RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PIEZO2Q9H5I5 2752 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 SERTM2A0A1B0GWG4 89 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 NDUFB3O43676 98 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 FAM106CPP0CH98 169 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 FAM106AQ4KMX7 169 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 FAM71F2Q6NXP2 309 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 LYPD2Q6UXB3 125 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 NAA38Q9BRA0 125 aaKnown RBP8.8□□□□□ -1
CCDC40-203ENST00000374877 SLC25A39Q9BZJ4 359 aaPredicted RBP8.8□□□□□ -1
CCDC40-203ENST00000374877 FAM90A27PA6NNH2 459 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 IGLV2-11P01706 119 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 DLX1P56177 255 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 LAMA5O15230 3695 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 PPIAL4EA0A075B759 164 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 PPIAL4FP0DN26 164 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 MC5RP33032 325 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 IFI27P40305 119 aaPredicted RBP8.79□□□□□ -1
CCDC40-203ENST00000374877 MRGPRG-AS1Q2M3A8 158 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 PCNX1Q96RV3 2341 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 SAP30O75446 220 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 FXYD7P58549 80 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 C17orf77Q96MU5 243 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 MEGF9Q9H1U4 602 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 HILPDAQ9Y5L2 63 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 TMSB15BA0A087X1C1 80 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 IGLC1P0CG04 106 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 LGALS7P47929 136 aa8.79□□□□□ -1
CCDC40-203ENST00000374877 LOXL1Q08397 574 aaPredicted RBP8.79□□□□□ -1
CCDC40-203ENST00000374877 SEC11AP67812 179 aa8.78□□□□□ -1
CCDC40-203ENST00000374877 RASL11BQ9BPW5 248 aa8.78□□□□□ -1
CCDC40-203ENST00000374877 PKD1L2Q7Z442 2459 aa8.78□□□□□ -1
CCDC40-203ENST00000374877 POLEQ07864 2286 aa8.78□□□□□ -1
CCDC40-203ENST00000374877 ATMQ13315 3056 aa8.78□□□□□ -1
CCDC40-203ENST00000374877 C17orf100A8MU93 164 aa8.78□□□□□ -1
CCDC40-203ENST00000374877 RABAC1Q9UI14 185 aa8.78□□□□□ -1
CCDC40-203ENST00000374877 ZNF785A8K8V0 405 aa8.77□□□□□ -1
CCDC40-203ENST00000374877 H3BUT2 72 aa8.77□□□□□ -1
CCDC40-203ENST00000374877 GNLYP22749 145 aa8.77□□□□□ -1
CCDC40-203ENST00000374877 PLP1P60201 277 aa8.77□□□□□ -1
CCDC40-203ENST00000374877 BSPH1Q075Z2 132 aa8.77□□□□□ -1
CCDC40-203ENST00000374877 PSG8Q9UQ74 426 aa8.77□□□□□ -1
CCDC40-203ENST00000374877 MALRD1Q5VYJ5 2156 aa8.77□□□□□ -1.01
CCDC40-203ENST00000374877 VSTM5A8MXK1 200 aa8.77□□□□□ -1.01
CCDC40-203ENST00000374877 D6R8Y8 96 aa8.77□□□□□ -1.01
CCDC40-203ENST00000374877 RIPPLY3P57055 190 aa8.77□□□□□ -1.01
CCDC40-203ENST00000374877 LINC00311Q8N616 119 aa8.77□□□□□ -1.01
CCDC40-203ENST00000374877 THYN1Q9P016 225 aa8.77□□□□□ -1.01
CCDC40-203ENST00000374877 F11RQ9Y624 299 aaKnown RBP8.77□□□□□ -1.01
CCDC40-203ENST00000374877 K7EQM0 130 aa8.77□□□□□ -1.01
CCDC40-203ENST00000374877 OVOL3O00110 214 aa8.77□□□□□ -1.01
CCDC40-203ENST00000374877 CACNG7P62955 275 aa8.77□□□□□ -1.01
CCDC40-203ENST00000374877 RAB37Q96AX2 223 aa8.77□□□□□ -1.01
CCDC40-203ENST00000374877 M0R3E3 92 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 GTF2H5Q6ZYL4 71 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 CSTL1Q9H114 145 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 TMEM133Q9H2Q1 129 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 CTSZQ9UBR2 303 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 SIGLEC9Q9Y336 463 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 TMEM213A2RRL7 107 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 A6NDN8 102 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 TMEM178BH3BS89 294 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 CT45A10P0DMU9 189 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 FBXL15Q9H469 300 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 SIGLEC8Q9NYZ4 499 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 SPTA1P02549 2419 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 A0A1W2PRD5 423 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 A0A1W2PRF3 423 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 A0A1W2PRM7 423 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 IGHV1-8P0DP01 117 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 FGF6P10767 208 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 LOXP28300 417 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-203ENST00000374877 PLGLAQ15195 96 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 ADIPOQQ15848 244 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 C16orf54Q6UWD8 224 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 AMN1Q8IY45 258 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 JMJD8Q96S16 334 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 TMEM14CQ9P0S9 112 aa8.76□□□□□ -1.01
CCDC40-203ENST00000374877 TRBV19A0A075B6N1 114 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 A0A096LNJ9 63 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 CD3EP07766 207 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 CRIP1P50238 77 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 PPP1R27Q86WC6 154 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 FER1L6-AS1Q8NA97 138 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 PRELID3AQ96N28 172 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 C8orf49Q96NF6 230 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 INSIG2Q9Y5U4 225 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 NMUP48645 174 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 CDSNQ15517 529 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 WFDC3Q8IUB2 231 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 ITLN2Q8WWU7 325 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-203ENST00000374877 A1L4Q6 167 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 C9orf118A6NHY6 69 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 SHISA9B4DS77 424 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 HOXB4P17483 251 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-203ENST00000374877 KIR3DS1Q14943 382 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 PSG3Q16557 428 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 PVRIGQ6DKI7 326 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 LYZL1Q6UWQ5 148 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 PIP4P2Q8N4L2 257 aa8.75□□□□□ -1.01
CCDC40-203ENST00000374877 TMEM75Q8N9X5 138 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms