RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 DKK1O94907 266 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 SMKR1H3BMG3 65 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 C5orf24Q7Z6I8 188 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 MAPK1IP1LQ8NDC0 245 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 CFHR3Q02985 330 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 GAGE12JA6NER3 117 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 GAGE1Q13065 139 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 GAGE4Q13068 117 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 GAGE5Q13069 117 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 Q6ZS49 121 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 HIST3H2BBQ8N257 126 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 ZNF48Q96MX3 618 aaPredicted RBP12.32□□□□□ -0.44
COL11A2-201ENST00000341947 EREGO14944 169 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 APOC4P55056 127 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 MCRIP2Q9BUT9 160 aaKnown RBP12.32□□□□□ -0.44
COL11A2-201ENST00000341947 TRBV25-1A0A075B6N4 114 aa12.31□□□□□ -0.44
COL11A2-201ENST00000341947 FOXL2NBQ6ZUU3 175 aa12.31□□□□□ -0.44
COL11A2-201ENST00000341947 ARMS2P0C7Q2 107 aa12.31□□□□□ -0.44
COL11A2-201ENST00000341947 LINC00205P59089 165 aa12.31□□□□□ -0.44
COL11A2-201ENST00000341947 SNRNP200O75643 2136 aaKnown RBP12.31□□□□□ -0.44
COL11A2-201ENST00000341947 ABCA7Q8IZY2 2146 aa12.31□□□□□ -0.44
COL11A2-201ENST00000341947 AMN1Q8IY45 258 aa12.31□□□□□ -0.44
COL11A2-201ENST00000341947 DOCK3Q8IZD9 2030 aa12.31□□□□□ -0.44
COL11A2-201ENST00000341947 GREB1LQ9C091 1923 aaPredicted RBP12.31□□□□□ -0.44
COL11A2-201ENST00000341947 IGKV1-16P04430 117 aa12.31□□□□□ -0.44
COL11A2-201ENST00000341947 GFRA4Q9GZZ7 299 aa12.31□□□□□ -0.44
COL11A2-201ENST00000341947 NDUFB8O95169 186 aa12.31□□□□□ -0.44
COL11A2-201ENST00000341947 ZNF625Q96I27 306 aaPredicted RBP12.31□□□□□ -0.44
COL11A2-201ENST00000341947 KLHDC3Q9BQ90 382 aa12.31□□□□□ -0.44
COL11A2-201ENST00000341947 TRAV8-3A0A0A6YYJ7 113 aa12.3□□□□□ -0.44
COL11A2-201ENST00000341947 IGHV2-70DA0A0C4DH43 119 aa12.3□□□□□ -0.44
COL11A2-201ENST00000341947 hDV102S1A0JD36 115 aa12.3□□□□□ -0.44
COL11A2-201ENST00000341947 J3QKU1 62 aa12.3□□□□□ -0.44
COL11A2-201ENST00000341947 TMEM75Q8N9X5 138 aa12.3□□□□□ -0.44
COL11A2-201ENST00000341947 A0A1W2PPI3 338 aa12.3□□□□□ -0.44
COL11A2-201ENST00000341947 NKAPP1Q8N9T2 125 aa12.3□□□□□ -0.44
COL11A2-201ENST00000341947 NYNRINQ9P2P1 1898 aaKnown RBP12.3□□□□□ -0.44
COL11A2-201ENST00000341947 GAGE2BQ13066 116 aa12.3□□□□□ -0.44
COL11A2-201ENST00000341947 KNCNA6PVL3 124 aa12.29□□□□□ -0.44
COL11A2-201ENST00000341947 DLX4Q92988 240 aaPredicted RBP12.29□□□□□ -0.44
COL11A2-201ENST00000341947 TNFRSF6BO95407 300 aa12.29□□□□□ -0.44
COL11A2-201ENST00000341947 AZU1P20160 251 aa12.29□□□□□ -0.44
COL11A2-201ENST00000341947 J3QLI3 93 aa12.29□□□□□ -0.44
COL11A2-201ENST00000341947 ESDP10768 282 aa12.29□□□□□ -0.44
COL11A2-201ENST00000341947 SPINK13Q1W4C9 94 aa12.29□□□□□ -0.44
COL11A2-201ENST00000341947 MST1LQ2TV78 715 aa12.29□□□□□ -0.44
COL11A2-201ENST00000341947 MRPL27Q9P0M9 148 aaKnown RBP12.29□□□□□ -0.44
COL11A2-201ENST00000341947 QRFPP83859 136 aa12.29□□□□□ -0.44
COL11A2-201ENST00000341947 MLANAQ16655 118 aa12.29□□□□□ -0.44
COL11A2-201ENST00000341947 CR1LQ2VPA4 569 aa12.29□□□□□ -0.44
COL11A2-201ENST00000341947 SNHG12Q9BXW3 62 aa12.29□□□□□ -0.44
COL11A2-201ENST00000341947 ZFAND6Q6FIF0 208 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 TMEM126AQ9H061 195 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 LOC105371267A0A1B0GV96 52 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 CGB3P0DN86 165 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 Q8TCH9 128 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 KLK9Q9UKQ9 250 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 SYS1-DBNDD2H3BUS1 97 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 RMI2Q96E14 147 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 NAA38Q9BRA0 125 aaKnown RBP12.28□□□□□ -0.44
COL11A2-201ENST00000341947 RALGAPA1Q6GYQ0 2036 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 HOXD3P31249 432 aaPredicted RBP12.28□□□□□ -0.44
COL11A2-201ENST00000341947 YPEL3P61236 119 aaPredicted RBP12.28□□□□□ -0.44
COL11A2-201ENST00000341947 RNF144BQ7Z419 303 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 EDA2RQ9HAV5 297 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 ZNF581Q9P0T4 197 aa12.28□□□□□ -0.44
COL11A2-201ENST00000341947 IGHV3-16A0A0C4DH30 117 aa12.27□□□□□ -0.44
COL11A2-201ENST00000341947 PMVKQ15126 192 aa12.27□□□□□ -0.44
COL11A2-201ENST00000341947 THADAQ6YHU6 1953 aa12.27□□□□□ -0.45
COL11A2-201ENST00000341947 OCIAD2Q56VL3 154 aa12.27□□□□□ -0.45
COL11A2-201ENST00000341947 ZC2HC1BQ5TFG8 222 aa12.27□□□□□ -0.45
COL11A2-201ENST00000341947 CFHR2P36980 270 aa12.27□□□□□ -0.45
COL11A2-201ENST00000341947 GAGE2AQ6NT46 116 aa12.27□□□□□ -0.45
COL11A2-201ENST00000341947 ZNF114Q8NC26 417 aa12.27□□□□□ -0.45
COL11A2-201ENST00000341947 I3L3M4 83 aa12.26□□□□□ -0.45
COL11A2-201ENST00000341947 PFN1P07737 140 aaKnown RBP12.26□□□□□ -0.45
COL11A2-201ENST00000341947 TMEM141Q96I45 108 aa12.26□□□□□ -0.45
COL11A2-201ENST00000341947 TP53TG1Q9Y2A0 90 aa12.26□□□□□ -0.45
COL11A2-201ENST00000341947 C1orf122Q6ZSJ8 110 aa12.26□□□□□ -0.45
COL11A2-201ENST00000341947 THAP8Q8NA92 274 aa12.26□□□□□ -0.45
COL11A2-201ENST00000341947 RBMY1FQ15415 496 aaKnown RBP12.26□□□□□ -0.45
COL11A2-201ENST00000341947 NEGR1Q7Z3B1 354 aa12.26□□□□□ -0.45
COL11A2-201ENST00000341947 ZNRD1Q9P1U0 126 aa12.26□□□□□ -0.45
COL11A2-201ENST00000341947 SIPA1L1O43166 1804 aa12.26□□□□□ -0.45
COL11A2-201ENST00000341947 A0A087X0K7 114 aa12.26□□□□□ -0.45
COL11A2-201ENST00000341947 COLCA2A8K830 154 aa12.26□□□□□ -0.45
COL11A2-201ENST00000341947 A0A0G2JRQ6 117 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 C3orf79P0CE67 100 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 IGHV1OR15-1A0A075B7D0 117 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 GAGE12BA1L429 117 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 GAGE7O76087 117 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 GAGE12FP0CL80 117 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 GAGE12GP0CL81 117 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 GAGE12IP0CL82 117 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 C8orf49Q96NF6 230 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 LCTP09848 1927 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 PAX9P55771 341 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 TET1Q8NFU7 2136 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 HS3ST6Q96QI5 342 aa12.25□□□□□ -0.45
COL11A2-201ENST00000341947 SPTA1P02549 2419 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms