RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 B2MP61769 119 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 OPCMLQ14982 345 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 OXA1LQ15070 435 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 SAMD13Q5VXD3 122 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 LINC00305Q7Z4B0 112 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 TRPT1Q86TN4 253 aaKnown RBP6.78□□□□□ -1.32
HMGN1-202ENST00000380747 ZNF709Q8N972 641 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 OR1L4Q8NGR5 311 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 SMIM3Q9BZL3 60 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 DNAJC4Q9NNZ3 241 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 SLC39A9Q9NUM3 307 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 RNF24Q9Y225 148 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 TP53TG1Q9Y2A0 90 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 HSPB11Q9Y547 144 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 PXMP4Q9Y6I8 212 aa6.78□□□□□ -1.32
HMGN1-202ENST00000380747 IGKV3-20P01619 116 aa6.77□□□□□ -1.33
HMGN1-202ENST00000380747 RPL29P47914 159 aaKnown RBP6.77□□□□□ -1.33
HMGN1-202ENST00000380747 DEFB1P60022 68 aa6.77□□□□□ -1.33
HMGN1-202ENST00000380747 XP32Q5T750 250 aa6.77□□□□□ -1.33
HMGN1-202ENST00000380747 IGFL4Q6B9Z1 124 aa6.77□□□□□ -1.33
HMGN1-202ENST00000380747 MORN3Q6PF18 240 aaPredicted RBP6.77□□□□□ -1.33
HMGN1-202ENST00000380747 LRRC20Q8TCA0 184 aa6.77□□□□□ -1.33
HMGN1-202ENST00000380747 TMEM37Q8WXS4 190 aa6.77□□□□□ -1.33
HMGN1-202ENST00000380747 RNF183Q96D59 192 aa6.77□□□□□ -1.33
HMGN1-202ENST00000380747 PFDN5Q99471 154 aa6.77□□□□□ -1.33
HMGN1-202ENST00000380747 ATP5SQ99766 215 aa6.77□□□□□ -1.33
HMGN1-202ENST00000380747 NPCDR1Q9BY65 106 aa6.77□□□□□ -1.33
HMGN1-202ENST00000380747 EDA2RQ9HAV5 297 aa6.77□□□□□ -1.33
HMGN1-202ENST00000380747 TRAV5A0A0B4J249 113 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 C17orf112F2Z3M2 114 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 H3BMM0 161 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 IFNA5P01569 189 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 SNRPCP09234 159 aaKnown RBP6.76□□□□□ -1.33
HMGN1-202ENST00000380747 GIPP09681 153 aaPredicted RBP6.76□□□□□ -1.33
HMGN1-202ENST00000380747 SPP1P10451 314 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 HLA-DRB4P13762 266 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 GDF5OSQ5U4N7 250 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 MORN5Q5VZ52 161 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 EBLN2Q6P2I7 272 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 FOXI2Q6ZQN5 318 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 RNF182Q8N6D2 247 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 OR4B1Q8NGF8 309 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 SCGB1C1Q8TD33 95 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 C20orf173Q96LM9 149 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 C17orf77Q96MU5 243 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 WDR61Q9GZS3 305 aaKnown RBP6.76□□□□□ -1.33
HMGN1-202ENST00000380747 KCNIP2Q9NS61 270 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 RPRMQ9NS64 109 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 HLA-DRB4X5D2U9 266 aa6.76□□□□□ -1.33
HMGN1-202ENST00000380747 A0A087X0K7 114 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 F6UB75 175 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 H3BTX0 84 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 MRPS12O15235 138 aaKnown RBP6.75□□□□□ -1.33
HMGN1-202ENST00000380747 C4BPBP20851 252 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 FXYD7P58549 80 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 Q5BKY6 102 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 GCSAMLQ5JQS6 135 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 ZFAND6Q6FIF0 208 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 BPIFA4PQ86YQ2 179 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 ZNF738Q8NE65 137 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 GATAD1Q8WUU5 269 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 ASB13Q8WXK3 278 aa6.75□□□□□ -1.33
HMGN1-202ENST00000380747 SAV1Q9H4B6 383 aaPredicted RBP6.75□□□□□ -1.33
HMGN1-202ENST00000380747 FXYD6-FXYD2A0A087WZ82 144 aa6.74□□□□□ -1.33
HMGN1-202ENST00000380747 A0A0J9YWU9 116 aa6.74□□□□□ -1.33
HMGN1-202ENST00000380747 GIG44P09565 113 aaPredicted RBP6.74□□□□□ -1.33
HMGN1-202ENST00000380747 HLA-DMBP28068 263 aa6.74□□□□□ -1.33
HMGN1-202ENST00000380747 NUTF2P61970 127 aaKnown RBP6.74□□□□□ -1.33
HMGN1-202ENST00000380747 TMEM41BQ5BJD5 291 aa6.74□□□□□ -1.33
HMGN1-202ENST00000380747 FAM78BQ5VT40 261 aa6.74□□□□□ -1.33
HMGN1-202ENST00000380747 OR2T35Q8NGX2 323 aa6.74□□□□□ -1.33
HMGN1-202ENST00000380747 OR11H2Q8NH07 326 aa6.74□□□□□ -1.33
HMGN1-202ENST00000380747 RARRES2Q99969 163 aa6.74□□□□□ -1.33
HMGN1-202ENST00000380747 WFDC1Q9HC57 220 aa6.74□□□□□ -1.33
HMGN1-202ENST00000380747 CLEC5AQ9NY25 188 aa6.74□□□□□ -1.33
HMGN1-202ENST00000380747 XCL2Q9UBD3 114 aa6.74□□□□□ -1.33
HMGN1-202ENST00000380747 A0A0J9YX75 114 aa6.73□□□□□ -1.33
HMGN1-202ENST00000380747 ZNF705DP0CH99 300 aaPredicted RBP6.73□□□□□ -1.33
HMGN1-202ENST00000380747 ZNF705BP0CI00 300 aaPredicted RBP6.73□□□□□ -1.33
HMGN1-202ENST00000380747 PRB4P10163 310 aaPredicted RBP6.73□□□□□ -1.33
HMGN1-202ENST00000380747 CXCL2P19875 107 aa6.73□□□□□ -1.33
HMGN1-202ENST00000380747 PSG3Q16557 428 aa6.73□□□□□ -1.33
HMGN1-202ENST00000380747 FFAR4Q5NUL3 377 aa6.73□□□□□ -1.33
HMGN1-202ENST00000380747 SPATA31B1PQ5VZV4 182 aa6.73□□□□□ -1.33
HMGN1-202ENST00000380747 LCN15Q6UWW0 184 aa6.73□□□□□ -1.33
HMGN1-202ENST00000380747 MIR17HGQ75NE6 70 aa6.73□□□□□ -1.33
HMGN1-202ENST00000380747 INO80EQ8NBZ0 244 aaPredicted RBP6.73□□□□□ -1.33
HMGN1-202ENST00000380747 AQP10Q96PS8 301 aa6.73□□□□□ -1.33
HMGN1-202ENST00000380747 SLC50A1Q9BRV3 221 aa6.73□□□□□ -1.33
HMGN1-202ENST00000380747 DNAH10Q8IVF4 4471 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 H3BQ15 152 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 SLC17A3O00476 420 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 DUSP14O95147 198 aaKnown RBP6.72□□□□□ -1.33
HMGN1-202ENST00000380747 IGLC2P0DOY2 106 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 PSG9Q00887 426 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 HIST1H1AQ02539 215 aaPredicted RBP6.72□□□□□ -1.33
HMGN1-202ENST00000380747 IL17DQ8TAD2 202 aa6.72□□□□□ -1.33
HMGN1-202ENST00000380747 SLC25A2Q9BXI2 301 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms