC102723971A0A1B0GUV8 181 aa14.02□□□□□ -0.17
TSPAN4-209ENST00000409543 CRXO43186 299 aaPredicted RBP14.02□□□□□ -0.17
TSPAN4-209ENST00000409543 HBG1P69891 147 aa14.02□□□□□ -0.17
TSPAN4-209ENST00000409543 HBG2P69892 147 aa14.02□□□□□ -0.17
TSPAN4-209ENST00000409543 IFITM3Q01628 133 aa14.02□□□□□ -0.17
TSPAN4-209ENST00000409543 SPINK13Q1W4C9 94 aa14.02□□□□□ -0.17
TSPAN4-209ENST00000409543 RRN3P1Q2M238 152 aa14.02□□□□□ -0.17
TSPAN4-209ENST00000409543 LCN15Q6UWW0 184 aa14.02□□□□□ -0.17
TSPAN4-209ENST00000409543 OR8A1Q8NGG7 326 aa14.02□□□□□ -0.17
TSPAN4-209ENST00000409543 TMEM208Q9BTX3 173 aa14.02□□□□□ -0.17
TSPAN4-209ENST00000409543 DKK2Q9UBU2 259 aa14.02□□□□□ -0.17
TSPAN4-209ENST00000409543 M0R2Z0 102 aa14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 INSP01308 110 aa14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 RPL29P47914 159 aaKnown RBP14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 HIST1H1AQ02539 215 aaPredicted RBP14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 OPCMLQ14982 345 aa14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 ATP6V1FQ16864 119 aa14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 FAM222AQ5U5X8 452 aa14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 MORN5Q5VZ52 161 aa14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 MIC13Q5XKP0 118 aa14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 CHAC2Q8WUX2 184 aa14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 RPUSD4Q96CM3 377 aaKnown RBP14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 SLC50A1Q9BRV3 221 aa14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 ZNF331Q9NQX6 463 aaPredicted RBP14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 KMT2AQ03164 3969 aa14.01□□□□□ -0.17
TSPAN4-209ENST00000409543 UBE2L5PA0A1B0GUS4 154 aa14□□□□□ -0.17
TSPAN4-209ENST00000409543 BOLA2-SMG1P6H3BVE0 249 aa14□□□□□ -0.17
TSPAN4-209ENST00000409543 PRAF2O60831 178 aa14□□□□□ -0.17
TSPAN4-209ENST00000409543 B2MP61769 119 aa14□□□□□ -0.17
TSPAN4-209ENST00000409543 OR1L4Q8NGR5 311 aa14□□□□□ -0.17
TSPAN4-209ENST00000409543 NIPSNAP3BQ9BS92 247 aa14□□□□□ -0.17
TSPAN4-209ENST00000409543 IGLC2P0DOY2 106 aa13.99□□□□□ -0.17
TSPAN4-209ENST00000409543 RHOBP62745 196 aa13.99□□□□□ -0.17
TSPAN4-209ENST00000409543 BAXQ07812 192 aa13.99□□□□□ -0.17
TSPAN4-209ENST00000409543 OXA1LQ15070 435 aa13.99□□□□□ -0.17
TSPAN4-209ENST00000409543 PFDN5Q99471 154 aa13.99□□□□□ -0.17
TSPAN4-209ENST00000409543 SLC39A9Q9NUM3 307 aa13.99□□□□□ -0.17
TSPAN4-209ENST00000409543 YTHDF2Q9Y5A9 579 aaKnown RBP13.99□□□□□ -0.17
TSPAN4-209ENST00000409543 INMT-MINDY4F8WBC2 141 aa13.98□□□□□ -0.17
TSPAN4-209ENST00000409543 SIX6O95475 246 aa13.98□□□□□ -0.17
TSPAN4-209ENST00000409543 RLN2P04090 185 aa13.98□□□□□ -0.17
TSPAN4-209ENST00000409543 SNRPCP09234 159 aaKnown RBP13.98□□□□□ -0.17
TSPAN4-209ENST00000409543 BAP18Q8IXM2 172 aa13.98□□□□□ -0.17
TSPAN4-209ENST00000409543 NDUFAF3Q9BU61 184 aa13.98□□□□□ -0.17
TSPAN4-209ENST00000409543 NMES1Q9C002 83 aa13.98□□□□□ -0.17
TSPAN4-209ENST00000409543 PPP1R14DQ9NXH3 145 aa13.98□□□□□ -0.17
TSPAN4-209ENST00000409543 TRAV5A0A0B4J249 113 aa13.97□□□□□ -0.17
TSPAN4-209ENST00000409543 H3BQ15 152 aa13.97□□□□□ -0.17
TSPAN4-209ENST00000409543 MPDU1O75352 247 aa13.97□□□□□ -0.17
TSPAN4-209ENST00000409543 GUK1Q16774 197 aa13.97□□□□□ -0.17
TSPAN4-209ENST00000409543 SAT2Q96F10 170 aaPredicted RBP13.97□□□□□ -0.17
TSPAN4-209ENST00000409543 MARVELD1Q9BSK0 173 aa13.97□□□□□ -0.17
TSPAN4-209ENST00000409543 PXMP4Q9Y6I8 212 aa13.97□□□□□ -0.17
TSPAN4-209ENST00000409543 TRAV12-2A0A075B6T6 113 aa13.96□□□□□ -0.17
TSPAN4-209ENST00000409543 ZNF705GA8MUZ8 300 aaPredicted RBP13.96□□□□□ -0.17
TSPAN4-209ENST00000409543 E5RGE8 158 aa13.96□□□□□ -0.17
TSPAN4-209ENST00000409543 SLC17A3O00476 420 aa13.96□□□□□ -0.17
TSPAN4-209ENST00000409543 FGF7P21781 194 aa13.96□□□□□ -0.17
TSPAN4-209ENST00000409543 TSPOP30536 169 aa13.96□□□□□ -0.17
TSPAN4-209ENST00000409543 CYCSP99999 105 aaKnown RBP13.96□□□□□ -0.17
TSPAN4-209ENST00000409543 FAM210BQ96KR6 192 aa13.96□□□□□ -0.17
TSPAN4-209ENST00000409543 SLC25A31Q9H0C2 315 aa13.96□□□□□ -0.17
TSPAN4-209ENST00000409543 PLA2G2EQ9NZK7 142 aa13.96□□□□□ -0.17
TSPAN4-209ENST00000409543 H3BTX0 84 aa13.95□□□□□ -0.18
TSPAN4-209ENST00000409543 NHLH2Q02577 135 aa13.95□□□□□ -0.18
TSPAN4-209ENST00000409543 TMEM256Q8N2U0 113 aa13.95□□□□□ -0.18
TSPAN4-209ENST00000409543 PRM2P04554 102 aa13.94□□□□□ -0.18
TSPAN4-209ENST00000409543 PRB4P10163 310 aaPredicted RBP13.94□□□□□ -0.18
TSPAN4-209ENST00000409543 CDKN1BP46527 198 aa13.94□□□□□ -0.18
TSPAN4-209ENST00000409543 DEFA1P59665 94 aa13.94□□□□□ -0.18
TSPAN4-209ENST00000409543 DEFA3P59666 94 aa13.94□□□□□ -0.18
TSPAN4-209ENST00000409543 OR10J6PQ8NGY7 276 aa13.94□□□□□ -0.18
TSPAN4-209ENST00000409543 NPCDR1Q9BY65 106 aa13.94□□□□□ -0.18
TSPAN4-209ENST00000409543 OR5AC2Q9NZP5 309 aa13.94□□□□□ -0.18
TSPAN4-209ENST00000409543 PRAC2D3DTV9 90 aa13.93□□□□□ -0.18
TSPAN4-209ENST00000409543 H0YIZ8 118 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms