RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 SPINK13Q1W4C9 94 aa9.68□□□□□ -0.86
TRBV4-1-201ENST00000390357 LGALS9BQ3B8N2 356 aa9.68□□□□□ -0.86
TRBV4-1-201ENST00000390357 C2orf50Q96LR7 162 aa9.68□□□□□ -0.86
TRBV4-1-201ENST00000390357 UHRF2Q96PU4 802 aa9.68□□□□□ -0.86
TRBV4-1-201ENST00000390357 C20orf144Q9BQM9 153 aa9.68□□□□□ -0.86
TRBV4-1-201ENST00000390357 DNAJC4Q9NNZ3 241 aa9.68□□□□□ -0.86
TRBV4-1-201ENST00000390357 KMT2AQ03164 3969 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 C5orf51A6NDU8 294 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 BOLA2-SMG1P6H3BVE0 249 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 MRPS12O15235 138 aaKnown RBP9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 CCNKO75909 580 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 S100A11P31949 105 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 BCAP31P51572 246 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 FAM3BP58499 235 aaPredicted RBP9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 SLC38A11Q08AI6 406 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 GUK1Q16774 197 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 GSG1LQ6UXU4 331 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 C12orf45Q8N5I9 185 aaPredicted RBP9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 RNF182Q8N6D2 247 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 C15orf53Q8NAA6 179 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 OR1L4Q8NGR5 311 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 PFDN5Q99471 154 aa9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 ZNF331Q9NQX6 463 aaPredicted RBP9.67□□□□□ -0.86
TRBV4-1-201ENST00000390357 M0R2Z0 102 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 COX7A2P2O60397 106 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 H2AFB2P0C5Z0 115 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 CDKN1BP46527 198 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 CAMLGP49069 296 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 TAS2R60P59551 318 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 HIST1H1AQ02539 215 aaPredicted RBP9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 ARL16Q0P5N6 197 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 ATP6V1FQ16864 119 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 C10orf113Q5VZT2 155 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 IGFL4Q6B9Z1 124 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 MZT2BQ6NZ67 158 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 ZNF493Q6ZR52 646 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 CHAC2Q8WUX2 184 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 S100ZQ8WXG8 99 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 RPUSD4Q96CM3 377 aaKnown RBP9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 LINC01587Q99440 93 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 PXMP4Q9Y6I8 212 aa9.66□□□□□ -0.86
TRBV4-1-201ENST00000390357 TRAV6A0A075B6T7 132 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 FAM240BA0A1B0GVZ2 78 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 FAM25EA8MYX2 175 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 CAV2P51636 162 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 HBG1P69891 147 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 HBG2P69892 147 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 NRARPQ7Z6K4 114 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 UBE2DNLQ8IWF7 75 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 TMEM37Q8WXS4 190 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 MGST2Q99735 147 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 NUDT15Q9NV35 164 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 UQCC1Q9NVA1 299 aa9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 LSM5Q9Y4Y9 91 aaKnown RBP9.65□□□□□ -0.86
TRBV4-1-201ENST00000390357 CBY3A6NI87 242 aa9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 ZNF705GA8MUZ8 300 aaPredicted RBP9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 ZNF253O75346 499 aa9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 MPDU1O75352 247 aa9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 RPL29P47914 159 aaKnown RBP9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 SULT1A1P50225 295 aa9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 VWC2Q2TAL6 325 aa9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 OR10J6PQ8NGY7 276 aa9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 C16orf74Q96GX8 76 aa9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 LYRM2Q9NU23 88 aaPredicted RBP9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 WDR83OSQ9Y284 106 aa9.64□□□□□ -0.87
TRBV4-1-201ENST00000390357 H7BYZ3 331 aa9.63□□□□□ -0.87
TRBV4-1-201ENST00000390357 CCSO14618 274 aa9.63□□□□□ -0.87
TRBV4-1-201ENST00000390357 HTN3P15516 51 aa9.63□□□□□ -0.87
TRBV4-1-201ENST00000390357 IL15RAQ13261 267 aa9.63□□□□□ -0.87
TRBV4-1-201ENST00000390357 SOHLH1Q5JUK2 328 aa9.63□□□□□ -0.87
TRBV4-1-201ENST00000390357 STX12Q86Y82 276 aa9.63□□□□□ -0.87
TRBV4-1-201ENST00000390357 SAT2Q96F10 170 aaPredicted RBP9.63□□□□□ -0.87
TRBV4-1-201ENST00000390357 C11orf1Q9H5F2 150 aa9.63□□□□□ -0.87
TRBV4-1-201ENST00000390357 GPN1Q9HCN4 374 aaPredicted RBP9.63□□□□□ -0.87
TRBV4-1-201ENST00000390357 TIMM8BQ9Y5J9 83 aaPredicted RBP9.63□□□□□ -0.87
TRBV4-1-201ENST00000390357 TRAV12-2A0A075B6T6 113 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 FAM24AA6NFZ4 105 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 CST7O76096 145 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 RLN2P04090 185 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 ATP5G1P05496 136 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 IGLC2P0DOY2 106 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 ATP5G3P48201 142 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 CCDC28AQ8IWP9 274 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 BAP18Q8IXM2 172 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 TMEM252Q8N6L7 170 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 ODF3Q96PU9 254 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 SEC22CQ9BRL7 303 aa9.62□□□□□ -0.87
TRBV4-1-201ENST00000390357 OPCMLQ14982 345 aa9.61□□□□□ -0.87
TRBV4-1-201ENST00000390357 TMEM88Q6PEY1 159 aa9.61□□□□□ -0.87
TRBV4-1-201ENST00000390357 TMEM263Q8WUH6 116 aaKnown RBP9.61□□□□□ -0.87
TRBV4-1-201ENST00000390357 MRPL53Q96EL3 112 aaKnown RBP9.61□□□□□ -0.87
TRBV4-1-201ENST00000390357 SLC39A9Q9NUM3 307 aa9.61□□□□□ -0.87
TRBV4-1-201ENST00000390357 PRELID1Q9Y255 219 aa9.61□□□□□ -0.87
TRBV4-1-201ENST00000390357 PLAC8L1A1L4L8 177 aa9.6□□□□□ -0.87
TRBV4-1-201ENST00000390357 DEFB130BP0DP73 79 aa9.6□□□□□ -0.87
TRBV4-1-201ENST00000390357 DEFB130AP0DP74 79 aa9.6□□□□□ -0.87
TRBV4-1-201ENST00000390357 AZU1P20160 251 aa9.6□□□□□ -0.87
TRBV4-1-201ENST00000390357 CYCSP99999 105 aaKnown RBP9.6□□□□□ -0.87
TRBV4-1-201ENST00000390357 BAXQ07812 192 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms