RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 FAM78BQ5VT40 261 aa10.66□□□□□ -0.7
SF3B5-201ENST00000367569 MORN3Q6PF18 240 aaPredicted RBP10.66□□□□□ -0.7
SF3B5-201ENST00000367569 Q6ZRG5 221 aa10.66□□□□□ -0.7
SF3B5-201ENST00000367569 LRRC20Q8TCA0 184 aa10.66□□□□□ -0.7
SF3B5-201ENST00000367569 ATP5SQ99766 215 aa10.66□□□□□ -0.7
SF3B5-201ENST00000367569 RPRMQ9NS64 109 aa10.66□□□□□ -0.7
SF3B5-201ENST00000367569 IGHV3OR16-12A0A075B7B8 117 aa10.65□□□□□ -0.7
SF3B5-201ENST00000367569 A0A0J9YX75 114 aa10.65□□□□□ -0.7
SF3B5-201ENST00000367569 S100A7P31151 101 aa10.65□□□□□ -0.7
SF3B5-201ENST00000367569 RPL29P47914 159 aaKnown RBP10.65□□□□□ -0.7
SF3B5-201ENST00000367569 PXDC1Q5TGL8 231 aa10.65□□□□□ -0.7
SF3B5-201ENST00000367569 EBLN2Q6P2I7 272 aa10.65□□□□□ -0.7
SF3B5-201ENST00000367569 GATAD1Q8WUU5 269 aa10.65□□□□□ -0.7
SF3B5-201ENST00000367569 WDR61Q9GZS3 305 aaKnown RBP10.65□□□□□ -0.7
SF3B5-201ENST00000367569 MFFQ9GZY8 342 aa10.65□□□□□ -0.7
SF3B5-201ENST00000367569 WFDC1Q9HC57 220 aa10.65□□□□□ -0.7
SF3B5-201ENST00000367569 SEPSECSQ9HD40 501 aaKnown RBP10.65□□□□□ -0.7
SF3B5-201ENST00000367569 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.7
SF3B5-201ENST00000367569 FRAS1Q86XX4 4008 aa10.65□□□□□ -0.7
SF3B5-201ENST00000367569 A0A087X0K7 114 aa10.64□□□□□ -0.71
SF3B5-201ENST00000367569 IGHV4-28A0A0C4DH34 117 aa10.64□□□□□ -0.71
SF3B5-201ENST00000367569 CXorf65A6NEN9 183 aa10.64□□□□□ -0.71
SF3B5-201ENST00000367569 H3BQ15 152 aa10.64□□□□□ -0.71
SF3B5-201ENST00000367569 PYYP10082 97 aa10.64□□□□□ -0.71
SF3B5-201ENST00000367569 HIST1H1AQ02539 215 aaPredicted RBP10.64□□□□□ -0.71
SF3B5-201ENST00000367569 MIR17HGQ75NE6 70 aa10.64□□□□□ -0.71
SF3B5-201ENST00000367569 ZNF709Q8N972 641 aa10.64□□□□□ -0.71
SF3B5-201ENST00000367569 OR1L4Q8NGR5 311 aa10.64□□□□□ -0.71
SF3B5-201ENST00000367569 PFDN5Q99471 154 aa10.64□□□□□ -0.71
SF3B5-201ENST00000367569 ELOA3CA0A087WX78 387 aaPredicted RBP10.63□□□□□ -0.71
SF3B5-201ENST00000367569 ZNF705FA8MVS1 300 aaPredicted RBP10.63□□□□□ -0.71
SF3B5-201ENST00000367569 CNN1P51911 297 aaKnown RBP10.63□□□□□ -0.71
SF3B5-201ENST00000367569 OXA1LQ15070 435 aa10.63□□□□□ -0.71
SF3B5-201ENST00000367569 BPIFA4PQ86YQ2 179 aa10.63□□□□□ -0.71
SF3B5-201ENST00000367569 CSNK1G2-AS1Q8NCQ2 148 aa10.63□□□□□ -0.71
SF3B5-201ENST00000367569 X6R8D5 127 aa10.63□□□□□ -0.71
SF3B5-201ENST00000367569 M0R2Z0 102 aa10.62□□□□□ -0.71
SF3B5-201ENST00000367569 MPDU1O75352 247 aa10.62□□□□□ -0.71
SF3B5-201ENST00000367569 IGLC2P0DOY2 106 aa10.62□□□□□ -0.71
SF3B5-201ENST00000367569 NANOS2P60321 138 aaKnown RBP10.62□□□□□ -0.71
SF3B5-201ENST00000367569 SPINK13Q1W4C9 94 aa10.62□□□□□ -0.71
SF3B5-201ENST00000367569 SAMD13Q5VXD3 122 aa10.62□□□□□ -0.71
SF3B5-201ENST00000367569 LCN15Q6UWW0 184 aa10.62□□□□□ -0.71
SF3B5-201ENST00000367569 S100A7AQ86SG5 101 aa10.62□□□□□ -0.71
SF3B5-201ENST00000367569 Q8NAQ8 132 aa10.62□□□□□ -0.71
SF3B5-201ENST00000367569 LINC00476Q8WZB0 136 aa10.62□□□□□ -0.71
SF3B5-201ENST00000367569 SLC25A2Q9BXI2 301 aa10.62□□□□□ -0.71
SF3B5-201ENST00000367569 PARD6GQ9BYG4 376 aaPredicted RBP10.62□□□□□ -0.71
SF3B5-201ENST00000367569 ZNF586Q9NXT0 402 aa10.62□□□□□ -0.71
SF3B5-201ENST00000367569 FXYD6-FXYD2A0A087WZ82 144 aa10.61□□□□□ -0.71
SF3B5-201ENST00000367569 PRAC2D3DTV9 90 aa10.61□□□□□ -0.71
SF3B5-201ENST00000367569 SMLR1H3BR10 107 aa10.61□□□□□ -0.71
SF3B5-201ENST00000367569 GIPP09681 153 aaPredicted RBP10.61□□□□□ -0.71
SF3B5-201ENST00000367569 RBMY1A1P0DJD3 496 aaKnown RBP10.61□□□□□ -0.71
SF3B5-201ENST00000367569 RBMY1CP0DJD4 496 aa10.61□□□□□ -0.71
SF3B5-201ENST00000367569 PSG9Q00887 426 aa10.61□□□□□ -0.71
SF3B5-201ENST00000367569 RBMY1FQ15415 496 aaKnown RBP10.61□□□□□ -0.71
SF3B5-201ENST00000367569 PSG3Q16557 428 aa10.61□□□□□ -0.71
SF3B5-201ENST00000367569 FFAR4Q5NUL3 377 aa10.61□□□□□ -0.71
SF3B5-201ENST00000367569 BAP18Q8IXM2 172 aa10.61□□□□□ -0.71
SF3B5-201ENST00000367569 BLNKQ8WV28 456 aa10.61□□□□□ -0.71
SF3B5-201ENST00000367569 RPUSD4Q96CM3 377 aaKnown RBP10.61□□□□□ -0.71
SF3B5-201ENST00000367569 ZNF331Q9NQX6 463 aaPredicted RBP10.61□□□□□ -0.71
SF3B5-201ENST00000367569 TRAV12-2A0A075B6T6 113 aa10.6□□□□□ -0.71
SF3B5-201ENST00000367569 IFNA5P01569 189 aa10.6□□□□□ -0.71
SF3B5-201ENST00000367569 OR10J4P0C629 311 aa10.6□□□□□ -0.71
SF3B5-201ENST00000367569 NUTF2P61970 127 aaKnown RBP10.6□□□□□ -0.71
SF3B5-201ENST00000367569 AMTNQ6UX39 209 aa10.6□□□□□ -0.71
SF3B5-201ENST00000367569 ZNF767PQ75MW2 155 aa10.6□□□□□ -0.71
SF3B5-201ENST00000367569 CELA1Q9UNI1 258 aa10.6□□□□□ -0.71
SF3B5-201ENST00000367569 DNAH10Q8IVF4 4471 aa10.6□□□□□ -0.71
SF3B5-201ENST00000367569 ZNF705EA8MWA4 302 aaPredicted RBP10.59□□□□□ -0.71
SF3B5-201ENST00000367569 C17orf112F2Z3M2 114 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 LY6G6CO95867 125 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 EMP1P54849 157 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 RHOBP62745 196 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 HSD17B11Q8NBQ5 300 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 OR8A1Q8NGG7 326 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 OR2T35Q8NGX2 323 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 SCGB1C1Q8TD33 95 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 CHAC2Q8WUX2 184 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 SLC50A1Q9BRV3 221 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 C1QTNF4Q9BXJ3 329 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 C11orf68Q9H3H3 251 aaKnown RBP10.59□□□□□ -0.71
SF3B5-201ENST00000367569 KCNIP2Q9NS61 270 aa10.59□□□□□ -0.71
SF3B5-201ENST00000367569 G3V3Q6 166 aa10.58□□□□□ -0.72
SF3B5-201ENST00000367569 J3KRW8 73 aa10.58□□□□□ -0.72
SF3B5-201ENST00000367569 M0R3E3 92 aa10.58□□□□□ -0.72
SF3B5-201ENST00000367569 PRM2P04554 102 aa10.58□□□□□ -0.72
SF3B5-201ENST00000367569 CXCL2P19875 107 aa10.58□□□□□ -0.72
SF3B5-201ENST00000367569 RAB2AP61019 212 aa10.58□□□□□ -0.72
SF3B5-201ENST00000367569 TMEM41BQ5BJD5 291 aa10.58□□□□□ -0.72
SF3B5-201ENST00000367569 EXOC3-AS1Q8N2X6 119 aa10.58□□□□□ -0.72
SF3B5-201ENST00000367569 FAM167A-AS1Q96KT0 104 aa10.58□□□□□ -0.72
SF3B5-201ENST00000367569 HRH4Q9H3N8 390 aa10.58□□□□□ -0.72
SF3B5-201ENST00000367569 NUPR2A6NF83 97 aa10.57□□□□□ -0.72
SF3B5-201ENST00000367569 BOLA2-SMG1P6H3BVE0 249 aa10.57□□□□□ -0.72
SF3B5-201ENST00000367569 OR7C2O60412 319 aa10.57□□□□□ -0.72
SF3B5-201ENST00000367569 NDUFB4O95168 129 aa10.57□□□□□ -0.72
SF3B5-201ENST00000367569 CEMP1Q6PRD7 247 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms