RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 Q6ZRG5 221 aa9.54□□□□□ -0.88
SDF4-203ENST00000403997 NRARPQ7Z6K4 114 aa9.54□□□□□ -0.88
SDF4-203ENST00000403997 IGF2BP2-AS1Q96M15 143 aa9.54□□□□□ -0.88
SDF4-203ENST00000403997 GPN1Q9HCN4 374 aaPredicted RBP9.54□□□□□ -0.88
SDF4-203ENST00000403997 UQCC1Q9NVA1 299 aa9.54□□□□□ -0.88
SDF4-203ENST00000403997 SNRPCP09234 159 aaKnown RBP9.53□□□□□ -0.88
SDF4-203ENST00000403997 S100A11P31949 105 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 SULT1A1P50225 295 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 RHOBP62745 196 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 HIST1H1AQ02539 215 aaPredicted RBP9.53□□□□□ -0.88
SDF4-203ENST00000403997 SPINK13Q1W4C9 94 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 RRN3P1Q2M238 152 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 C10orf113Q5VZT2 155 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 TMEM252Q8N6L7 170 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 TMEM37Q8WXS4 190 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 RNF126Q9BV68 326 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 DNAJC4Q9NNZ3 241 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 LYRM2Q9NU23 88 aaPredicted RBP9.53□□□□□ -0.88
SDF4-203ENST00000403997 PPP1R14DQ9NXH3 145 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 WDR83OSQ9Y284 106 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 KMT2AQ03164 3969 aa9.53□□□□□ -0.88
SDF4-203ENST00000403997 LOC102723971A0A1B0GUV8 181 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 IGSF23A1L1A6 192 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 MRPS12O15235 138 aaKnown RBP9.52□□□□□ -0.89
SDF4-203ENST00000403997 PRB4P10163 310 aaPredicted RBP9.52□□□□□ -0.89
SDF4-203ENST00000403997 HBG1P69891 147 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 HBG2P69892 147 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 PRR20EP86478 221 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 PRR20CP86479 221 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 PRR20DP86480 221 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 PRR20BP86481 221 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 PRR20AP86496 221 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 BAXQ07812 192 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 FAM222AQ5U5X8 452 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 MIC13Q5XKP0 118 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 STX12Q86Y82 276 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 BPIFA4PQ86YQ2 179 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 OR8A1Q8NGG7 326 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 NIPSNAP3BQ9BS92 247 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 PTTG2Q9NZH5 202 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 PLA2G2EQ9NZK7 142 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 DKK2Q9UBU2 259 aa9.52□□□□□ -0.89
SDF4-203ENST00000403997 UBE2L5PA0A1B0GUS4 154 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 TEX48A0A1B0GUV7 120 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 ZNF705GA8MUZ8 300 aaPredicted RBP9.51□□□□□ -0.89
SDF4-203ENST00000403997 SIX6O95475 246 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 INSP01308 110 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 CXCL2P19875 107 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 IFITM3Q01628 133 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 OPCMLQ14982 345 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 VWC2Q2TAL6 325 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 MORN5Q5VZ52 161 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 LCN15Q6UWW0 184 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 BAP18Q8IXM2 172 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 OR1L4Q8NGR5 311 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 RPUSD4Q96CM3 377 aaKnown RBP9.51□□□□□ -0.89
SDF4-203ENST00000403997 SLC50A1Q9BRV3 221 aa9.51□□□□□ -0.89
SDF4-203ENST00000403997 ZNF331Q9NQX6 463 aaPredicted RBP9.51□□□□□ -0.89
SDF4-203ENST00000403997 YTHDF2Q9Y5A9 579 aaKnown RBP9.51□□□□□ -0.89
SDF4-203ENST00000403997 TRAV12-2A0A075B6T6 113 aa9.5□□□□□ -0.89
SDF4-203ENST00000403997 TRAV5A0A0B4J249 113 aa9.5□□□□□ -0.89
SDF4-203ENST00000403997 H3BTX0 84 aa9.5□□□□□ -0.89
SDF4-203ENST00000403997 BOLA2-SMG1P6H3BVE0 249 aa9.5□□□□□ -0.89
SDF4-203ENST00000403997 CRXO43186 299 aaPredicted RBP9.5□□□□□ -0.89
SDF4-203ENST00000403997 RLN2P04090 185 aa9.5□□□□□ -0.89
SDF4-203ENST00000403997 PRM2P04554 102 aa9.5□□□□□ -0.89
SDF4-203ENST00000403997 FGF7P21781 194 aa9.5□□□□□ -0.89
SDF4-203ENST00000403997 RPL29P47914 159 aaKnown RBP9.5□□□□□ -0.89
SDF4-203ENST00000403997 B2MP61769 119 aa9.5□□□□□ -0.89
SDF4-203ENST00000403997 ATP6V1FQ16864 119 aa9.5□□□□□ -0.89
SDF4-203ENST00000403997 NDUFAF3Q9BU61 184 aa9.5□□□□□ -0.89
SDF4-203ENST00000403997 SLC39A9Q9NUM3 307 aa9.5□□□□□ -0.89
SDF4-203ENST00000403997 INMT-MINDY4F8WBC2 141 aa9.49□□□□□ -0.89
SDF4-203ENST00000403997 HTN3P15516 51 aa9.49□□□□□ -0.89
SDF4-203ENST00000403997 LINC01587Q99440 93 aa9.49□□□□□ -0.89
SDF4-203ENST00000403997 PFDN5Q99471 154 aa9.49□□□□□ -0.89
SDF4-203ENST00000403997 H3BQ15 152 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 SLC17A3O00476 420 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 PRAF2O60831 178 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 IGLC2P0DOY2 106 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 DAD1P61803 113 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 NHLH2Q02577 135 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 LRRC37A5PQ49AS3 106 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 OR10J6PQ8NGY7 276 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 CHAC2Q8WUX2 184 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 NMES1Q9C002 83 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 SLC25A31Q9H0C2 315 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 PXMP4Q9Y6I8 212 aa9.48□□□□□ -0.89
SDF4-203ENST00000403997 E5RGE8 158 aa9.47□□□□□ -0.89
SDF4-203ENST00000403997 MPDU1O75352 247 aa9.47□□□□□ -0.89
SDF4-203ENST00000403997 HTN1P15515 57 aa9.47□□□□□ -0.89
SDF4-203ENST00000403997 DEFA1P59665 94 aa9.47□□□□□ -0.89
SDF4-203ENST00000403997 DEFA3P59666 94 aa9.47□□□□□ -0.89
SDF4-203ENST00000403997 CYCSP99999 105 aaKnown RBP9.47□□□□□ -0.89
SDF4-203ENST00000403997 OXA1LQ15070 435 aa9.47□□□□□ -0.89
SDF4-203ENST00000403997 GUK1Q16774 197 aa9.47□□□□□ -0.89
SDF4-203ENST00000403997 SAT2Q96F10 170 aaPredicted RBP9.47□□□□□ -0.89
SDF4-203ENST00000403997 MARVELD1Q9BSK0 173 aa9.47□□□□□ -0.89
SDF4-203ENST00000403997 OR5AC2Q9NZP5 309 aa9.47□□□□□ -0.89
SDF4-203ENST00000403997 PRAC2D3DTV9 90 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms