RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ZNF738Q8NE65 137 aa10.55□□□□□ -0.72
ERCC1-203ENST00000340192 LRRC20Q8TCA0 184 aa10.55□□□□□ -0.72
ERCC1-203ENST00000340192 HRH4Q9H3N8 390 aa10.55□□□□□ -0.72
ERCC1-203ENST00000340192 DNAJC4Q9NNZ3 241 aa10.55□□□□□ -0.72
ERCC1-203ENST00000340192 IGHV3OR16-12A0A075B7B8 117 aa10.54□□□□□ -0.72
ERCC1-203ENST00000340192 A8MTW9 85 aa10.54□□□□□ -0.72
ERCC1-203ENST00000340192 ZNF705FA8MVS1 300 aaPredicted RBP10.54□□□□□ -0.72
ERCC1-203ENST00000340192 SNRPCP09234 159 aaKnown RBP10.54□□□□□ -0.72
ERCC1-203ENST00000340192 ZNF705DP0CH99 300 aaPredicted RBP10.54□□□□□ -0.72
ERCC1-203ENST00000340192 ZNF705BP0CI00 300 aaPredicted RBP10.54□□□□□ -0.72
ERCC1-203ENST00000340192 CXCL3P19876 107 aa10.54□□□□□ -0.72
ERCC1-203ENST00000340192 HLA-DMBP28068 263 aa10.54□□□□□ -0.72
ERCC1-203ENST00000340192 RPL29P47914 159 aaKnown RBP10.54□□□□□ -0.72
ERCC1-203ENST00000340192 B2MP61769 119 aa10.54□□□□□ -0.72
ERCC1-203ENST00000340192 OPCMLQ14982 345 aa10.54□□□□□ -0.72
ERCC1-203ENST00000340192 BPIFA4PQ86YQ2 179 aa10.54□□□□□ -0.72
ERCC1-203ENST00000340192 CHAC2Q8WUX2 184 aa10.54□□□□□ -0.72
ERCC1-203ENST00000340192 SLC25A31Q9H0C2 315 aa10.54□□□□□ -0.72
ERCC1-203ENST00000340192 DUSP14O95147 198 aaKnown RBP10.53□□□□□ -0.72
ERCC1-203ENST00000340192 CNN1P51911 297 aaKnown RBP10.53□□□□□ -0.72
ERCC1-203ENST00000340192 PSG3Q16557 428 aa10.53□□□□□ -0.72
ERCC1-203ENST00000340192 AMTNQ6UX39 209 aa10.53□□□□□ -0.72
ERCC1-203ENST00000340192 OR5C1Q8NGR4 320 aa10.53□□□□□ -0.72
ERCC1-203ENST00000340192 OR1L4Q8NGR5 311 aa10.53□□□□□ -0.72
ERCC1-203ENST00000340192 PPP1R1CQ8WVI7 109 aa10.53□□□□□ -0.72
ERCC1-203ENST00000340192 PFDN5Q99471 154 aa10.53□□□□□ -0.72
ERCC1-203ENST00000340192 NEU1Q99519 415 aa10.53□□□□□ -0.72
ERCC1-203ENST00000340192 SLC39A9Q9NUM3 307 aa10.53□□□□□ -0.72
ERCC1-203ENST00000340192 PXMP4Q9Y6I8 212 aa10.53□□□□□ -0.72
ERCC1-203ENST00000340192 TRAV5A0A0B4J249 113 aa10.52□□□□□ -0.73
ERCC1-203ENST00000340192 MPDU1O75352 247 aa10.52□□□□□ -0.73
ERCC1-203ENST00000340192 CXCL2P19875 107 aa10.52□□□□□ -0.73
ERCC1-203ENST00000340192 LCN15Q6UWW0 184 aa10.52□□□□□ -0.73
ERCC1-203ENST00000340192 OR11H7Q8NGC8 314 aa10.52□□□□□ -0.73
ERCC1-203ENST00000340192 THAP6Q8TBB0 222 aa10.52□□□□□ -0.73
ERCC1-203ENST00000340192 LINC00476Q8WZB0 136 aa10.52□□□□□ -0.73
ERCC1-203ENST00000340192 RNF126Q9BV68 326 aa10.52□□□□□ -0.73
ERCC1-203ENST00000340192 NPCDR1Q9BY65 106 aa10.52□□□□□ -0.73
ERCC1-203ENST00000340192 ZNF331Q9NQX6 463 aaPredicted RBP10.52□□□□□ -0.73
ERCC1-203ENST00000340192 CELA1Q9UNI1 258 aa10.52□□□□□ -0.73
ERCC1-203ENST00000340192 SMIM9A6NGZ8 99 aa10.51□□□□□ -0.73
ERCC1-203ENST00000340192 H3BTX0 84 aa10.51□□□□□ -0.73
ERCC1-203ENST00000340192 M0R2Z0 102 aa10.51□□□□□ -0.73
ERCC1-203ENST00000340192 SLC17A3O00476 420 aa10.51□□□□□ -0.73
ERCC1-203ENST00000340192 IGLC2P0DOY2 106 aa10.51□□□□□ -0.73
ERCC1-203ENST00000340192 PRB4P10163 310 aaPredicted RBP10.51□□□□□ -0.73
ERCC1-203ENST00000340192 CLINT1Q14677 625 aa10.51□□□□□ -0.73
ERCC1-203ENST00000340192 SPINK13Q1W4C9 94 aa10.51□□□□□ -0.73
ERCC1-203ENST00000340192 C1orf158Q8N1D5 194 aa10.51□□□□□ -0.73
ERCC1-203ENST00000340192 SLC50A1Q9BRV3 221 aa10.51□□□□□ -0.73
ERCC1-203ENST00000340192 GOLT1BQ9Y3E0 138 aa10.51□□□□□ -0.73
ERCC1-203ENST00000340192 C11orf94C9JXX5 98 aa10.5□□□□□ -0.73
ERCC1-203ENST00000340192 H3BQ15 152 aa10.5□□□□□ -0.73
ERCC1-203ENST00000340192 MPC2O95563 127 aa10.5□□□□□ -0.73
ERCC1-203ENST00000340192 LY6G6CO95867 125 aa10.5□□□□□ -0.73
ERCC1-203ENST00000340192 PET100P0DJ07 73 aa10.5□□□□□ -0.73
ERCC1-203ENST00000340192 HIST1H1AQ02539 215 aaPredicted RBP10.5□□□□□ -0.73
ERCC1-203ENST00000340192 Q6ZTC4 211 aa10.5□□□□□ -0.73
ERCC1-203ENST00000340192 OR8A1Q8NGG7 326 aa10.5□□□□□ -0.73
ERCC1-203ENST00000340192 C2CD4CQ8TF44 421 aa10.5□□□□□ -0.73
ERCC1-203ENST00000340192 RPUSD4Q96CM3 377 aaKnown RBP10.5□□□□□ -0.73
ERCC1-203ENST00000340192 IGF2BP2-AS1Q96M15 143 aa10.5□□□□□ -0.73
ERCC1-203ENST00000340192 ALG5Q9Y673 324 aa10.5□□□□□ -0.73
ERCC1-203ENST00000340192 PTTG1O95997 202 aa10.49□□□□□ -0.73
ERCC1-203ENST00000340192 AMBPP02760 352 aa10.49□□□□□ -0.73
ERCC1-203ENST00000340192 EMP1P54849 157 aa10.49□□□□□ -0.73
ERCC1-203ENST00000340192 GCSAMLQ5JQS6 135 aa10.49□□□□□ -0.73
ERCC1-203ENST00000340192 ZNF767PQ75MW2 155 aa10.49□□□□□ -0.73
ERCC1-203ENST00000340192 SAT2Q96F10 170 aaPredicted RBP10.49□□□□□ -0.73
ERCC1-203ENST00000340192 RFNGQ9Y644 331 aa10.49□□□□□ -0.73
ERCC1-203ENST00000340192 TMEM189A5PLL7 270 aa10.48□□□□□ -0.73
ERCC1-203ENST00000340192 BOLA2-SMG1P6H3BVE0 249 aa10.48□□□□□ -0.73
ERCC1-203ENST00000340192 CRXO43186 299 aaPredicted RBP10.48□□□□□ -0.73
ERCC1-203ENST00000340192 INSP01308 110 aa10.48□□□□□ -0.73
ERCC1-203ENST00000340192 RHOBP62745 196 aa10.48□□□□□ -0.73
ERCC1-203ENST00000340192 GUK1Q16774 197 aa10.48□□□□□ -0.73
ERCC1-203ENST00000340192 C12orf74Q32Q52 190 aa10.48□□□□□ -0.73
ERCC1-203ENST00000340192 BAP18Q8IXM2 172 aa10.48□□□□□ -0.73
ERCC1-203ENST00000340192 TMEM208Q9BTX3 173 aa10.48□□□□□ -0.73
ERCC1-203ENST00000340192 WDR61Q9GZS3 305 aaKnown RBP10.48□□□□□ -0.73
ERCC1-203ENST00000340192 ZNF586Q9NXT0 402 aa10.48□□□□□ -0.73
ERCC1-203ENST00000340192 MBD2Q9UBB5 411 aa10.48□□□□□ -0.73
ERCC1-203ENST00000340192 TRAV12-2A0A075B6T6 113 aa10.47□□□□□ -0.73
ERCC1-203ENST00000340192 TRAV10A0A0B4J240 114 aa10.47□□□□□ -0.73
ERCC1-203ENST00000340192 HBE1P02100 147 aa10.47□□□□□ -0.73
ERCC1-203ENST00000340192 ATP5SQ99766 215 aa10.47□□□□□ -0.73
ERCC1-203ENST00000340192 PPP1R14DQ9NXH3 145 aa10.47□□□□□ -0.73
ERCC1-203ENST00000340192 HSPB11Q9Y547 144 aa10.47□□□□□ -0.73
ERCC1-203ENST00000340192 LOC102723971A0A1B0GUV8 181 aa10.46□□□□□ -0.73
ERCC1-203ENST00000340192 IGLL5B9A064 214 aa10.46□□□□□ -0.73
ERCC1-203ENST00000340192 PRAC2D3DTV9 90 aa10.46□□□□□ -0.73
ERCC1-203ENST00000340192 SPART-AS1P0CW21 52 aa10.46□□□□□ -0.73
ERCC1-203ENST00000340192 RPL12P30050 165 aaKnown RBP10.46□□□□□ -0.73
ERCC1-203ENST00000340192 RRN3P1Q2M238 152 aa10.46□□□□□ -0.73
ERCC1-203ENST00000340192 KCNIP2Q9NS61 270 aa10.46□□□□□ -0.73
ERCC1-203ENST00000340192 TMEM14CQ9P0S9 112 aa10.46□□□□□ -0.73
ERCC1-203ENST00000340192 TRBV19A0A075B6N1 114 aa10.45□□□□□ -0.74
ERCC1-203ENST00000340192 C17orf112F2Z3M2 114 aa10.45□□□□□ -0.74
ERCC1-203ENST00000340192 ZNF253O75346 499 aa10.45□□□□□ -0.74
ERCC1-203ENST00000340192 PYYP10082 97 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms