RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 TMEM190Q8WZ59 177 aa11.91□□□□□ -0.5
LIMS1-202ENST00000338045 ESM1Q9NQ30 184 aa11.91□□□□□ -0.5
LIMS1-202ENST00000338045 IGHV3OR16-8A0A075B7F1 116 aa11.9□□□□□ -0.5
LIMS1-202ENST00000338045 NDUFA4O00483 81 aa11.9□□□□□ -0.5
LIMS1-202ENST00000338045 BUB3O43684 328 aa11.9□□□□□ -0.5
LIMS1-202ENST00000338045 LINC01551Q86U37 167 aa11.9□□□□□ -0.5
LIMS1-202ENST00000338045 HIST1H2BAQ96A08 127 aa11.9□□□□□ -0.5
LIMS1-202ENST00000338045 SMR3AQ99954 134 aa11.9□□□□□ -0.5
LIMS1-202ENST00000338045 Q9H3A6 140 aa11.9□□□□□ -0.5
LIMS1-202ENST00000338045 U3KQE9 123 aa11.9□□□□□ -0.5
LIMS1-202ENST00000338045 OTOGQ6ZRI0 2925 aa11.9□□□□□ -0.5
LIMS1-202ENST00000338045 PGPA6NDG6 321 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 C5orf52A6NGY3 159 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 H3BTX0 84 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 PDE6HQ13956 83 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 ADIRFQ15847 76 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 LYPD1Q8N2G4 141 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 OTORQ9NRC9 128 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 LY96Q9Y6Y9 160 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 FAM181BA6NEQ2 426 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 HELTA6NFD8 242 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 PEX7O00628 323 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 LY6G6DO95868 133 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 C5orf17Q8NAS9 161 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 METTL26Q96S19 204 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 TMEM242Q9NWH2 141 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 EPDR1Q9UM22 224 aa11.89□□□□□ -0.51
LIMS1-202ENST00000338045 RPL15P61313 204 aaKnown RBP11.88□□□□□ -0.51
LIMS1-202ENST00000338045 C1orf194Q5T5A4 169 aa11.88□□□□□ -0.51
LIMS1-202ENST00000338045 SIGLEC15Q6ZMC9 328 aa11.88□□□□□ -0.51
LIMS1-202ENST00000338045 OR8I2Q8N0Y5 310 aa11.88□□□□□ -0.51
LIMS1-202ENST00000338045 C17orf77Q96MU5 243 aa11.88□□□□□ -0.51
LIMS1-202ENST00000338045 PEF1Q9UBV8 284 aaKnown RBP11.88□□□□□ -0.51
LIMS1-202ENST00000338045 GGCTO75223 188 aaKnown RBP11.87□□□□□ -0.51
LIMS1-202ENST00000338045 SLC25A5P05141 298 aaKnown RBP11.87□□□□□ -0.51
LIMS1-202ENST00000338045 RPLP1P05386 114 aaKnown RBP11.87□□□□□ -0.51
LIMS1-202ENST00000338045 Q6ZSV7 163 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 GPR82Q96P67 336 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 CDC42EP3Q9UKI2 254 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 GOLT1BQ9Y3E0 138 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 SMAD5-AS1Q9Y6J3 95 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 PGPEP1LA6NFU8 196 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 SRD5A1P18405 259 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 UNQ9165/PRO28630Q6UXU0 137 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 OCC1Q8TAD7 63 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 ISOC2Q96AB3 205 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 CTDSP1Q9GZU7 261 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 KLF12Q9Y4X4 402 aa11.87□□□□□ -0.51
LIMS1-202ENST00000338045 CXorf65A6NEN9 183 aa11.86□□□□□ -0.51
LIMS1-202ENST00000338045 SLC17A3O00476 420 aa11.86□□□□□ -0.51
LIMS1-202ENST00000338045 ZNF253O75346 499 aa11.86□□□□□ -0.51
LIMS1-202ENST00000338045 RNASE1P07998 156 aaKnown RBP11.86□□□□□ -0.51
LIMS1-202ENST00000338045 GNG5P63218 68 aa11.86□□□□□ -0.51
LIMS1-202ENST00000338045 CENPWQ5EE01 88 aa11.86□□□□□ -0.51
LIMS1-202ENST00000338045 UBE2E2Q96LR5 201 aa11.86□□□□□ -0.51
LIMS1-202ENST00000338045 IGF2BP2-AS1Q96M15 143 aa11.86□□□□□ -0.51
LIMS1-202ENST00000338045 ATG101Q9BSB4 218 aa11.86□□□□□ -0.51
LIMS1-202ENST00000338045 A0A087X0K7 114 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 COLCA2A8K830 154 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 APOHP02749 345 aaPredicted RBP11.85□□□□□ -0.51
LIMS1-202ENST00000338045 MT-ND4LP03901 98 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 TCRAP04437 139 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 GNG4P50150 75 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 CNN1P51911 297 aaKnown RBP11.85□□□□□ -0.51
LIMS1-202ENST00000338045 EXOC3-AS1Q8N2X6 119 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 C15orf54Q8N8G6 183 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 LINC00479Q96M42 142 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 YPEL4Q96NS1 127 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 CD99P14209 185 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 TMEM183BQ1AE95 376 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 SMIM15Q7Z3B0 74 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 KLHDC1Q8N7A1 406 aa11.85□□□□□ -0.51
LIMS1-202ENST00000338045 ZNF418Q8TF45 676 aaPredicted RBP11.85□□□□□ -0.51
LIMS1-202ENST00000338045 A0A1W2PPQ1 181 aa11.84□□□□□ -0.51
LIMS1-202ENST00000338045 K7EN84 100 aa11.84□□□□□ -0.51
LIMS1-202ENST00000338045 ZNF207O43670 478 aaKnown RBP11.84□□□□□ -0.51
LIMS1-202ENST00000338045 IGLV2-8P01709 118 aa11.84□□□□□ -0.51
LIMS1-202ENST00000338045 LGALS1P09382 135 aaKnown RBP11.84□□□□□ -0.51
LIMS1-202ENST00000338045 CDKN1BP46527 198 aa11.84□□□□□ -0.51
LIMS1-202ENST00000338045 HILS1P60008 231 aa11.84□□□□□ -0.51
LIMS1-202ENST00000338045 GPHB5Q86YW7 130 aa11.84□□□□□ -0.51
LIMS1-202ENST00000338045 ANAPC16Q96DE5 110 aa11.84□□□□□ -0.51
LIMS1-202ENST00000338045 OR5B12Q96R08 314 aa11.84□□□□□ -0.51
LIMS1-202ENST00000338045 AURKAIP1Q9NWT8 199 aaPredicted RBP11.84□□□□□ -0.51
LIMS1-202ENST00000338045 HIVEP2P31629 2446 aa11.84□□□□□ -0.51
LIMS1-202ENST00000338045 ISLRO14498 428 aa11.83□□□□□ -0.52
LIMS1-202ENST00000338045 DDTP30046 118 aa11.83□□□□□ -0.52
LIMS1-202ENST00000338045 GALR1P47211 349 aa11.83□□□□□ -0.52
LIMS1-202ENST00000338045 PKIAP61925 76 aa11.83□□□□□ -0.52
LIMS1-202ENST00000338045 PSG9Q00887 426 aa11.83□□□□□ -0.52
LIMS1-202ENST00000338045 SNRPEP62304 92 aaKnown RBP11.83□□□□□ -0.52
LIMS1-202ENST00000338045 CMTM2Q8TAZ6 248 aa11.83□□□□□ -0.52
LIMS1-202ENST00000338045 WIPF2Q8TF74 440 aaPredicted RBP11.83□□□□□ -0.52
LIMS1-202ENST00000338045 GLMPQ8WWB7 406 aa11.83□□□□□ -0.52
LIMS1-202ENST00000338045 TRAV34A0A0B4J273 112 aa11.82□□□□□ -0.52
LIMS1-202ENST00000338045 IGHV3-66A0A0C4DH42 116 aa11.82□□□□□ -0.52
LIMS1-202ENST00000338045 TSTD3H0UI37 97 aa11.82□□□□□ -0.52
LIMS1-202ENST00000338045 K7EMT4 169 aa11.82□□□□□ -0.52
LIMS1-202ENST00000338045 FAM106AQ4KMX7 169 aa11.82□□□□□ -0.52
LIMS1-202ENST00000338045 SFRP2Q96HF1 295 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms