RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 Q9HAA7 133 aa9.66□□□□□ -0.86
VAMP4-202ENST00000367740 SSR3Q9UNL2 185 aa9.66□□□□□ -0.86
VAMP4-202ENST00000367740 U3KQ87 197 aa9.66□□□□□ -0.86
VAMP4-202ENST00000367740 K7EQD1 137 aa9.65□□□□□ -0.86
VAMP4-202ENST00000367740 IGLV2-8P01709 118 aa9.65□□□□□ -0.86
VAMP4-202ENST00000367740 GATA2P23769 480 aaPredicted RBP9.65□□□□□ -0.86
VAMP4-202ENST00000367740 UBE2NLQ5JXB2 153 aa9.65□□□□□ -0.86
VAMP4-202ENST00000367740 KRTAP19-1Q8IUB9 90 aa9.65□□□□□ -0.86
VAMP4-202ENST00000367740 LGI3Q8N145 548 aa9.65□□□□□ -0.86
VAMP4-202ENST00000367740 PYGO2Q9BRQ0 406 aa9.65□□□□□ -0.86
VAMP4-202ENST00000367740 TMEM222Q9H0R3 208 aa9.65□□□□□ -0.86
VAMP4-202ENST00000367740 VCXQ9H320 206 aa9.65□□□□□ -0.86
VAMP4-202ENST00000367740 COPZ2Q9P299 210 aa9.65□□□□□ -0.86
VAMP4-202ENST00000367740 HHLA3Q9XRX5 114 aa9.65□□□□□ -0.86
VAMP4-202ENST00000367740 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.64□□□□□ -0.87
VAMP4-202ENST00000367740 TRAV12-3A0A0B4J271 114 aa9.64□□□□□ -0.87
VAMP4-202ENST00000367740 IBA57-AS1B1ANH7 110 aa9.64□□□□□ -0.87
VAMP4-202ENST00000367740 H3BRN7 92 aa9.64□□□□□ -0.87
VAMP4-202ENST00000367740 SPINK4O60575 86 aa9.64□□□□□ -0.87
VAMP4-202ENST00000367740 GAS8-AS1O95177 125 aa9.64□□□□□ -0.87
VAMP4-202ENST00000367740 CFDP00746 253 aaPredicted RBP9.64□□□□□ -0.87
VAMP4-202ENST00000367740 ORM2P19652 201 aa9.64□□□□□ -0.87
VAMP4-202ENST00000367740 SRIP30626 198 aa9.64□□□□□ -0.87
VAMP4-202ENST00000367740 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
VAMP4-202ENST00000367740 FHL2Q14192 279 aa9.64□□□□□ -0.87
VAMP4-202ENST00000367740 CCDC190Q86UF4 302 aa9.64□□□□□ -0.87
VAMP4-202ENST00000367740 RBPMSQ93062 196 aaKnown RBP9.64□□□□□ -0.87
VAMP4-202ENST00000367740 TMEM56-RWDD3S4R434 201 aa9.64□□□□□ -0.87
VAMP4-202ENST00000367740 A0A087X0K7 114 aa9.63□□□□□ -0.87
VAMP4-202ENST00000367740 J3KRW8 73 aa9.63□□□□□ -0.87
VAMP4-202ENST00000367740 AQP4P55087 323 aa9.63□□□□□ -0.87
VAMP4-202ENST00000367740 SLAQ13239 276 aa9.63□□□□□ -0.87
VAMP4-202ENST00000367740 GGNBP1Q5YKI7 109 aa9.63□□□□□ -0.87
VAMP4-202ENST00000367740 TMEM182Q6ZP80 229 aaPredicted RBP9.63□□□□□ -0.87
VAMP4-202ENST00000367740 SELENOHQ8IZQ5 122 aaKnown RBP9.63□□□□□ -0.87
VAMP4-202ENST00000367740 CCDC71LQ8N9Z2 235 aa9.63□□□□□ -0.87
VAMP4-202ENST00000367740 ZNF680Q8NEM1 530 aa9.63□□□□□ -0.87
VAMP4-202ENST00000367740 DTD1Q8TEA8 209 aa9.63□□□□□ -0.87
VAMP4-202ENST00000367740 GLYATL2Q8WU03 294 aa9.63□□□□□ -0.87
VAMP4-202ENST00000367740 TMEM147Q9BVK8 224 aa9.63□□□□□ -0.87
VAMP4-202ENST00000367740 B3GALNT1O75752 331 aa9.62□□□□□ -0.87
VAMP4-202ENST00000367740 ZNF415Q09FC8 603 aa9.62□□□□□ -0.87
VAMP4-202ENST00000367740 ASAH1Q13510 395 aa9.62□□□□□ -0.87
VAMP4-202ENST00000367740 VGLL1Q99990 258 aa9.62□□□□□ -0.87
VAMP4-202ENST00000367740 RBKSQ9H477 322 aa9.62□□□□□ -0.87
VAMP4-202ENST00000367740 DNAJC4Q9NNZ3 241 aa9.62□□□□□ -0.87
VAMP4-202ENST00000367740 HSPB7Q9UBY9 170 aa9.62□□□□□ -0.87
VAMP4-202ENST00000367740 KLF12Q9Y4X4 402 aa9.62□□□□□ -0.87
VAMP4-202ENST00000367740 IGHV3-38A0A0C4DH36 116 aa9.61□□□□□ -0.87
VAMP4-202ENST00000367740 LINC00854A0A1B0GVQ3 168 aa9.61□□□□□ -0.87
VAMP4-202ENST00000367740 E5RGE8 158 aa9.61□□□□□ -0.87
VAMP4-202ENST00000367740 LECT2O14960 151 aa9.61□□□□□ -0.87
VAMP4-202ENST00000367740 GYPEP15421 78 aa9.61□□□□□ -0.87
VAMP4-202ENST00000367740 RPL7P18124 248 aaKnown RBP9.61□□□□□ -0.87
VAMP4-202ENST00000367740 ACOT6Q3I5F7 207 aaPredicted RBP9.61□□□□□ -0.87
VAMP4-202ENST00000367740 LINC01556Q5JQF7 62 aa9.61□□□□□ -0.87
VAMP4-202ENST00000367740 GPR107Q5VW38 600 aa9.61□□□□□ -0.87
VAMP4-202ENST00000367740 SAMD12Q8N8I0 201 aa9.61□□□□□ -0.87
VAMP4-202ENST00000367740 BPIFCQ8NFQ6 507 aa9.61□□□□□ -0.87
VAMP4-202ENST00000367740 OR13C8Q8NGS7 320 aa9.61□□□□□ -0.87
VAMP4-202ENST00000367740 SHANK2-AS3Q9BTD1 123 aa9.61□□□□□ -0.87
VAMP4-202ENST00000367740 PRAC2D3DTV9 90 aa9.6□□□□□ -0.87
VAMP4-202ENST00000367740 TMEM127O75204 238 aa9.6□□□□□ -0.87
VAMP4-202ENST00000367740 SULT1A3P0DMM9 295 aa9.6□□□□□ -0.87
VAMP4-202ENST00000367740 SULT1A4P0DMN0 295 aa9.6□□□□□ -0.87
VAMP4-202ENST00000367740 TCL1AP56279 114 aa9.6□□□□□ -0.87
VAMP4-202ENST00000367740 TMEM268Q5VZI3 342 aa9.6□□□□□ -0.87
VAMP4-202ENST00000367740 TEPPQ6URK8 271 aa9.6□□□□□ -0.87
VAMP4-202ENST00000367740 LRRC20Q8TCA0 184 aa9.6□□□□□ -0.87
VAMP4-202ENST00000367740 ZNF431Q8TF32 576 aaPredicted RBP9.6□□□□□ -0.87
VAMP4-202ENST00000367740 MRPL32Q9BYC8 188 aaKnown RBP9.6□□□□□ -0.87
VAMP4-202ENST00000367740 MRPL16Q9NX20 251 aaKnown RBP9.6□□□□□ -0.87
VAMP4-202ENST00000367740 CACFD1Q9UGQ2 172 aa9.6□□□□□ -0.87
VAMP4-202ENST00000367740 TEX13DA0A0J9YY54 714 aaPredicted RBP9.59□□□□□ -0.87
VAMP4-202ENST00000367740 CCNKO75909 580 aa9.59□□□□□ -0.87
VAMP4-202ENST00000367740 IGLV2-11P01706 119 aa9.59□□□□□ -0.87
VAMP4-202ENST00000367740 S100A7P31151 101 aa9.59□□□□□ -0.87
VAMP4-202ENST00000367740 ATP5IP56385 69 aaPredicted RBP9.59□□□□□ -0.87
VAMP4-202ENST00000367740 STEAP1BQ6NZ63 245 aa9.59□□□□□ -0.87
VAMP4-202ENST00000367740 ZFAND1Q8TCF1 268 aa9.59□□□□□ -0.87
VAMP4-202ENST00000367740 LOC100506127A0A0U1RQW1 187 aa9.58□□□□□ -0.88
VAMP4-202ENST00000367740 CT45A10P0DMU9 189 aa9.58□□□□□ -0.88
VAMP4-202ENST00000367740 ANXA2RQ3ZCQ2 193 aa9.58□□□□□ -0.88
VAMP4-202ENST00000367740 SNX29P2Q8IUI4 249 aa9.58□□□□□ -0.88
VAMP4-202ENST00000367740 OR1S1Q8NH92 325 aa9.58□□□□□ -0.88
VAMP4-202ENST00000367740 PCNPQ8WW12 178 aaKnown RBP9.58□□□□□ -0.88
VAMP4-202ENST00000367740 ZNF331Q9NQX6 463 aaPredicted RBP9.58□□□□□ -0.88
VAMP4-202ENST00000367740 BLOC1S6Q9UL45 172 aa9.58□□□□□ -0.88
VAMP4-202ENST00000367740 MRPS12O15235 138 aaKnown RBP9.57□□□□□ -0.88
VAMP4-202ENST00000367740 LEPP41159 167 aa9.57□□□□□ -0.88
VAMP4-202ENST00000367740 RNASE10Q5GAN6 216 aaKnown RBP9.57□□□□□ -0.88
VAMP4-202ENST00000367740 MORN5Q5VZ52 161 aa9.57□□□□□ -0.88
VAMP4-202ENST00000367740 EIF4E3Q8N5X7 224 aaKnown RBP9.57□□□□□ -0.88
VAMP4-202ENST00000367740 MARCH1Q8TCQ1 289 aa9.57□□□□□ -0.88
VAMP4-202ENST00000367740 BLNKQ8WV28 456 aa9.57□□□□□ -0.88
VAMP4-202ENST00000367740 ODF3Q96PU9 254 aa9.57□□□□□ -0.88
VAMP4-202ENST00000367740 NAA60Q9H7X0 242 aa9.57□□□□□ -0.88
VAMP4-202ENST00000367740 FAT4Q6V0I7 4981 aa9.56□□□□□ -0.88
VAMP4-202ENST00000367740 TRGV4A0A0C4DH28 118 aa9.56□□□□□ -0.88
VAMP4-202ENST00000367740 PRSS46E5RG02 174 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms