RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 USP9XQ93008 2570 aaPredicted RBP10.62□□□□□ -0.71
NFKB1-202ENST00000394820 SMAGPQ0VAQ4 97 aa10.62□□□□□ -0.71
NFKB1-202ENST00000394820 SCNM1Q9BWG6 230 aa10.62□□□□□ -0.71
NFKB1-202ENST00000394820 TMEM97Q5BJF2 176 aa10.62□□□□□ -0.71
NFKB1-202ENST00000394820 SAPCD1Q5SSQ6 148 aa10.62□□□□□ -0.71
NFKB1-202ENST00000394820 MYO18BQ8IUG5 2567 aa10.62□□□□□ -0.71
NFKB1-202ENST00000394820 H0YJW9 148 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 HTN1P15515 57 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 PATE2Q6UY27 113 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 Q8N7P7 452 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 NDFIP1Q9BT67 221 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 TMEM133Q9H2Q1 129 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 LINC00527Q9UJ94 153 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 LOC107984156A0A0G2JMH3 177 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 TCF15Q12870 199 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 OCIAD2Q56VL3 154 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 ARL17AQ8IVW1 177 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 FAM57AQ8TBR7 257 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 CACNG8Q8WXS5 425 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 P0C879 139 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 Q71RC1 249 aaPredicted RBP10.61□□□□□ -0.71
NFKB1-202ENST00000394820 ZNF502Q8TBZ5 544 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 WFDC12Q8WWY7 111 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 FOXC2Q99958 501 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 C19orf24Q9BVV8 132 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 GTSF1LQ9H1H1 148 aa10.61□□□□□ -0.71
NFKB1-202ENST00000394820 SMIM27A0A1W2PRY6 76 aa10.6□□□□□ -0.71
NFKB1-202ENST00000394820 LYZL1Q6UWQ5 148 aa10.6□□□□□ -0.71
NFKB1-202ENST00000394820 SCGB1D4Q6XE38 83 aa10.6□□□□□ -0.71
NFKB1-202ENST00000394820 GTSCR1Q86UQ5 136 aa10.6□□□□□ -0.71
NFKB1-202ENST00000394820 PSG8Q9UQ74 426 aa10.6□□□□□ -0.71
NFKB1-202ENST00000394820 MGPP08493 103 aa10.6□□□□□ -0.71
NFKB1-202ENST00000394820 FABP2P12104 132 aa10.6□□□□□ -0.71
NFKB1-202ENST00000394820 FAM169BQ8N8A8 192 aa10.6□□□□□ -0.71
NFKB1-202ENST00000394820 C11orf52Q96A22 123 aa10.6□□□□□ -0.71
NFKB1-202ENST00000394820 C8orf49Q96NF6 230 aa10.6□□□□□ -0.71
NFKB1-202ENST00000394820 TET2Q6N021 2002 aaPredicted RBP10.6□□□□□ -0.71
NFKB1-202ENST00000394820 H3BVH4 76 aa10.6□□□□□ -0.71
NFKB1-202ENST00000394820 F2RL2O00254 374 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 NDUFA3O95167 84 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 ABCA2Q9BZC7 2435 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 PPIAL4CA0A0B4J2A2 164 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 F5H697 171 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 FAM106CPP0CH98 169 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 PPIAL4GP0DN37 164 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 FAM106AQ4KMX7 169 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 PPP1R27Q86WC6 154 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 OR2K2Q8NGT1 345 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 GAGE1Q13065 139 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 KLRD1Q13241 179 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 SPANXN1Q5VSR9 72 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 PRSS33Q8NF86 280 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 NGBQ9NPG2 151 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 LINC00312Q9Y6C7 94 aa10.59□□□□□ -0.71
NFKB1-202ENST00000394820 IGHV2-26A0A0B4J1V2 119 aa10.58□□□□□ -0.72
NFKB1-202ENST00000394820 C17orf100A8MU93 164 aa10.58□□□□□ -0.72
NFKB1-202ENST00000394820 K7EP13 123 aa10.58□□□□□ -0.72
NFKB1-202ENST00000394820 SLC25A48Q6ZT89 311 aaKnown RBP10.58□□□□□ -0.72
NFKB1-202ENST00000394820 SPATA12Q7Z6I5 190 aa10.58□□□□□ -0.72
NFKB1-202ENST00000394820 OR4A5Q8NH83 315 aa10.58□□□□□ -0.72
NFKB1-202ENST00000394820 FXYD5Q96DB9 178 aa10.58□□□□□ -0.72
NFKB1-202ENST00000394820 C1orf159Q96HA4 380 aa10.58□□□□□ -0.72
NFKB1-202ENST00000394820 SLC25A39Q9BZJ4 359 aaPredicted RBP10.58□□□□□ -0.72
NFKB1-202ENST00000394820 COL27A1Q8IZC6 1860 aaPredicted RBP10.58□□□□□ -0.72
NFKB1-202ENST00000394820 K7ERJ3 54 aa10.58□□□□□ -0.72
NFKB1-202ENST00000394820 ADIPOQQ15848 244 aa10.58□□□□□ -0.72
NFKB1-202ENST00000394820 GTSF1Q8WW33 167 aa10.58□□□□□ -0.72
NFKB1-202ENST00000394820 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
NFKB1-202ENST00000394820 IGLC7A0M8Q6 106 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 IGLV2-8P01709 118 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 SRSF9Q13242 221 aaKnown RBP eCLIP10.57□□□□□ -0.72
NFKB1-202ENST00000394820 BVES-AS1Q5T3Y7 98 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 HIST1H4GQ99525 98 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 ST20Q9HBF5 79 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 CENPEQ02224 2701 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 SCGB1C2P0DMR2 95 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 RPL7P18124 248 aaKnown RBP10.57□□□□□ -0.72
NFKB1-202ENST00000394820 MC5RP33032 325 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 MRPL27Q9P0M9 148 aaKnown RBP10.57□□□□□ -0.72
NFKB1-202ENST00000394820 M0R381 172 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 HLA-DMBP28068 263 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 LEPP41159 167 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 KIR3DS1Q14943 382 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 SP5Q6BEB4 398 aaPredicted RBP10.57□□□□□ -0.72
NFKB1-202ENST00000394820 PCP2Q8IVA1 136 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 GLMPQ8WWB7 406 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 FAM167A-AS1Q96KT0 104 aa10.57□□□□□ -0.72
NFKB1-202ENST00000394820 ZNF788Q6ZQV5 615 aa10.56□□□□□ -0.72
NFKB1-202ENST00000394820 NDUFA4L2Q9NRX3 87 aa10.56□□□□□ -0.72
NFKB1-202ENST00000394820 A0A0G2JLM5 398 aa10.56□□□□□ -0.72
NFKB1-202ENST00000394820 TIMM23O14925 209 aa10.56□□□□□ -0.72
NFKB1-202ENST00000394820 EMP1P54849 157 aa10.56□□□□□ -0.72
NFKB1-202ENST00000394820 TRAV30A0A087WSZ9 112 aa10.56□□□□□ -0.72
NFKB1-202ENST00000394820 C22orf46C9J442 243 aa10.56□□□□□ -0.72
NFKB1-202ENST00000394820 LOXL1Q08397 574 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-202ENST00000394820 EIF4EBP1Q13541 118 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-202ENST00000394820 ORMDL3Q8N138 153 aa10.56□□□□□ -0.72
NFKB1-202ENST00000394820 FMC1Q96HJ9 113 aa10.56□□□□□ -0.72
NFKB1-202ENST00000394820 PPP1R14DQ9NXH3 145 aa10.56□□□□□ -0.72
NFKB1-202ENST00000394820 LY96Q9Y6Y9 160 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms