RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 C16orf54Q6UWD8 224 aa12.3□□□□□ -0.44
LIMS2-205ENST00000409455 GOLT1AQ6ZVE7 132 aa12.3□□□□□ -0.44
LIMS2-205ENST00000409455 NPFFR1Q9GZQ6 430 aa12.3□□□□□ -0.44
LIMS2-205ENST00000409455 PRORYQ9H606 182 aa12.3□□□□□ -0.44
LIMS2-205ENST00000409455 THBDP07204 575 aa12.29□□□□□ -0.44
LIMS2-205ENST00000409455 IFI27P40305 119 aaPredicted RBP12.29□□□□□ -0.44
LIMS2-205ENST00000409455 GATD1Q8NB37 220 aa12.29□□□□□ -0.44
LIMS2-205ENST00000409455 FABP2P12104 132 aa12.29□□□□□ -0.44
LIMS2-205ENST00000409455 APOBEC3AP31941 199 aaPredicted RBP12.29□□□□□ -0.44
LIMS2-205ENST00000409455 TMEM108Q6UXF1 575 aa12.29□□□□□ -0.44
LIMS2-205ENST00000409455 ADAMTSL5Q6ZMM2 481 aa12.29□□□□□ -0.44
LIMS2-205ENST00000409455 C8orf46Q8TAG6 207 aa12.29□□□□□ -0.44
LIMS2-205ENST00000409455 TMEM186Q96B77 213 aa12.29□□□□□ -0.44
LIMS2-205ENST00000409455 SMG1Q96Q15 3661 aaKnown RBP12.28□□□□□ -0.44
LIMS2-205ENST00000409455 PLCE1Q9P212 2302 aa12.28□□□□□ -0.44
LIMS2-205ENST00000409455 CEACAM3P40198 252 aa12.28□□□□□ -0.44
LIMS2-205ENST00000409455 TCTAP57738 103 aa12.28□□□□□ -0.44
LIMS2-205ENST00000409455 CACNG7P62955 275 aa12.28□□□□□ -0.44
LIMS2-205ENST00000409455 SAMD13Q5VXD3 122 aa12.28□□□□□ -0.44
LIMS2-205ENST00000409455 TPPP3Q9BW30 176 aa12.28□□□□□ -0.44
LIMS2-205ENST00000409455 A0A1W2PPI3 338 aa12.28□□□□□ -0.44
LIMS2-205ENST00000409455 GATA4P43694 442 aa12.28□□□□□ -0.44
LIMS2-205ENST00000409455 Q6AWC8 147 aa12.28□□□□□ -0.44
LIMS2-205ENST00000409455 LINC00312Q9Y6C7 94 aa12.28□□□□□ -0.44
LIMS2-205ENST00000409455 COL6A6A6NMZ7 2263 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 IGLV3-9A0A075B6K5 115 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 A0A096LNJ9 63 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 OVOL3O00110 214 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 IGLV2-11P01706 119 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 FAM106CPP0CH98 169 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 FAM106AQ4KMX7 169 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 ZNF788Q6ZQV5 615 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 HIGD1AQ9Y241 93 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 LOC389332A0A1B0GUA5 103 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 CCL21O00585 134 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 CRYGCP07315 174 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 RUSC1-AS1Q66K80 236 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 HCP5Q6MZN7 132 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 PIP4P2Q8N4L2 257 aa12.27□□□□□ -0.45
LIMS2-205ENST00000409455 ROS1P08922 2347 aa12.26□□□□□ -0.45
LIMS2-205ENST00000409455 NMUP48645 174 aa12.26□□□□□ -0.45
LIMS2-205ENST00000409455 LOXL1Q08397 574 aaPredicted RBP12.26□□□□□ -0.45
LIMS2-205ENST00000409455 EXOC3-AS1Q8N2X6 119 aa12.26□□□□□ -0.45
LIMS2-205ENST00000409455 ZNF414Q96IQ9 312 aa12.26□□□□□ -0.45
LIMS2-205ENST00000409455 SIGLEC8Q9NYZ4 499 aa12.26□□□□□ -0.45
LIMS2-205ENST00000409455 LGALS7P47929 136 aa12.26□□□□□ -0.45
LIMS2-205ENST00000409455 BSPH1Q075Z2 132 aa12.26□□□□□ -0.45
LIMS2-205ENST00000409455 VMA21Q3ZAQ7 101 aa12.26□□□□□ -0.45
LIMS2-205ENST00000409455 ITPR1Q14643 2758 aa12.25□□□□□ -0.45
LIMS2-205ENST00000409455 RAI1Q7Z5J4 1906 aaPredicted RBP12.25□□□□□ -0.45
LIMS2-205ENST00000409455 TRBV6-1A0A0K0K1D8 114 aa12.25□□□□□ -0.45
LIMS2-205ENST00000409455 D6R8Y8 96 aa12.25□□□□□ -0.45
LIMS2-205ENST00000409455 SLC25A17O43808 307 aa12.25□□□□□ -0.45
LIMS2-205ENST00000409455 HOXB4P17483 251 aaPredicted RBP12.25□□□□□ -0.45
LIMS2-205ENST00000409455 TNFAIP6P98066 277 aaPredicted RBP12.25□□□□□ -0.45
LIMS2-205ENST00000409455 ARFGEF3Q5TH69 2177 aa12.25□□□□□ -0.45
LIMS2-205ENST00000409455 IGLV2-23P01705 113 aa12.25□□□□□ -0.45
LIMS2-205ENST00000409455 HBDP02042 147 aa12.25□□□□□ -0.45
LIMS2-205ENST00000409455 RPL24P83731 157 aaKnown RBP12.25□□□□□ -0.45
LIMS2-205ENST00000409455 SAMD5Q5TGI4 173 aa12.25□□□□□ -0.45
LIMS2-205ENST00000409455 Q71RC1 249 aaPredicted RBP12.25□□□□□ -0.45
LIMS2-205ENST00000409455 NUP37Q8NFH4 326 aa12.25□□□□□ -0.45
LIMS2-205ENST00000409455 INSIG2Q9Y5U4 225 aa12.25□□□□□ -0.45
LIMS2-205ENST00000409455 KALRNO60229 2985 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 SERTM2A0A1B0GWG4 89 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 K7EQM0 130 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 TNFRSF1AP19438 455 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 LYZP61626 148 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 TMEM75Q8N9X5 138 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 PRELID3AQ96N28 172 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 TMEM14CQ9P0S9 112 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 IGHV3-21A0A0B4J1V1 117 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 SMIM13P0DJ93 91 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 ZNF493Q6ZR52 646 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 PCP2Q8IVA1 136 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 TPSG1Q9NRR2 321 aa12.24□□□□□ -0.45
LIMS2-205ENST00000409455 GNG7O60262 68 aa12.23□□□□□ -0.45
LIMS2-205ENST00000409455 ORMDL3Q8N138 153 aa12.23□□□□□ -0.45
LIMS2-205ENST00000409455 IFI27L1Q96BM0 104 aa12.23□□□□□ -0.45
LIMS2-205ENST00000409455 F11RQ9Y624 299 aaKnown RBP12.23□□□□□ -0.45
LIMS2-205ENST00000409455 FAM90A27PA6NNH2 459 aa12.22□□□□□ -0.45
LIMS2-205ENST00000409455 PRSS57Q6UWY2 283 aa12.22□□□□□ -0.45
LIMS2-205ENST00000409455 TMEM190Q8WZ59 177 aa12.22□□□□□ -0.45
LIMS2-205ENST00000409455 TNFRSF14Q92956 283 aa12.22□□□□□ -0.45
LIMS2-205ENST00000409455 SLC25A39Q9BZJ4 359 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-205ENST00000409455 ZNF785A8K8V0 405 aa12.22□□□□□ -0.45
LIMS2-205ENST00000409455 CCL3L1P16619 93 aa12.22□□□□□ -0.45
LIMS2-205ENST00000409455 MEF2CQ06413 473 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-205ENST00000409455 DIAPH2-AS1Q14236 149 aa12.22□□□□□ -0.45
LIMS2-205ENST00000409455 PKD1L2Q7Z442 2459 aa12.22□□□□□ -0.45
LIMS2-205ENST00000409455 PPIAL4CA0A0B4J2A2 164 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 TEX48A0A1B0GUV7 120 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 PPIAL4GP0DN37 164 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 SCGB1A1P11684 91 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 CDSNQ15517 529 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 ADIPOQQ15848 244 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 TM4SF20Q53R12 229 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 IGHV1-46P01743 117 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 CT45A10P0DMU9 189 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 GRNP28799 593 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms