RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 HRH4Q9H3N8 390 aa11.16□□□□□ -0.62
UBE3B-201ENST00000340074 TNFSF18Q9UNG2 199 aa11.16□□□□□ -0.62
UBE3B-201ENST00000340074 H3BQ15 152 aa11.15□□□□□ -0.62
UBE3B-201ENST00000340074 SMLR1H3BR10 107 aa11.15□□□□□ -0.62
UBE3B-201ENST00000340074 IGKV3-20P01619 116 aa11.15□□□□□ -0.62
UBE3B-201ENST00000340074 ZNF266Q14584 549 aa11.15□□□□□ -0.62
UBE3B-201ENST00000340074 LCN15Q6UWW0 184 aa11.15□□□□□ -0.62
UBE3B-201ENST00000340074 MIR17HGQ75NE6 70 aa11.15□□□□□ -0.62
UBE3B-201ENST00000340074 A0A0J9YX75 114 aa11.14□□□□□ -0.63
UBE3B-201ENST00000340074 SLC17A3O00476 420 aa11.14□□□□□ -0.63
UBE3B-201ENST00000340074 CXCL2P19875 107 aa11.14□□□□□ -0.63
UBE3B-201ENST00000340074 EBLN2Q6P2I7 272 aa11.14□□□□□ -0.63
UBE3B-201ENST00000340074 ZNF738Q8NE65 137 aa11.14□□□□□ -0.63
UBE3B-201ENST00000340074 OR4B1Q8NGF8 309 aa11.14□□□□□ -0.63
UBE3B-201ENST00000340074 SLC25A2Q9BXI2 301 aa11.14□□□□□ -0.63
UBE3B-201ENST00000340074 ZNF331Q9NQX6 463 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-201ENST00000340074 NUTF2P61970 127 aaKnown RBP11.13□□□□□ -0.63
UBE3B-201ENST00000340074 SAT2Q96F10 170 aaPredicted RBP11.13□□□□□ -0.63
UBE3B-201ENST00000340074 SLC50A1Q9BRV3 221 aa11.13□□□□□ -0.63
UBE3B-201ENST00000340074 MRPL32Q9BYC8 188 aaKnown RBP11.13□□□□□ -0.63
UBE3B-201ENST00000340074 ZNF586Q9NXT0 402 aa11.13□□□□□ -0.63
UBE3B-201ENST00000340074 CLEC5AQ9NY25 188 aa11.13□□□□□ -0.63
UBE3B-201ENST00000340074 TMEM14CQ9P0S9 112 aa11.13□□□□□ -0.63
UBE3B-201ENST00000340074 DNAH7Q8WXX0 4024 aa11.13□□□□□ -0.63
UBE3B-201ENST00000340074 ARPC5O15511 151 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 ZNF705DP0CH99 300 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-201ENST00000340074 ZNF705BP0CI00 300 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-201ENST00000340074 PYYP10082 97 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-201ENST00000340074 FXYD7P58549 80 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 PSG3Q16557 428 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 GUK1Q16774 197 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 TMEM41BQ5BJD5 291 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 HSD17B11Q8NBQ5 300 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 OR11H2Q8NH07 326 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 FAM167A-AS1Q96KT0 104 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 CLUHP3Q96NS8 147 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 RARRES2Q99969 163 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 FUT9Q9Y231 359 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 TIMM9Q9Y5J7 89 aa11.12□□□□□ -0.63
UBE3B-201ENST00000340074 CSNK1G2-AS1Q8NCQ2 148 aa11.11□□□□□ -0.63
UBE3B-201ENST00000340074 XCL2Q9UBD3 114 aa11.11□□□□□ -0.63
UBE3B-201ENST00000340074 TRBV19A0A075B6N1 114 aa11.1□□□□□ -0.63
UBE3B-201ENST00000340074 A0A0J9YWU9 116 aa11.1□□□□□ -0.63
UBE3B-201ENST00000340074 HIST1H1EP10412 219 aaKnown RBP11.1□□□□□ -0.63
UBE3B-201ENST00000340074 ATP6V0CP27449 155 aa11.1□□□□□ -0.63
UBE3B-201ENST00000340074 CNN1P51911 297 aaKnown RBP11.1□□□□□ -0.63
UBE3B-201ENST00000340074 PSG9Q00887 426 aa11.1□□□□□ -0.63
UBE3B-201ENST00000340074 MUC7Q8TAX7 377 aa11.1□□□□□ -0.63
UBE3B-201ENST00000340074 BLNKQ8WV28 456 aa11.1□□□□□ -0.63
UBE3B-201ENST00000340074 C1QTNF4Q9BXJ3 329 aa11.1□□□□□ -0.63
UBE3B-201ENST00000340074 SLC35B3Q9H1N7 401 aa11.1□□□□□ -0.63
UBE3B-201ENST00000340074 OR51M1Q9H341 326 aa11.1□□□□□ -0.63
UBE3B-201ENST00000340074 A8MTW9 85 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 ZNF705FA8MVS1 300 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-201ENST00000340074 DUSP14O95147 198 aaKnown RBP11.09□□□□□ -0.63
UBE3B-201ENST00000340074 M6PRP20645 277 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 RHOBP62745 196 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 ACOT6Q3I5F7 207 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-201ENST00000340074 RPL7L1Q6DKI1 246 aaKnown RBP11.09□□□□□ -0.63
UBE3B-201ENST00000340074 Q6ZNX1 250 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 OR8A1Q8NGG7 326 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 RPUSD4Q96CM3 377 aaKnown RBP11.09□□□□□ -0.63
UBE3B-201ENST00000340074 MFFQ9GZY8 342 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 SH3BGRL3Q9H299 93 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 CSMD3Q7Z407 3707 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 OR7C2O60412 319 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 ZNF253O75346 499 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 EIF3GO75821 320 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBE3B-201ENST00000340074 NDUFB4O95168 129 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 OR10J4P0C629 311 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 RAB2AP61019 212 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-201ENST00000340074 AMTNQ6UX39 209 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 OR11H4Q8NGC9 324 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 FXYD5Q96DB9 178 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 PSMG3Q9BT73 122 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-201ENST00000340074 PAXXQ9BUH6 204 aa11.09□□□□□ -0.63
UBE3B-201ENST00000340074 BORCS7-ASMTA0A0B4J1R7 106 aa11.08□□□□□ -0.64
UBE3B-201ENST00000340074 NBEAP1P0C6P0 100 aa11.08□□□□□ -0.64
UBE3B-201ENST00000340074 PDE6HQ13956 83 aa11.08□□□□□ -0.64
UBE3B-201ENST00000340074 OR2G3Q8NGZ4 309 aa11.08□□□□□ -0.64
UBE3B-201ENST00000340074 RNF141Q8WVD5 230 aa11.08□□□□□ -0.64
UBE3B-201ENST00000340074 ZNF503Q96F45 646 aa11.08□□□□□ -0.64
UBE3B-201ENST00000340074 A0A1W2PPV4 95 aa11.07□□□□□ -0.64
UBE3B-201ENST00000340074 ZNF705EA8MWA4 302 aaPredicted RBP11.07□□□□□ -0.64
UBE3B-201ENST00000340074 PRAC2D3DTV9 90 aa11.07□□□□□ -0.64
UBE3B-201ENST00000340074 C3orf84H3BNL1 204 aa11.07□□□□□ -0.64
UBE3B-201ENST00000340074 KHDC3LQ587J8 217 aa11.07□□□□□ -0.64
UBE3B-201ENST00000340074 FAM122CQ6P4D5 195 aa11.07□□□□□ -0.64
UBE3B-201ENST00000340074 EXOC3-AS1Q8N2X6 119 aa11.07□□□□□ -0.64
UBE3B-201ENST00000340074 OR10G4Q8NGN3 311 aa11.07□□□□□ -0.64
UBE3B-201ENST00000340074 OR10G9Q8NGN4 311 aa11.07□□□□□ -0.64
UBE3B-201ENST00000340074 OR10G7Q8NGN6 311 aa11.07□□□□□ -0.64
UBE3B-201ENST00000340074 X6R8D5 127 aa11.07□□□□□ -0.64
UBE3B-201ENST00000340074 HMSDA8MTL9 139 aa11.06□□□□□ -0.64
UBE3B-201ENST00000340074 TAAR5O14804 337 aa11.06□□□□□ -0.64
UBE3B-201ENST00000340074 TAS2R45P59539 299 aa11.06□□□□□ -0.64
UBE3B-201ENST00000340074 SERF2P84101 59 aa11.06□□□□□ -0.64
UBE3B-201ENST00000340074 ZNF345Q14585 488 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms