RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 IGHV2-70DA0A0C4DH43 119 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 TNFRSF6BO95407 300 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 ZFAND6Q6FIF0 208 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 DKK1O94907 266 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 SNHG12Q9BXW3 62 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 J3QKU1 62 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 PRR31Q5SQ13 230 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 TRAV8-3A0A0A6YYJ7 113 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 Q8TCH9 128 aa18.67■□□□□ 0.58
NPAS3-201ENST00000346562 ARMS2P0C7Q2 107 aa18.67■□□□□ 0.58
NPAS3-201ENST00000346562 TMEM141Q96I45 108 aa18.67■□□□□ 0.58
NPAS3-201ENST00000346562 AZU1P20160 251 aa18.67■□□□□ 0.58
NPAS3-201ENST00000346562 RBMY1FQ15415 496 aaKnown RBP18.67■□□□□ 0.58
NPAS3-201ENST00000346562 TMEM126AQ9H061 195 aa18.67■□□□□ 0.58
NPAS3-201ENST00000346562 EDA2RQ9HAV5 297 aa18.67■□□□□ 0.58
NPAS3-201ENST00000346562 ESDP10768 282 aa18.67■□□□□ 0.58
NPAS3-201ENST00000346562 MAP1BP46821 2468 aaKnown RBP18.66■□□□□ 0.58
NPAS3-201ENST00000346562 NEGR1Q7Z3B1 354 aa18.66■□□□□ 0.58
NPAS3-201ENST00000346562 DNAJC13O75165 2243 aa18.66■□□□□ 0.58
NPAS3-201ENST00000346562 MST1LQ2TV78 715 aa18.66■□□□□ 0.58
NPAS3-201ENST00000346562 SMKR1H3BMG3 65 aa18.66■□□□□ 0.58
NPAS3-201ENST00000346562 CFHR3Q02985 330 aa18.66■□□□□ 0.58
NPAS3-201ENST00000346562 TRAV8-1A0A0A6YYK1 113 aa18.66■□□□□ 0.58
NPAS3-201ENST00000346562 CGB3P0DN86 165 aa18.66■□□□□ 0.58
NPAS3-201ENST00000346562 YPEL3P61236 119 aaPredicted RBP18.66■□□□□ 0.58
NPAS3-201ENST00000346562 AMN1Q8IY45 258 aa18.66■□□□□ 0.58
NPAS3-201ENST00000346562 GREB1LQ9C091 1923 aaPredicted RBP18.65■□□□□ 0.58
NPAS3-201ENST00000346562 I3L3M4 83 aa18.65■□□□□ 0.58
NPAS3-201ENST00000346562 C5orf63A6NC05 138 aa18.65■□□□□ 0.58
NPAS3-201ENST00000346562 PMVKQ15126 192 aa18.64■□□□□ 0.58
NPAS3-201ENST00000346562 PDCD11Q14690 1871 aaKnown RBP18.64■□□□□ 0.58
NPAS3-201ENST00000346562 A0A1W2PPI3 338 aa18.64■□□□□ 0.57
NPAS3-201ENST00000346562 SYS1-DBNDD2H3BUS1 97 aa18.64■□□□□ 0.57
NPAS3-201ENST00000346562 PRR30Q53SZ7 412 aaPredicted RBP18.64■□□□□ 0.57
NPAS3-201ENST00000346562 ZNF625Q96I27 306 aaPredicted RBP18.64■□□□□ 0.57
NPAS3-201ENST00000346562 HEATR5BQ9P2D3 2071 aa18.64■□□□□ 0.57
NPAS3-201ENST00000346562 SCN2AQ99250 2005 aa18.64■□□□□ 0.57
NPAS3-201ENST00000346562 hDV102S1A0JD36 115 aa18.64■□□□□ 0.57
NPAS3-201ENST00000346562 IGKV1-16P04430 117 aa18.64■□□□□ 0.57
NPAS3-201ENST00000346562 THAP8Q8NA92 274 aa18.64■□□□□ 0.57
NPAS3-201ENST00000346562 CHD5Q8TDI0 1954 aa18.64■□□□□ 0.57
NPAS3-201ENST00000346562 GAGE2AQ6NT46 116 aa18.64■□□□□ 0.57
NPAS3-201ENST00000346562 PFN1P07737 140 aaKnown RBP18.63■□□□□ 0.57
NPAS3-201ENST00000346562 CR1LQ2VPA4 569 aa18.63■□□□□ 0.57
NPAS3-201ENST00000346562 QRFPP83859 136 aa18.63■□□□□ 0.57
NPAS3-201ENST00000346562 SPINK13Q1W4C9 94 aa18.63■□□□□ 0.57
NPAS3-201ENST00000346562 ZNF114Q8NC26 417 aa18.62■□□□□ 0.57
NPAS3-201ENST00000346562 MYOFQ9NZM1 2061 aa18.62■□□□□ 0.57
NPAS3-201ENST00000346562 LOC105371267A0A1B0GV96 52 aa18.62■□□□□ 0.57
NPAS3-201ENST00000346562 CFHR2P36980 270 aa18.62■□□□□ 0.57
NPAS3-201ENST00000346562 MAPK1IP1LQ8NDC0 245 aa18.62■□□□□ 0.57
NPAS3-201ENST00000346562 ZNF492Q9P255 531 aa18.62■□□□□ 0.57
NPAS3-201ENST00000346562 C1orf194Q5T5A4 169 aa18.62■□□□□ 0.57
NPAS3-201ENST00000346562 KLK9Q9UKQ9 250 aa18.62■□□□□ 0.57
NPAS3-201ENST00000346562 H3BMM0 161 aa18.61■□□□□ 0.57
NPAS3-201ENST00000346562 OCIAD2Q56VL3 154 aa18.61■□□□□ 0.57
NPAS3-201ENST00000346562 TP53TG1Q9Y2A0 90 aa18.61■□□□□ 0.57
NPAS3-201ENST00000346562 IGHV1OR15-1A0A075B7D0 117 aa18.61■□□□□ 0.57
NPAS3-201ENST00000346562 KNCNA6PVL3 124 aa18.61■□□□□ 0.57
NPAS3-201ENST00000346562 ZC2HC1BQ5TFG8 222 aa18.61■□□□□ 0.57
NPAS3-201ENST00000346562 NDUFA4O00483 81 aa18.61■□□□□ 0.57
NPAS3-201ENST00000346562 ZMAT4Q9H898 229 aa18.6■□□□□ 0.57
NPAS3-201ENST00000346562 ZNF833PQ6ZTB9 187 aa18.6■□□□□ 0.57
NPAS3-201ENST00000346562 CHAC1Q9BUX1 264 aa18.6■□□□□ 0.57
NPAS3-201ENST00000346562 HS3ST6Q96QI5 342 aa18.6■□□□□ 0.57
NPAS3-201ENST00000346562 NYNRINQ9P2P1 1898 aaKnown RBP18.59■□□□□ 0.57
NPAS3-201ENST00000346562 LINC00205P59089 165 aa18.59■□□□□ 0.57
NPAS3-201ENST00000346562 C5orf24Q7Z6I8 188 aa18.59■□□□□ 0.57
NPAS3-201ENST00000346562 TMEM243Q9BU79 118 aa18.59■□□□□ 0.57
NPAS3-201ENST00000346562 IGHV3-16A0A0C4DH30 117 aa18.59■□□□□ 0.57
NPAS3-201ENST00000346562 PRSS46E5RG02 174 aa18.59■□□□□ 0.57
NPAS3-201ENST00000346562 IGFL3Q6UXB1 125 aa18.59■□□□□ 0.57
NPAS3-201ENST00000346562 C1orf122Q6ZSJ8 110 aa18.59■□□□□ 0.57
NPAS3-201ENST00000346562 GAGE12BA1L429 117 aa18.58■□□□□ 0.57
NPAS3-201ENST00000346562 GAGE7O76087 117 aa18.58■□□□□ 0.57
NPAS3-201ENST00000346562 GAGE12FP0CL80 117 aa18.58■□□□□ 0.57
NPAS3-201ENST00000346562 GAGE12GP0CL81 117 aa18.58■□□□□ 0.57
NPAS3-201ENST00000346562 GAGE12IP0CL82 117 aa18.58■□□□□ 0.57
NPAS3-201ENST00000346562 PAX9P55771 341 aa18.58■□□□□ 0.57
NPAS3-201ENST00000346562 COLCA2A8K830 154 aa18.58■□□□□ 0.57
NPAS3-201ENST00000346562 C3orf79P0CE67 100 aa18.58■□□□□ 0.57
NPAS3-201ENST00000346562 VWC2Q2TAL6 325 aa18.58■□□□□ 0.57
NPAS3-201ENST00000346562 C8orf49Q96NF6 230 aa18.58■□□□□ 0.56
NPAS3-201ENST00000346562 CGB7P0DN87 165 aa18.57■□□□□ 0.56
NPAS3-201ENST00000346562 MLANAQ16655 118 aa18.57■□□□□ 0.56
NPAS3-201ENST00000346562 A0A087X0K7 114 aa18.57■□□□□ 0.56
NPAS3-201ENST00000346562 NAA38Q9BRA0 125 aaKnown RBP18.57■□□□□ 0.56
NPAS3-201ENST00000346562 KLHDC3Q9BQ90 382 aa18.57■□□□□ 0.56
NPAS3-201ENST00000346562 TCTEX1D4Q5JR98 221 aa18.56■□□□□ 0.56
NPAS3-201ENST00000346562 NCOR1P1Q9H4R4 102 aa18.56■□□□□ 0.56
NPAS3-201ENST00000346562 NDUFA4L2Q9NRX3 87 aa18.56■□□□□ 0.56
NPAS3-201ENST00000346562 SOCS3O14543 225 aa18.56■□□□□ 0.56
NPAS3-201ENST00000346562 SUMO4Q6EEV6 95 aa18.56■□□□□ 0.56
NPAS3-201ENST00000346562 KIR3DS1Q14943 382 aa18.55■□□□□ 0.56
NPAS3-201ENST00000346562 Q8N8P6 123 aa18.55■□□□□ 0.56
NPAS3-201ENST00000346562 TMEM14BQ9NUH8 114 aa18.55■□□□□ 0.56
NPAS3-201ENST00000346562 CDKN1BP46527 198 aa18.55■□□□□ 0.56
NPAS3-201ENST00000346562 SIPA1L1O43166 1804 aa18.55■□□□□ 0.56
NPAS3-201ENST00000346562 C8orf86Q6ZUL3 223 aa18.55■□□□□ 0.56
NPAS3-201ENST00000346562 ZNF581Q9P0T4 197 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms