RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
USF2-202ENST00000343550 PLECQ15149 4684 aaKnown RBP13.13□□□□□ -0.31
USF2-202ENST00000343550 NUPR2A6NF83 97 aa13.13□□□□□ -0.31
USF2-202ENST00000343550 GCSAMLQ5JQS6 135 aa13.13□□□□□ -0.31
USF2-202ENST00000343550 F6UB75 175 aa13.12□□□□□ -0.31
USF2-202ENST00000343550 LY6G6CO95867 125 aa13.12□□□□□ -0.31
USF2-202ENST00000343550 IFNA5P01569 189 aa13.12□□□□□ -0.31
USF2-202ENST00000343550 SNRPCP09234 159 aaKnown RBP13.12□□□□□ -0.31
USF2-202ENST00000343550 C4BPBP20851 252 aa13.12□□□□□ -0.31
USF2-202ENST00000343550 TMEM41BQ5BJD5 291 aa13.12□□□□□ -0.31
USF2-202ENST00000343550 SPATA31B1PQ5VZV4 182 aa13.12□□□□□ -0.31
USF2-202ENST00000343550 CEMP1Q6PRD7 247 aaPredicted RBP13.12□□□□□ -0.31
USF2-202ENST00000343550 RNF182Q8N6D2 247 aa13.12□□□□□ -0.31
USF2-202ENST00000343550 LRRC20Q8TCA0 184 aa13.12□□□□□ -0.31
USF2-202ENST00000343550 SCGB1C1Q8TD33 95 aa13.12□□□□□ -0.31
USF2-202ENST00000343550 CLUHP3Q96NS8 147 aa13.12□□□□□ -0.31
USF2-202ENST00000343550 RARRES2Q99969 163 aa13.12□□□□□ -0.31
USF2-202ENST00000343550 A0A0J9YX75 114 aa13.11□□□□□ -0.31
USF2-202ENST00000343550 C17orf112F2Z3M2 114 aa13.11□□□□□ -0.31
USF2-202ENST00000343550 H3BQ15 152 aa13.11□□□□□ -0.31
USF2-202ENST00000343550 IGLC2P0DOY2 106 aa13.11□□□□□ -0.31
USF2-202ENST00000343550 NUTF2P61970 127 aaKnown RBP13.11□□□□□ -0.31
USF2-202ENST00000343550 EBLN2Q6P2I7 272 aa13.11□□□□□ -0.31
USF2-202ENST00000343550 CSNK1G2-AS1Q8NCQ2 148 aa13.11□□□□□ -0.31
USF2-202ENST00000343550 AQP10Q96PS8 301 aa13.11□□□□□ -0.31
USF2-202ENST00000343550 PARD6GQ9BYG4 376 aaPredicted RBP13.11□□□□□ -0.31
USF2-202ENST00000343550 HRH4Q9H3N8 390 aa13.11□□□□□ -0.31
USF2-202ENST00000343550 ALMS1Q8TCU4 4167 aa13.11□□□□□ -0.31
USF2-202ENST00000343550 IGKV3-20P01619 116 aa13.1□□□□□ -0.31
USF2-202ENST00000343550 FAM78BQ5VT40 261 aa13.1□□□□□ -0.31
USF2-202ENST00000343550 OR2T35Q8NGX2 323 aa13.1□□□□□ -0.31
USF2-202ENST00000343550 OR11H2Q8NH07 326 aa13.1□□□□□ -0.31
USF2-202ENST00000343550 ZNF331Q9NQX6 463 aaPredicted RBP13.1□□□□□ -0.31
USF2-202ENST00000343550 KCNIP2Q9NS61 270 aa13.1□□□□□ -0.31
USF2-202ENST00000343550 CXCL2P19875 107 aa13.09□□□□□ -0.31
USF2-202ENST00000343550 HLA-DMBP28068 263 aa13.09□□□□□ -0.31
USF2-202ENST00000343550 PSG3Q16557 428 aa13.09□□□□□ -0.31
USF2-202ENST00000343550 LCN15Q6UWW0 184 aa13.09□□□□□ -0.31
USF2-202ENST00000343550 OR4B1Q8NGF8 309 aa13.09□□□□□ -0.31
USF2-202ENST00000343550 SAT2Q96F10 170 aaPredicted RBP13.09□□□□□ -0.31
USF2-202ENST00000343550 H3BTX0 84 aa13.08□□□□□ -0.31
USF2-202ENST00000343550 ZNF586Q9NXT0 402 aa13.08□□□□□ -0.31
USF2-202ENST00000343550 CLEC5AQ9NY25 188 aa13.08□□□□□ -0.31
USF2-202ENST00000343550 TMEM14CQ9P0S9 112 aa13.08□□□□□ -0.31
USF2-202ENST00000343550 KLK5Q9Y337 293 aaPredicted RBP13.08□□□□□ -0.31
USF2-202ENST00000343550 G3V3Q6 166 aa13.08□□□□□ -0.32
USF2-202ENST00000343550 GUK1Q16774 197 aa13.08□□□□□ -0.32
USF2-202ENST00000343550 ZNF738Q8NE65 137 aa13.08□□□□□ -0.32
USF2-202ENST00000343550 SLC50A1Q9BRV3 221 aa13.08□□□□□ -0.32
USF2-202ENST00000343550 C1QTNF4Q9BXJ3 329 aa13.08□□□□□ -0.32
USF2-202ENST00000343550 XCL2Q9UBD3 114 aa13.08□□□□□ -0.32
USF2-202ENST00000343550 RFNGQ9Y644 331 aa13.08□□□□□ -0.32
USF2-202ENST00000343550 A8MTW9 85 aa13.07□□□□□ -0.32
USF2-202ENST00000343550 SLC17A3O00476 420 aa13.07□□□□□ -0.32
USF2-202ENST00000343550 ZNF705DP0CH99 300 aaPredicted RBP13.07□□□□□ -0.32
USF2-202ENST00000343550 ZNF705BP0CI00 300 aaPredicted RBP13.07□□□□□ -0.32
USF2-202ENST00000343550 PSG9Q00887 426 aa13.07□□□□□ -0.32
USF2-202ENST00000343550 FFAR4Q5NUL3 377 aa13.07□□□□□ -0.32
USF2-202ENST00000343550 MIR17HGQ75NE6 70 aa13.07□□□□□ -0.32
USF2-202ENST00000343550 INO80EQ8NBZ0 244 aaPredicted RBP13.07□□□□□ -0.32
USF2-202ENST00000343550 FAM167A-AS1Q96KT0 104 aa13.07□□□□□ -0.32
USF2-202ENST00000343550 SLC25A2Q9BXI2 301 aa13.07□□□□□ -0.32
USF2-202ENST00000343550 TNFSF18Q9UNG2 199 aa13.07□□□□□ -0.32
USF2-202ENST00000343550 FXYD7P58549 80 aa13.06□□□□□ -0.32
USF2-202ENST00000343550 SLC35B3Q9H1N7 401 aa13.06□□□□□ -0.32
USF2-202ENST00000343550 FXYD6-FXYD2A0A087WZ82 144 aa13.05□□□□□ -0.32
USF2-202ENST00000343550 RNF222A6NCQ9 220 aa13.05□□□□□ -0.32
USF2-202ENST00000343550 ZNF705EA8MWA4 302 aaPredicted RBP13.05□□□□□ -0.32
USF2-202ENST00000343550 DUSP14O95147 198 aaKnown RBP13.05□□□□□ -0.32
USF2-202ENST00000343550 PYYP10082 97 aa13.05□□□□□ -0.32
USF2-202ENST00000343550 HIST1H1EP10412 219 aaKnown RBP13.05□□□□□ -0.32
USF2-202ENST00000343550 CNN1P51911 297 aaKnown RBP13.05□□□□□ -0.32
USF2-202ENST00000343550 ZNF266Q14584 549 aa13.05□□□□□ -0.32
USF2-202ENST00000343550 AMTNQ6UX39 209 aa13.05□□□□□ -0.32
USF2-202ENST00000343550 MRPL32Q9BYC8 188 aaKnown RBP13.05□□□□□ -0.32
USF2-202ENST00000343550 FUT9Q9Y231 359 aa13.05□□□□□ -0.32
USF2-202ENST00000343550 TRBV19A0A075B6N1 114 aa13.04□□□□□ -0.32
USF2-202ENST00000343550 ZNF705FA8MVS1 300 aaPredicted RBP13.04□□□□□ -0.32
USF2-202ENST00000343550 OR8A1Q8NGG7 326 aa13.04□□□□□ -0.32
USF2-202ENST00000343550 PHLDA1Q8WV24 401 aaPredicted RBP13.04□□□□□ -0.32
USF2-202ENST00000343550 RPUSD4Q96CM3 377 aaKnown RBP13.04□□□□□ -0.32
USF2-202ENST00000343550 TIMM9Q9Y5J7 89 aa13.04□□□□□ -0.32
USF2-202ENST00000343550 ZNF253O75346 499 aa13.03□□□□□ -0.32
USF2-202ENST00000343550 PRB4P10163 310 aaPredicted RBP13.03□□□□□ -0.32
USF2-202ENST00000343550 MFFQ9GZY8 342 aa13.03□□□□□ -0.32
USF2-202ENST00000343550 OR51M1Q9H341 326 aa13.03□□□□□ -0.32
USF2-202ENST00000343550 X6R8D5 127 aa13.03□□□□□ -0.32
USF2-202ENST00000343550 NDUFB4O95168 129 aa13.03□□□□□ -0.32
USF2-202ENST00000343550 SMLR1H3BR10 107 aa13.02□□□□□ -0.33
USF2-202ENST00000343550 NBEAP1P0C6P0 100 aa13.02□□□□□ -0.33
USF2-202ENST00000343550 RHOBP62745 196 aa13.02□□□□□ -0.33
USF2-202ENST00000343550 HIST1H1AQ02539 215 aaPredicted RBP13.02□□□□□ -0.33
USF2-202ENST00000343550 PDE6HQ13956 83 aa13.02□□□□□ -0.33
USF2-202ENST00000343550 Q8NAQ8 132 aa13.02□□□□□ -0.33
USF2-202ENST00000343550 HSD17B11Q8NBQ5 300 aa13.02□□□□□ -0.33
USF2-202ENST00000343550 BLNKQ8WV28 456 aa13.02□□□□□ -0.33
USF2-202ENST00000343550 PRAC2D3DTV9 90 aa13.01□□□□□ -0.33
USF2-202ENST00000343550 DEFB4AO15263 64 aa13.01□□□□□ -0.33
USF2-202ENST00000343550 MIFP14174 115 aa13.01□□□□□ -0.33
USF2-202ENST00000343550 M6PRP20645 277 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms