RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 UHRF2Q96PU4 802 aa14.48□□□□□ -0.09
SYNE2-201ENST00000341472 VPS13DQ5THJ4 4388 aa14.48□□□□□ -0.09
SYNE2-201ENST00000341472 DEFB131BA0A096LNP1 70 aa14.47□□□□□ -0.09
SYNE2-201ENST00000341472 AGPAT2O15120 278 aa14.47□□□□□ -0.09
SYNE2-201ENST00000341472 CAV2P51636 162 aa14.47□□□□□ -0.09
SYNE2-201ENST00000341472 RAB32Q13637 225 aa14.47□□□□□ -0.09
SYNE2-201ENST00000341472 LRRC20Q8TCA0 184 aa14.47□□□□□ -0.09
SYNE2-201ENST00000341472 ARV1Q9H2C2 271 aa14.47□□□□□ -0.09
SYNE2-201ENST00000341472 A8MTW9 85 aa14.46□□□□□ -0.09
SYNE2-201ENST00000341472 CNN1P51911 297 aaKnown RBP14.46□□□□□ -0.09
SYNE2-201ENST00000341472 S100A10P60903 97 aa14.46□□□□□ -0.09
SYNE2-201ENST00000341472 RAB31Q13636 194 aa14.46□□□□□ -0.09
SYNE2-201ENST00000341472 C1orf158Q8N1D5 194 aa14.46□□□□□ -0.09
SYNE2-201ENST00000341472 RNF182Q8N6D2 247 aa14.46□□□□□ -0.09
SYNE2-201ENST00000341472 FAM24AA6NFZ4 105 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 CST7O76096 145 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 MPC2O95563 127 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 HBE1P02100 147 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 AMBPP02760 352 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 AMTNQ6UX39 209 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 ZNF738Q8NE65 137 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 OR2T35Q8NGX2 323 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 THAP6Q8TBB0 222 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 IGF2BP2-AS1Q96M15 143 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 RNF126Q9BV68 326 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 KMT2AQ03164 3969 aa14.45□□□□□ -0.1
SYNE2-201ENST00000341472 IGHV4-4A0A075B6R2 117 aa14.44□□□□□ -0.1
SYNE2-201ENST00000341472 A0A087X0K7 114 aa14.44□□□□□ -0.1
SYNE2-201ENST00000341472 LRRC37A5PQ49AS3 106 aa14.44□□□□□ -0.1
SYNE2-201ENST00000341472 LINC00305Q7Z4B0 112 aa14.44□□□□□ -0.1
SYNE2-201ENST00000341472 TCTE3Q8IZS6 198 aa14.44□□□□□ -0.1
SYNE2-201ENST00000341472 ST6GAL2Q96JF0 529 aa14.44□□□□□ -0.1
SYNE2-201ENST00000341472 MGST2Q99735 147 aa14.44□□□□□ -0.1
SYNE2-201ENST00000341472 TMEM208Q9BTX3 173 aa14.44□□□□□ -0.1
SYNE2-201ENST00000341472 C11orf1Q9H5F2 150 aa14.44□□□□□ -0.1
SYNE2-201ENST00000341472 E5RGE8 158 aa14.43□□□□□ -0.1
SYNE2-201ENST00000341472 COX7A2P2O60397 106 aa14.43□□□□□ -0.1
SYNE2-201ENST00000341472 CAMLGP49069 296 aa14.43□□□□□ -0.1
SYNE2-201ENST00000341472 PSG3Q16557 428 aa14.43□□□□□ -0.1
SYNE2-201ENST00000341472 RRN3P1Q2M238 152 aa14.43□□□□□ -0.1
SYNE2-201ENST00000341472 PRR20EP86478 221 aa14.42□□□□□ -0.1
SYNE2-201ENST00000341472 PRR20CP86479 221 aa14.42□□□□□ -0.1
SYNE2-201ENST00000341472 PRR20DP86480 221 aa14.42□□□□□ -0.1
SYNE2-201ENST00000341472 PRR20BP86481 221 aa14.42□□□□□ -0.1
SYNE2-201ENST00000341472 PRR20AP86496 221 aa14.42□□□□□ -0.1
SYNE2-201ENST00000341472 Q6ZRG5 221 aa14.42□□□□□ -0.1
SYNE2-201ENST00000341472 OR8A1Q8NGG7 326 aa14.42□□□□□ -0.1
SYNE2-201ENST00000341472 TMEM37Q8WXS4 190 aa14.42□□□□□ -0.1
SYNE2-201ENST00000341472 DNAJC4Q9NNZ3 241 aa14.42□□□□□ -0.1
SYNE2-201ENST00000341472 UQCC1Q9NVA1 299 aa14.42□□□□□ -0.1
SYNE2-201ENST00000341472 DKK2Q9UBU2 259 aa14.42□□□□□ -0.1
SYNE2-201ENST00000341472 DNAH10Q8IVF4 4471 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 TEX48A0A1B0GUV7 120 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 LOC102723971A0A1B0GUV8 181 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 MRPS12O15235 138 aaKnown RBP14.41□□□□□ -0.1
SYNE2-201ENST00000341472 PFDN1O60925 122 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 S100A11P31949 105 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 RHOBP62745 196 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 SPINK13Q1W4C9 94 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 FAM222AQ5U5X8 452 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 C10orf113Q5VZT2 155 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 BPIFA4PQ86YQ2 179 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 PPP1R14DQ9NXH3 145 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 WDR83OSQ9Y284 106 aa14.41□□□□□ -0.1
SYNE2-201ENST00000341472 H0YIZ8 118 aa14.4□□□□□ -0.1
SYNE2-201ENST00000341472 M0R2Z0 102 aa14.4□□□□□ -0.1
SYNE2-201ENST00000341472 SULT1A1P50225 295 aa14.4□□□□□ -0.1
SYNE2-201ENST00000341472 HIST1H1AQ02539 215 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-201ENST00000341472 TMEM252Q8N6L7 170 aa14.4□□□□□ -0.1
SYNE2-201ENST00000341472 NIPSNAP3BQ9BS92 247 aa14.4□□□□□ -0.1
SYNE2-201ENST00000341472 LYRM2Q9NU23 88 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-201ENST00000341472 PLA2G2EQ9NZK7 142 aa14.4□□□□□ -0.1
SYNE2-201ENST00000341472 INSP01308 110 aa14.39□□□□□ -0.11
SYNE2-201ENST00000341472 SNRPCP09234 159 aaKnown RBP14.39□□□□□ -0.11
SYNE2-201ENST00000341472 CXCL2P19875 107 aa14.39□□□□□ -0.11
SYNE2-201ENST00000341472 B2MP61769 119 aa14.39□□□□□ -0.11
SYNE2-201ENST00000341472 MIC13Q5XKP0 118 aa14.39□□□□□ -0.11
SYNE2-201ENST00000341472 LCN15Q6UWW0 184 aa14.39□□□□□ -0.11
SYNE2-201ENST00000341472 STX12Q86Y82 276 aa14.39□□□□□ -0.11
SYNE2-201ENST00000341472 RPUSD4Q96CM3 377 aaKnown RBP14.39□□□□□ -0.11
SYNE2-201ENST00000341472 NDUFAF3Q9BU61 184 aa14.39□□□□□ -0.11
SYNE2-201ENST00000341472 SLC25A31Q9H0C2 315 aa14.39□□□□□ -0.11
SYNE2-201ENST00000341472 OR5AC2Q9NZP5 309 aa14.39□□□□□ -0.11
SYNE2-201ENST00000341472 MBD2Q9UBB5 411 aa14.39□□□□□ -0.11
SYNE2-201ENST00000341472 YTHDF2Q9Y5A9 579 aaKnown RBP14.39□□□□□ -0.11
SYNE2-201ENST00000341472 IGSF23A1L1A6 192 aa14.38□□□□□ -0.11
SYNE2-201ENST00000341472 CRXO43186 299 aaPredicted RBP14.38□□□□□ -0.11
SYNE2-201ENST00000341472 HBG1P69891 147 aa14.38□□□□□ -0.11
SYNE2-201ENST00000341472 HBG2P69892 147 aa14.38□□□□□ -0.11
SYNE2-201ENST00000341472 OPCMLQ14982 345 aa14.38□□□□□ -0.11
SYNE2-201ENST00000341472 ATP6V1FQ16864 119 aa14.38□□□□□ -0.11
SYNE2-201ENST00000341472 VWC2Q2TAL6 325 aa14.38□□□□□ -0.11
SYNE2-201ENST00000341472 Q5BKY6 102 aa14.38□□□□□ -0.11
SYNE2-201ENST00000341472 OR1L4Q8NGR5 311 aa14.38□□□□□ -0.11
SYNE2-201ENST00000341472 SLC50A1Q9BRV3 221 aa14.38□□□□□ -0.11
SYNE2-201ENST00000341472 ZNF331Q9NQX6 463 aaPredicted RBP14.38□□□□□ -0.11
SYNE2-201ENST00000341472 ZNF705GA8MUZ8 300 aaPredicted RBP14.37□□□□□ -0.11
SYNE2-201ENST00000341472 BOLA2-SMG1P6H3BVE0 249 aa14.37□□□□□ -0.11
SYNE2-201ENST00000341472 RPL29P47914 159 aaKnown RBP14.37□□□□□ -0.11
SYNE2-201ENST00000341472 MORN5Q5VZ52 161 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms