RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 RAB32Q13637 225 aa12.12□□□□□ -0.47
BRCC3-202ENST00000340647 FAM222AQ5U5X8 452 aa12.12□□□□□ -0.47
BRCC3-202ENST00000340647 LINC00305Q7Z4B0 112 aa12.12□□□□□ -0.47
BRCC3-202ENST00000340647 FAM240BA0A1B0GVZ2 78 aa12.11□□□□□ -0.47
BRCC3-202ENST00000340647 PLAC8L1A1L4L8 177 aa12.11□□□□□ -0.47
BRCC3-202ENST00000340647 C5orf51A6NDU8 294 aa12.11□□□□□ -0.47
BRCC3-202ENST00000340647 SPART-AS1P0CW21 52 aa12.11□□□□□ -0.47
BRCC3-202ENST00000340647 OPCMLQ14982 345 aa12.11□□□□□ -0.47
BRCC3-202ENST00000340647 PSG3Q16557 428 aa12.11□□□□□ -0.47
BRCC3-202ENST00000340647 MIC13Q5XKP0 118 aa12.11□□□□□ -0.47
BRCC3-202ENST00000340647 ZNF546Q86UE3 836 aa12.11□□□□□ -0.47
BRCC3-202ENST00000340647 BAP18Q8IXM2 172 aa12.11□□□□□ -0.47
BRCC3-202ENST00000340647 WDR83OSQ9Y284 106 aa12.11□□□□□ -0.47
BRCC3-202ENST00000340647 TRAV12-2A0A075B6T6 113 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 TRAV5A0A0B4J249 113 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 PRAC2D3DTV9 90 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 H3BQ15 152 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 SLC17A3O00476 420 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 GOSR2O14653 212 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 IGLC2P0DOY2 106 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 ZNF846Q147U1 533 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 PXDC1Q5TGL8 231 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 NRARPQ7Z6K4 114 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 TMEM252Q8N6L7 170 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 OR8A1Q8NGG7 326 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 SAT2Q96F10 170 aaPredicted RBP12.1□□□□□ -0.47
BRCC3-202ENST00000340647 ZNF331Q9NQX6 463 aaPredicted RBP12.1□□□□□ -0.47
BRCC3-202ENST00000340647 LYRM2Q9NU23 88 aaPredicted RBP12.1□□□□□ -0.47
BRCC3-202ENST00000340647 GOLT1BQ9Y3E0 138 aa12.1□□□□□ -0.47
BRCC3-202ENST00000340647 YTHDF2Q9Y5A9 579 aaKnown RBP12.1□□□□□ -0.47
BRCC3-202ENST00000340647 LOC102723971A0A1B0GUV8 181 aa12.09□□□□□ -0.47
BRCC3-202ENST00000340647 TMEM189A5PLL7 270 aa12.09□□□□□ -0.47
BRCC3-202ENST00000340647 ZNF705GA8MUZ8 300 aaPredicted RBP12.09□□□□□ -0.47
BRCC3-202ENST00000340647 H3BTX0 84 aa12.09□□□□□ -0.47
BRCC3-202ENST00000340647 L7N2F9 121 aa12.09□□□□□ -0.47
BRCC3-202ENST00000340647 DUSP14O95147 198 aaKnown RBP12.09□□□□□ -0.47
BRCC3-202ENST00000340647 AZU1P20160 251 aa12.09□□□□□ -0.47
BRCC3-202ENST00000340647 CAV2P51636 162 aa12.09□□□□□ -0.47
BRCC3-202ENST00000340647 VAMP2P63027 116 aa12.09□□□□□ -0.47
BRCC3-202ENST00000340647 KIR3DS1Q14943 382 aa12.09□□□□□ -0.47
BRCC3-202ENST00000340647 ZNF738Q8NE65 137 aa12.09□□□□□ -0.47
BRCC3-202ENST00000340647 UPK1BO75841 260 aa12.08□□□□□ -0.48
BRCC3-202ENST00000340647 SIX6O95475 246 aa12.08□□□□□ -0.48
BRCC3-202ENST00000340647 HBE1P02100 147 aa12.08□□□□□ -0.48
BRCC3-202ENST00000340647 S100A7P31151 101 aa12.08□□□□□ -0.48
BRCC3-202ENST00000340647 CAMLGP49069 296 aa12.08□□□□□ -0.48
BRCC3-202ENST00000340647 BCAP31P51572 246 aa12.08□□□□□ -0.48
BRCC3-202ENST00000340647 S100ZQ8WXG8 99 aa12.08□□□□□ -0.48
BRCC3-202ENST00000340647 NIPSNAP3BQ9BS92 247 aa12.08□□□□□ -0.48
BRCC3-202ENST00000340647 H0YIZ8 118 aa12.07□□□□□ -0.48
BRCC3-202ENST00000340647 SULT1A1P50225 295 aa12.07□□□□□ -0.48
BRCC3-202ENST00000340647 HIST1H1AQ02539 215 aaPredicted RBP12.07□□□□□ -0.48
BRCC3-202ENST00000340647 OXA1LQ15070 435 aa12.07□□□□□ -0.48
BRCC3-202ENST00000340647 RRN3P1Q2M238 152 aa12.07□□□□□ -0.48
BRCC3-202ENST00000340647 RPUSD4Q96CM3 377 aaKnown RBP12.07□□□□□ -0.48
BRCC3-202ENST00000340647 DNAJC4Q9NNZ3 241 aa12.07□□□□□ -0.48
BRCC3-202ENST00000340647 UQCC1Q9NVA1 299 aa12.07□□□□□ -0.48
BRCC3-202ENST00000340647 PKD1P98161 4303 aa12.07□□□□□ -0.48
BRCC3-202ENST00000340647 BOLA2-SMG1P6H3BVE0 249 aa12.06□□□□□ -0.48
BRCC3-202ENST00000340647 COX7A2P2O60397 106 aa12.06□□□□□ -0.48
BRCC3-202ENST00000340647 CXCL2P19875 107 aa12.06□□□□□ -0.48
BRCC3-202ENST00000340647 S100A10P60903 97 aa12.06□□□□□ -0.48
BRCC3-202ENST00000340647 C10orf113Q5VZT2 155 aa12.06□□□□□ -0.48
BRCC3-202ENST00000340647 MZT2BQ6NZ67 158 aa12.06□□□□□ -0.48
BRCC3-202ENST00000340647 CHAC2Q8WUX2 184 aa12.06□□□□□ -0.48
BRCC3-202ENST00000340647 PARD6GQ9BYG4 376 aaPredicted RBP12.06□□□□□ -0.48
BRCC3-202ENST00000340647 UBE2L5PA0A1B0GUS4 154 aa12.05□□□□□ -0.48
BRCC3-202ENST00000340647 INSP01308 110 aa12.05□□□□□ -0.48
BRCC3-202ENST00000340647 RPL29P47914 159 aaKnown RBP12.05□□□□□ -0.48
BRCC3-202ENST00000340647 NHLH2Q02577 135 aa12.05□□□□□ -0.48
BRCC3-202ENST00000340647 FCN2Q15485 313 aa12.05□□□□□ -0.48
BRCC3-202ENST00000340647 LCN15Q6UWW0 184 aa12.05□□□□□ -0.48
BRCC3-202ENST00000340647 BPIFA4PQ86YQ2 179 aa12.05□□□□□ -0.48
BRCC3-202ENST00000340647 SLC39A9Q9NUM3 307 aa12.05□□□□□ -0.48
BRCC3-202ENST00000340647 ZNF586Q9NXT0 402 aa12.05□□□□□ -0.48
BRCC3-202ENST00000340647 OR5AC2Q9NZP5 309 aa12.05□□□□□ -0.48
BRCC3-202ENST00000340647 S100A11P31949 105 aa12.04□□□□□ -0.48
BRCC3-202ENST00000340647 GCSAMLQ5JQS6 135 aa12.04□□□□□ -0.48
BRCC3-202ENST00000340647 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
BRCC3-202ENST00000340647 PKHD1P08F94 4074 aa12.04□□□□□ -0.48
BRCC3-202ENST00000340647 TSPOP30536 169 aa12.03□□□□□ -0.48
BRCC3-202ENST00000340647 POM121L12Q8N7R1 296 aa12.03□□□□□ -0.48
BRCC3-202ENST00000340647 SLC50A1Q9BRV3 221 aa12.03□□□□□ -0.48
BRCC3-202ENST00000340647 PTTG2Q9NZH5 202 aa12.03□□□□□ -0.48
BRCC3-202ENST00000340647 NDUFB4O95168 129 aa12.02□□□□□ -0.49
BRCC3-202ENST00000340647 PVALBP20472 110 aaPredicted RBP12.02□□□□□ -0.49
BRCC3-202ENST00000340647 H2BFSP57053 126 aa12.02□□□□□ -0.49
BRCC3-202ENST00000340647 B2MP61769 119 aa12.02□□□□□ -0.49
BRCC3-202ENST00000340647 RHOBP62745 196 aa12.02□□□□□ -0.49
BRCC3-202ENST00000340647 LRRC20Q8TCA0 184 aa12.02□□□□□ -0.49
BRCC3-202ENST00000340647 MARVELD1Q9BSK0 173 aa12.02□□□□□ -0.49
BRCC3-202ENST00000340647 TMEM208Q9BTX3 173 aa12.02□□□□□ -0.49
BRCC3-202ENST00000340647 PXMP4Q9Y6I8 212 aa12.02□□□□□ -0.49
BRCC3-202ENST00000340647 DYNC1H1Q14204 4646 aaKnown RBP12.01□□□□□ -0.49
BRCC3-202ENST00000340647 TEX48A0A1B0GUV7 120 aa12.01□□□□□ -0.49
BRCC3-202ENST00000340647 CT45A10P0DMU9 189 aa12.01□□□□□ -0.49
BRCC3-202ENST00000340647 FGF7P21781 194 aa12.01□□□□□ -0.49
BRCC3-202ENST00000340647 BAXQ07812 192 aa12.01□□□□□ -0.49
BRCC3-202ENST00000340647 TMEM88Q6PEY1 159 aa12.01□□□□□ -0.49
BRCC3-202ENST00000340647 Q6ZRG5 221 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms