RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SLC39A9Q9NUM3 307 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 TRAV5A0A0B4J249 113 aa11.02□□□□□ -0.65
PRKN-201ENST00000338468 MPC2O95563 127 aa11.02□□□□□ -0.65
PRKN-201ENST00000338468 SNRPCP09234 159 aaKnown RBP11.02□□□□□ -0.65
PRKN-201ENST00000338468 MIFP14174 115 aa11.02□□□□□ -0.65
PRKN-201ENST00000338468 CXCL3P19876 107 aa11.02□□□□□ -0.65
PRKN-201ENST00000338468 FGF7P21781 194 aa11.02□□□□□ -0.65
PRKN-201ENST00000338468 NANOS2P60321 138 aaKnown RBP11.02□□□□□ -0.65
PRKN-201ENST00000338468 EBLN2Q6P2I7 272 aa11.02□□□□□ -0.65
PRKN-201ENST00000338468 C1QTNF4Q9BXJ3 329 aa11.02□□□□□ -0.65
PRKN-201ENST00000338468 SLC25A31Q9H0C2 315 aa11.02□□□□□ -0.65
PRKN-201ENST00000338468 PXMP4Q9Y6I8 212 aa11.02□□□□□ -0.65
PRKN-201ENST00000338468 ZNF705DP0CH99 300 aaPredicted RBP11.01□□□□□ -0.65
PRKN-201ENST00000338468 ZNF705BP0CI00 300 aaPredicted RBP11.01□□□□□ -0.65
PRKN-201ENST00000338468 B2MP61769 119 aa11.01□□□□□ -0.65
PRKN-201ENST00000338468 PSG9Q00887 426 aa11.01□□□□□ -0.65
PRKN-201ENST00000338468 CEMP1Q6PRD7 247 aaPredicted RBP11.01□□□□□ -0.65
PRKN-201ENST00000338468 ZNF705AQ6ZN79 300 aaPredicted RBP11.01□□□□□ -0.65
PRKN-201ENST00000338468 Q6ZRG5 221 aa11.01□□□□□ -0.65
PRKN-201ENST00000338468 THAP6Q8TBB0 222 aa11.01□□□□□ -0.65
PRKN-201ENST00000338468 NPCDR1Q9BY65 106 aa11.01□□□□□ -0.65
PRKN-201ENST00000338468 NUPR2A6NF83 97 aa11□□□□□ -0.65
PRKN-201ENST00000338468 ZNF705FA8MVS1 300 aaPredicted RBP11□□□□□ -0.65
PRKN-201ENST00000338468 H3BQ15 152 aa11□□□□□ -0.65
PRKN-201ENST00000338468 H3BTX0 84 aa11□□□□□ -0.65
PRKN-201ENST00000338468 SLC17A3O00476 420 aa11□□□□□ -0.65
PRKN-201ENST00000338468 MPDU1O75352 247 aa11□□□□□ -0.65
PRKN-201ENST00000338468 IGLC2P0DOY2 106 aa11□□□□□ -0.65
PRKN-201ENST00000338468 PRB4P10163 310 aaPredicted RBP11□□□□□ -0.65
PRKN-201ENST00000338468 CNN1P51911 297 aaKnown RBP11□□□□□ -0.65
PRKN-201ENST00000338468 CLINT1Q14677 625 aa11□□□□□ -0.65
PRKN-201ENST00000338468 GCSAMLQ5JQS6 135 aa11□□□□□ -0.65
PRKN-201ENST00000338468 BPIFA4PQ86YQ2 179 aa11□□□□□ -0.65
PRKN-201ENST00000338468 OR1L4Q8NGR5 311 aa11□□□□□ -0.65
PRKN-201ENST00000338468 C11orf45Q8TAV5 145 aa11□□□□□ -0.65
PRKN-201ENST00000338468 ZNF331Q9NQX6 463 aaPredicted RBP11□□□□□ -0.65
PRKN-201ENST00000338468 RNF24Q9Y225 148 aa11□□□□□ -0.65
PRKN-201ENST00000338468 CXCL2P19875 107 aa10.99□□□□□ -0.65
PRKN-201ENST00000338468 PSG3Q16557 428 aa10.99□□□□□ -0.65
PRKN-201ENST00000338468 C1orf158Q8N1D5 194 aa10.99□□□□□ -0.65
PRKN-201ENST00000338468 ZNF738Q8NE65 137 aa10.99□□□□□ -0.65
PRKN-201ENST00000338468 OR11H7Q8NGC8 314 aa10.99□□□□□ -0.65
PRKN-201ENST00000338468 PHLDA1Q8WV24 401 aaPredicted RBP10.99□□□□□ -0.65
PRKN-201ENST00000338468 LINC00476Q8WZB0 136 aa10.99□□□□□ -0.65
PRKN-201ENST00000338468 SAT2Q96F10 170 aaPredicted RBP10.99□□□□□ -0.65
PRKN-201ENST00000338468 PFDN5Q99471 154 aa10.99□□□□□ -0.65
PRKN-201ENST00000338468 WDR61Q9GZS3 305 aaKnown RBP10.99□□□□□ -0.65
PRKN-201ENST00000338468 HRH4Q9H3N8 390 aa10.99□□□□□ -0.65
PRKN-201ENST00000338468 MBD2Q9UBB5 411 aa10.99□□□□□ -0.65
PRKN-201ENST00000338468 LCN15Q6UWW0 184 aa10.98□□□□□ -0.65
PRKN-201ENST00000338468 OR8A1Q8NGG7 326 aa10.98□□□□□ -0.65
PRKN-201ENST00000338468 NEU1Q99519 415 aa10.98□□□□□ -0.65
PRKN-201ENST00000338468 MFFQ9GZY8 342 aa10.98□□□□□ -0.65
PRKN-201ENST00000338468 CELA1Q9UNI1 258 aa10.98□□□□□ -0.65
PRKN-201ENST00000338468 HSPB11Q9Y547 144 aa10.98□□□□□ -0.65
PRKN-201ENST00000338468 FRAS1Q86XX4 4008 aa10.98□□□□□ -0.65
PRKN-201ENST00000338468 CRXO43186 299 aaPredicted RBP10.97□□□□□ -0.65
PRKN-201ENST00000338468 DUSP14O95147 198 aaKnown RBP10.97□□□□□ -0.65
PRKN-201ENST00000338468 FCN2Q15485 313 aa10.97□□□□□ -0.65
PRKN-201ENST00000338468 LRRC20Q8TCA0 184 aa10.97□□□□□ -0.65
PRKN-201ENST00000338468 SLC50A1Q9BRV3 221 aa10.97□□□□□ -0.65
PRKN-201ENST00000338468 ZNF586Q9NXT0 402 aa10.97□□□□□ -0.65
PRKN-201ENST00000338468 VPS13DQ5THJ4 4388 aa10.96□□□□□ -0.65
PRKN-201ENST00000338468 PRAC2D3DTV9 90 aa10.96□□□□□ -0.65
PRKN-201ENST00000338468 M0R2Z0 102 aa10.96□□□□□ -0.65
PRKN-201ENST00000338468 PET100P0DJ07 73 aa10.96□□□□□ -0.65
PRKN-201ENST00000338468 RPL12P30050 165 aaKnown RBP10.96□□□□□ -0.65
PRKN-201ENST00000338468 RPUSD4Q96CM3 377 aaKnown RBP10.96□□□□□ -0.65
PRKN-201ENST00000338468 ATP5SQ99766 215 aa10.96□□□□□ -0.65
PRKN-201ENST00000338468 WFDC1Q9HC57 220 aa10.96□□□□□ -0.65
PRKN-201ENST00000338468 IGHV3OR16-12A0A075B7B8 117 aa10.95□□□□□ -0.66
PRKN-201ENST00000338468 LY6G6CO95867 125 aa10.95□□□□□ -0.66
PRKN-201ENST00000338468 HIST1H1AQ02539 215 aaPredicted RBP10.95□□□□□ -0.66
PRKN-201ENST00000338468 SPINK13Q1W4C9 94 aa10.95□□□□□ -0.66
PRKN-201ENST00000338468 FAM167A-AS1Q96KT0 104 aa10.95□□□□□ -0.66
PRKN-201ENST00000338468 IGF2BP2-AS1Q96M15 143 aa10.95□□□□□ -0.66
PRKN-201ENST00000338468 SLC25A2Q9BXI2 301 aa10.95□□□□□ -0.66
PRKN-201ENST00000338468 SMIM3Q9BZL3 60 aa10.95□□□□□ -0.66
PRKN-201ENST00000338468 TMEM14CQ9P0S9 112 aa10.95□□□□□ -0.66
PRKN-201ENST00000338468 KLK5Q9Y337 293 aaPredicted RBP10.95□□□□□ -0.66
PRKN-201ENST00000338468 TRBV19A0A075B6N1 114 aa10.94□□□□□ -0.66
PRKN-201ENST00000338468 SMIM9A6NGZ8 99 aa10.94□□□□□ -0.66
PRKN-201ENST00000338468 NDUFB4O95168 129 aa10.94□□□□□ -0.66
PRKN-201ENST00000338468 PYYP10082 97 aa10.94□□□□□ -0.66
PRKN-201ENST00000338468 GUK1Q16774 197 aa10.94□□□□□ -0.66
PRKN-201ENST00000338468 C12orf74Q32Q52 190 aa10.94□□□□□ -0.66
PRKN-201ENST00000338468 Q6ZTC4 211 aa10.94□□□□□ -0.66
PRKN-201ENST00000338468 MIR17HGQ75NE6 70 aa10.94□□□□□ -0.66
PRKN-201ENST00000338468 MED28Q9H204 178 aa10.94□□□□□ -0.66
PRKN-201ENST00000338468 RFNGQ9Y644 331 aa10.94□□□□□ -0.66
PRKN-201ENST00000338468 BOLA2-SMG1P6H3BVE0 249 aa10.93□□□□□ -0.66
PRKN-201ENST00000338468 ZNF253O75346 499 aa10.93□□□□□ -0.66
PRKN-201ENST00000338468 AMBPP02760 352 aa10.93□□□□□ -0.66
PRKN-201ENST00000338468 HIST1H1EP10412 219 aaKnown RBP10.93□□□□□ -0.66
PRKN-201ENST00000338468 Q5BKY6 102 aa10.93□□□□□ -0.66
PRKN-201ENST00000338468 BAP18Q8IXM2 172 aa10.93□□□□□ -0.66
PRKN-201ENST00000338468 GOLT1BQ9Y3E0 138 aa10.93□□□□□ -0.66
PRKN-201ENST00000338468 TRAV12-2A0A075B6T6 113 aa10.92□□□□□ -0.66
PRKN-201ENST00000338468 PRM2P04554 102 aa10.92□□□□□ -0.66
PRKN-201ENST00000338468 ZNF767PQ75MW2 155 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms