RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 OR10AG1Q8NH19 301 aa11.75□□□□□ -0.53
COL9A2-202ENST00000372748 RAB37Q96AX2 223 aa11.75□□□□□ -0.53
COL9A2-202ENST00000372748 SPTA1P02549 2419 aa11.75□□□□□ -0.53
COL9A2-202ENST00000372748 CSMD1Q96PZ7 3565 aa11.75□□□□□ -0.53
COL9A2-202ENST00000372748 TMSB15BA0A087X1C1 80 aa11.75□□□□□ -0.53
COL9A2-202ENST00000372748 AP1S3Q96PC3 154 aa11.75□□□□□ -0.53
COL9A2-202ENST00000372748 OTORQ9NRC9 128 aa11.75□□□□□ -0.53
COL9A2-202ENST00000372748 A0A096LNJ9 63 aa11.74□□□□□ -0.53
COL9A2-202ENST00000372748 C16orf97H3BN30 126 aa11.74□□□□□ -0.53
COL9A2-202ENST00000372748 FGF6P10767 208 aa11.74□□□□□ -0.53
COL9A2-202ENST00000372748 TMEM186Q96B77 213 aa11.74□□□□□ -0.53
COL9A2-202ENST00000372748 SLC25A39Q9BZJ4 359 aaPredicted RBP11.74□□□□□ -0.53
COL9A2-202ENST00000372748 PPIAL4EA0A075B759 164 aa11.74□□□□□ -0.53
COL9A2-202ENST00000372748 RBP4P02753 201 aa11.74□□□□□ -0.53
COL9A2-202ENST00000372748 PPIAL4FP0DN26 164 aa11.74□□□□□ -0.53
COL9A2-202ENST00000372748 RPL27AP46776 148 aaKnown RBP11.74□□□□□ -0.53
COL9A2-202ENST00000372748 NUP37Q8NFH4 326 aa11.74□□□□□ -0.53
COL9A2-202ENST00000372748 THYN1Q9P016 225 aa11.74□□□□□ -0.53
COL9A2-202ENST00000372748 RELNP78509 3460 aa11.74□□□□□ -0.53
COL9A2-202ENST00000372748 PRSS47A8MTI9 375 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 RIGQ13278 110 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 PRSS57Q6UWY2 283 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 A0A1W2PRD5 423 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 A0A1W2PRF3 423 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 A0A1W2PRM7 423 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 D6R8Y8 96 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 CACNG7P62955 275 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 SEC11AP67812 179 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 MEF2CQ06413 473 aaPredicted RBP11.73□□□□□ -0.53
COL9A2-202ENST00000372748 FER1L6-AS1Q8NA97 138 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 THBDP07204 575 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 CRIP1P50238 77 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 IGF2-ASQ6U949 168 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 WFDC3Q8IUB2 231 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 NBASA2RRP1 2371 aa11.73□□□□□ -0.53
COL9A2-202ENST00000372748 TMEM213A2RRL7 107 aa11.72□□□□□ -0.53
COL9A2-202ENST00000372748 TMEM178BH3BS89 294 aa11.72□□□□□ -0.53
COL9A2-202ENST00000372748 M0R3E3 92 aa11.72□□□□□ -0.53
COL9A2-202ENST00000372748 CTSZQ9UBR2 303 aa11.72□□□□□ -0.53
COL9A2-202ENST00000372748 TM4SF20Q53R12 229 aa11.72□□□□□ -0.53
COL9A2-202ENST00000372748 SIGLEC8Q9NYZ4 499 aa11.72□□□□□ -0.53
COL9A2-202ENST00000372748 PRRG2O14669 202 aa11.71□□□□□ -0.53
COL9A2-202ENST00000372748 NDUFB3O43676 98 aa11.71□□□□□ -0.53
COL9A2-202ENST00000372748 KIR3DS1Q14943 382 aa11.71□□□□□ -0.53
COL9A2-202ENST00000372748 UFSP1Q6NVU6 142 aa11.71□□□□□ -0.53
COL9A2-202ENST00000372748 C16orf54Q6UWD8 224 aa11.71□□□□□ -0.53
COL9A2-202ENST00000372748 AMN1Q8IY45 258 aa11.71□□□□□ -0.53
COL9A2-202ENST00000372748 TMEM133Q9H2Q1 129 aa11.71□□□□□ -0.53
COL9A2-202ENST00000372748 C9orf118A6NHY6 69 aa11.71□□□□□ -0.54
COL9A2-202ENST00000372748 ABHD17AQ96GS6 310 aa11.71□□□□□ -0.54
COL9A2-202ENST00000372748 C8orf49Q96NF6 230 aa11.71□□□□□ -0.54
COL9A2-202ENST00000372748 PSG8Q9UQ74 426 aa11.71□□□□□ -0.54
COL9A2-202ENST00000372748 NMUP48645 174 aa11.7□□□□□ -0.54
COL9A2-202ENST00000372748 GTF2H5Q6ZYL4 71 aa11.7□□□□□ -0.54
COL9A2-202ENST00000372748 RASL11BQ9BPW5 248 aa11.7□□□□□ -0.54
COL9A2-202ENST00000372748 F11RQ9Y624 299 aaKnown RBP11.7□□□□□ -0.54
COL9A2-202ENST00000372748 A0A0G2JLM5 398 aa11.7□□□□□ -0.54
COL9A2-202ENST00000372748 TMEM11P17152 192 aa11.7□□□□□ -0.54
COL9A2-202ENST00000372748 PLP1P60201 277 aa11.7□□□□□ -0.54
COL9A2-202ENST00000372748 PCP2Q8IVA1 136 aa11.7□□□□□ -0.54
COL9A2-202ENST00000372748 A6NDN8 102 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 MC5RP33032 325 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 S4R3C0 116 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 MALRD1Q5VYJ5 2156 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 SMKR1H3BMG3 65 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 LGALS7P47929 136 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 LYZL1Q6UWQ5 148 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 NGBQ9NPG2 151 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 TRBV19A0A075B6N1 114 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 A1L4Q6 167 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 H3BRM9 83 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 HOXB4P17483 251 aaPredicted RBP11.69□□□□□ -0.54
COL9A2-202ENST00000372748 APOBEC3AP31941 199 aaPredicted RBP11.69□□□□□ -0.54
COL9A2-202ENST00000372748 BOD1L2Q8IYS8 172 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 PRELID3AQ96N28 172 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 FBXL15Q9H469 300 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 SIGLEC9Q9Y336 463 aa11.69□□□□□ -0.54
COL9A2-202ENST00000372748 TMEM238C9JI98 176 aa11.68□□□□□ -0.54
COL9A2-202ENST00000372748 LOXP28300 417 aaPredicted RBP11.68□□□□□ -0.54
COL9A2-202ENST00000372748 OR2K2Q8NGT1 345 aa11.68□□□□□ -0.54
COL9A2-202ENST00000372748 DYNLRB1Q9NP97 96 aa11.68□□□□□ -0.54
COL9A2-202ENST00000372748 SMAD7O15105 426 aaKnown RBP11.68□□□□□ -0.54
COL9A2-202ENST00000372748 IGKV1-17P01599 117 aa11.68□□□□□ -0.54
COL9A2-202ENST00000372748 FOXC1Q12948 553 aa11.68□□□□□ -0.54
COL9A2-202ENST00000372748 GFRALQ6UXV0 394 aa11.68□□□□□ -0.54
COL9A2-202ENST00000372748 SIGLEC15Q6ZMC9 328 aa11.68□□□□□ -0.54
COL9A2-202ENST00000372748 TMEM14CQ9P0S9 112 aa11.68□□□□□ -0.54
COL9A2-202ENST00000372748 ATRXP46100 2492 aa11.68□□□□□ -0.54
COL9A2-202ENST00000372748 TEX22C9J3V5 150 aa11.67□□□□□ -0.54
COL9A2-202ENST00000372748 K7EP34 96 aa11.67□□□□□ -0.54
COL9A2-202ENST00000372748 PSG3Q16557 428 aa11.67□□□□□ -0.54
COL9A2-202ENST00000372748 PRR30Q53SZ7 412 aaPredicted RBP11.67□□□□□ -0.54
COL9A2-202ENST00000372748 PVRIGQ6DKI7 326 aa11.67□□□□□ -0.54
COL9A2-202ENST00000372748 BCL6BQ8N143 479 aaPredicted RBP11.67□□□□□ -0.54
COL9A2-202ENST00000372748 LINC00311Q8N616 119 aa11.67□□□□□ -0.54
COL9A2-202ENST00000372748 RNASE6Q93091 150 aaKnown RBP11.67□□□□□ -0.54
COL9A2-202ENST00000372748 LYNX1G3V0Z9 82 aa11.67□□□□□ -0.54
COL9A2-202ENST00000372748 IGHV1-8P0DP01 117 aa11.67□□□□□ -0.54
COL9A2-202ENST00000372748 LYNX1P0DP58 116 aa11.67□□□□□ -0.54
COL9A2-202ENST00000372748 PPP1R27Q86WC6 154 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms