RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RAB31Q13636 194 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 FAM78BQ5VT40 261 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 SPATA31B1PQ5VZV4 182 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 ZNF709Q8N972 641 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 CSNK1G2-AS1Q8NCQ2 148 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 GATAD1Q8WUU5 269 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 GPR82Q96P67 336 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 SLC25A31Q9H0C2 315 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 RFNGQ9Y644 331 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 X6R8D5 127 aa5.57□□□□□ -1.52
HMGB3P1-201ENST00000393368 IGHV3OR16-12A0A075B7B8 117 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 A0A087X0K7 114 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 IGHV4-28A0A0C4DH34 117 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 A0A0J9YX75 114 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 A6NJY4 79 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 H3BQ15 152 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 EIF3GO75821 320 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 RBMY1A1P0DJD3 496 aaKnown RBP5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 RBMY1CP0DJD4 496 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 RPL12P30050 165 aaKnown RBP5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 S100A7P31151 101 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 RPL29P47914 159 aaKnown RBP5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 CNN1P51911 297 aaKnown RBP5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 NANOS2P60321 138 aaKnown RBP5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 RBMY1FQ15415 496 aaKnown RBP5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 ATP6V1FQ16864 119 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 Q5BKY6 102 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 PXDC1Q5TGL8 231 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 EBLN2Q6P2I7 272 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 Q6ZRG5 221 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 Q8NAQ8 132 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 ZNF738Q8NE65 137 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 OR1L4Q8NGR5 311 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 LRRC20Q8TCA0 184 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 WDR61Q9GZS3 305 aaKnown RBP5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 MFFQ9GZY8 342 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 MED28Q9H204 178 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 WFDC1Q9HC57 220 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 DNAJC4Q9NNZ3 241 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 RPRMQ9NS64 109 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 HSPB11Q9Y547 144 aa5.56□□□□□ -1.52
HMGB3P1-201ENST00000393368 TENM2Q9NT68 2774 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 ELOA3CA0A087WX78 387 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 ZNF705FA8MVS1 300 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 ZNF705EA8MWA4 302 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 PRAC2D3DTV9 90 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 M0R2Z0 102 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 PET100P0DJ07 73 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 IGLC2P0DOY2 106 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 PYYP10082 97 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 PSG9Q00887 426 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 SPINK13Q1W4C9 94 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 RGS21Q2M5E4 152 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 SAMD13Q5VXD3 122 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 ZNF767PQ75MW2 155 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 MIR17HGQ75NE6 70 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 BPIFA4PQ86YQ2 179 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 ATP5SQ99766 215 aa5.55□□□□□ -1.52
HMGB3P1-201ENST00000393368 AGRNO00468 2067 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 TRAV12-2A0A075B6T6 113 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 MPDU1O75352 247 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 PRM2P04554 102 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 NUTF2P61970 127 aaKnown RBP5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 HIST1H1AQ02539 215 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 OXA1LQ15070 435 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 PSG3Q16557 428 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 TMEM41BQ5BJD5 291 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 LCN15Q6UWW0 184 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 AMTNQ6UX39 209 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 S100A7AQ86SG5 101 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 BAP18Q8IXM2 172 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 CHAC2Q8WUX2 184 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 BLNKQ8WV28 456 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 RPUSD4Q96CM3 377 aaKnown RBP5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 PFDN5Q99471 154 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 SLC25A2Q9BXI2 301 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 PARD6GQ9BYG4 376 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 C11orf68Q9H3H3 251 aaKnown RBP5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 ZNF331Q9NQX6 463 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 ZNF586Q9NXT0 402 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 CELA1Q9UNI1 258 aa5.54□□□□□ -1.52
HMGB3P1-201ENST00000393368 MIFP14174 115 aa5.53□□□□□ -1.52
HMGB3P1-201ENST00000393368 EMP1P54849 157 aa5.53□□□□□ -1.52
HMGB3P1-201ENST00000393368 RHOBP62745 196 aa5.53□□□□□ -1.52
HMGB3P1-201ENST00000393368 KIR3DS1Q14943 382 aa5.53□□□□□ -1.52
HMGB3P1-201ENST00000393368 C1orf158Q8N1D5 194 aa5.53□□□□□ -1.52
HMGB3P1-201ENST00000393368 OR8A1Q8NGG7 326 aa5.53□□□□□ -1.52
HMGB3P1-201ENST00000393368 C11orf45Q8TAV5 145 aa5.53□□□□□ -1.52
HMGB3P1-201ENST00000393368 SAT2Q96F10 170 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P1-201ENST00000393368 FAM167A-AS1Q96KT0 104 aa5.53□□□□□ -1.52
HMGB3P1-201ENST00000393368 C1QTNF4Q9BXJ3 329 aa5.53□□□□□ -1.52
HMGB3P1-201ENST00000393368 HRH4Q9H3N8 390 aa5.53□□□□□ -1.52
HMGB3P1-201ENST00000393368 TRBV19A0A075B6N1 114 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 LCE6AA0A183 80 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 A8MTW9 85 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 C17orf112F2Z3M2 114 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 SMLR1H3BR10 107 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 J3KRW8 73 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 M0R3E3 92 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 CRXO43186 299 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms