RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZNF418Q8TF45 676 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 STARD4Q96DR4 205 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 RITA1Q96K30 269 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 CCL13Q99616 98 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 DERL1Q9BUN8 251 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 MYO18BQ8IUG5 2567 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 USP9YO00507 2555 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 IGKV1D-17A0A075B6S4 117 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 TMEM30CPA0ZSE6 113 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 TNFSF13O75888 250 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 GYPAP02724 150 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 CNTFRP26992 372 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 ZNF506Q5JVG8 444 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 ACP7Q6ZNF0 438 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 RPP25LQ8N5L8 163 aaKnown RBP4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 CLDND2Q8NHS1 167 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 PBDC1Q9BVG4 233 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 SSBP3Q9BWW4 388 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 SETD2Q9BYW2 2564 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 PIEZO1Q92508 2521 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 TLN2Q9Y4G6 2542 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 TRAV30A0A087WSZ9 112 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 TRAV8-4A0A0B4J246 113 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 P01737 135 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 LGALS1P09382 135 aaKnown RBP4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 OR1N2Q8NGR9 330 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 Q8TCH9 128 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 MBD3L1Q8WWY6 194 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 NEUROG1Q92886 237 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 PLEKHB2Q96CS7 222 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 PROCRQ9UNN8 238 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 HRNRQ86YZ3 2850 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 IGHV3-21A0A0B4J1V1 117 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 C9JAW5 83 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 RBFOX2O43251 390 aaKnown RBP eCLIP4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 SRPXP78539 464 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 C11orf42Q8N5U0 333 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 VN1R17PQ8TDU5 208 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 C17orf77Q96MU5 243 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 SLC25A33Q9BSK2 321 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 HIGD1AQ9Y241 93 aa4.84□□□□□ -1.63
TRAPPC13-202ENST00000399438 HIVEP3Q5T1R4 2406 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 CREBBPQ92793 2442 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 FLNCQ14315 2725 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 IGHV3-72A0A0B4J1Y9 119 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 LYNX1G3V0Z9 82 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 K7ENP7 123 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 SPINK4O60575 86 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 LYNX1P0DP58 116 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 PSG9Q00887 426 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 SLC35E4Q6ICL7 350 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 TMEM219Q86XT9 240 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 CIARTQ8N365 385 aaPredicted RBP4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 SLC39A9Q9NUM3 307 aa4.84□□□□□ -1.64
TRAPPC13-202ENST00000399438 ACACBO00763 2458 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 TRAV17A0A0B4J275 112 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 TEX50A0A1B0GTY4 177 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 DUXBA0A1W2PPF3 345 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 GAGE12BA1L429 117 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 GAGE12HA6NDE8 117 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 SHISA9B4DS77 424 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 LY6HO94772 140 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 IGHG2P01859 326 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 HBG1P69891 147 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 HBG2P69892 147 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 ZNF718Q3SXZ3 478 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 GFRALQ6UXV0 394 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 OR5A1Q8NGJ0 315 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 FAM215AQ9Y5M1 114 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 IQCF6A8MYZ5 107 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 ZNF737O75373 536 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 CCL3L1P16619 93 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 ATP5G3P48201 142 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 THBS3P49746 956 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 DIAPH2-AS1Q14236 149 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 ZNF146Q15072 292 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 MIC13Q5XKP0 118 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 SAXO1Q8IYX7 474 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 TAF15Q92804 592 aaKnown RBP eCLIP4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 BBC3Q96PG8 261 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 SMIM7Q9BQ49 75 aa4.83□□□□□ -1.64
TRAPPC13-202ENST00000399438 TET2Q6N021 2002 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 CSPG4Q6UVK1 2322 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 LOC102724200A0A096LPH7 203 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 TRAV26-2A0A0B4J265 109 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 MT-ND4LP03901 98 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 BRS3P32247 399 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 HMGN3Q15651 99 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 C10orf55Q5SWW7 151 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 IBA57Q5T440 356 aaKnown RBP4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 DEFB125Q8N687 156 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 SYT8Q8NBV8 401 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 MUCL1Q96DR8 90 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 C9orf85Q96MD7 179 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 C1QTNF4Q9BXJ3 329 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 WDR61Q9GZS3 305 aaKnown RBP4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 PRO1933Q9H354 126 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 GNB4Q9HAV0 340 aa4.82□□□□□ -1.64
TRAPPC13-202ENST00000399438 C9orf118A6NHY6 69 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms