RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 PDE6DO43924 150 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 CA1P00915 261 aaPredicted RBP12.55□□□□□ -0.4
PDGFB-201ENST00000331163 TYMSP04818 313 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 LINC00614P0C842 121 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 SRIP30626 198 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 BPIFB3P59826 476 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 PAFAH1B2P68402 229 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 BORCS7Q96B45 105 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 TP73-AS1Q9UF72 201 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 ZFP30Q9Y2G7 519 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 MOB4Q9Y3A3 225 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 FAM181BA6NEQ2 426 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 C8orf46Q8TAG6 207 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 LAMTOR2Q9Y2Q5 125 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 IGLC7A0M8Q6 106 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 CCL25O15444 150 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 IGHV4-31P0DP07 118 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 RCHY1Q96PM5 261 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 WDR83OSQ9Y284 106 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 TRAV41A0A0B4J266 112 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 HYPMO75409 117 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 PSG1P11464 419 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 MFAP4P55083 255 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 PAX8Q06710 450 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 CLEC5AQ9NY25 188 aa12.54□□□□□ -0.4
PDGFB-201ENST00000331163 ZNF562Q6V9R5 426 aa12.53□□□□□ -0.4
PDGFB-201ENST00000331163 C20orf144Q9BQM9 153 aa12.53□□□□□ -0.4
PDGFB-201ENST00000331163 ZNF257Q9Y2Q1 563 aa12.53□□□□□ -0.4
PDGFB-201ENST00000331163 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
PDGFB-201ENST00000331163 SCGB2A1O75556 95 aa12.53□□□□□ -0.4
PDGFB-201ENST00000331163 RPEL1Q2QD12 228 aa12.53□□□□□ -0.4
PDGFB-201ENST00000331163 Q8N9W7 124 aa12.53□□□□□ -0.4
PDGFB-201ENST00000331163 F11RQ9Y624 299 aaKnown RBP12.53□□□□□ -0.4
PDGFB-201ENST00000331163 IGHV7-81A0A0B4J1V7 117 aa12.52□□□□□ -0.4
PDGFB-201ENST00000331163 SLC25A5P05141 298 aaKnown RBP12.52□□□□□ -0.4
PDGFB-201ENST00000331163 LINC00310P59036 64 aa12.52□□□□□ -0.4
PDGFB-201ENST00000331163 TEX43Q6ZNM6 134 aa12.52□□□□□ -0.4
PDGFB-201ENST00000331163 TMEM144Q7Z5S9 345 aa12.52□□□□□ -0.4
PDGFB-201ENST00000331163 RABAC1Q9UI14 185 aa12.52□□□□□ -0.4
PDGFB-201ENST00000331163 HIVEP1P15822 2718 aa12.52□□□□□ -0.4
PDGFB-201ENST00000331163 IGKV1OR2-108A0A075B7D4 117 aa12.52□□□□□ -0.41
PDGFB-201ENST00000331163 TAS2R45P59539 299 aa12.52□□□□□ -0.41
PDGFB-201ENST00000331163 ATP5G2Q06055 141 aa12.52□□□□□ -0.41
PDGFB-201ENST00000331163 PQLC2Q6ZP29 291 aa12.52□□□□□ -0.41
PDGFB-201ENST00000331163 WFDC12Q8WWY7 111 aa12.52□□□□□ -0.41
PDGFB-201ENST00000331163 DPF1Q92782 380 aa12.52□□□□□ -0.41
PDGFB-201ENST00000331163 KLK15Q9H2R5 256 aa12.52□□□□□ -0.41
PDGFB-201ENST00000331163 KCNIP2Q9NS61 270 aa12.52□□□□□ -0.41
PDGFB-201ENST00000331163 YTHDF2Q9Y5A9 579 aaKnown RBP12.52□□□□□ -0.41
PDGFB-201ENST00000331163 DEFB136Q30KP8 78 aa12.52□□□□□ -0.41
PDGFB-201ENST00000331163 OR52E5Q8NH55 327 aa12.52□□□□□ -0.41
PDGFB-201ENST00000331163 TIMM9Q9Y5J7 89 aa12.52□□□□□ -0.41
PDGFB-201ENST00000331163 COL6A5A8TX70 2615 aa12.51□□□□□ -0.41
PDGFB-201ENST00000331163 CRYBB3P26998 211 aa12.51□□□□□ -0.41
PDGFB-201ENST00000331163 OR4B1Q8NGF8 309 aa12.51□□□□□ -0.41
PDGFB-201ENST00000331163 UQCR10Q9UDW1 63 aa12.51□□□□□ -0.41
PDGFB-201ENST00000331163 M0QZ24 198 aa12.51□□□□□ -0.41
PDGFB-201ENST00000331163 MFAP2P55001 183 aa12.51□□□□□ -0.41
PDGFB-201ENST00000331163 FOXL1Q12952 345 aa12.51□□□□□ -0.41
PDGFB-201ENST00000331163 GAGE1Q13065 139 aa12.51□□□□□ -0.41
PDGFB-201ENST00000331163 CFHR4Q92496 578 aa12.51□□□□□ -0.41
PDGFB-201ENST00000331163 NACAE9PAV3 2078 aa12.51□□□□□ -0.41
PDGFB-201ENST00000331163 IGKV3-20P01619 116 aa12.5□□□□□ -0.41
PDGFB-201ENST00000331163 CAMPP49913 170 aa12.5□□□□□ -0.41
PDGFB-201ENST00000331163 PAXXQ9BUH6 204 aa12.5□□□□□ -0.41
PDGFB-201ENST00000331163 HIGD1AQ9Y241 93 aa12.5□□□□□ -0.41
PDGFB-201ENST00000331163 C2orf83Q53S99 150 aa12.5□□□□□ -0.41
PDGFB-201ENST00000331163 RNF2Q99496 336 aa12.5□□□□□ -0.41
PDGFB-201ENST00000331163 IL36BQ9NZH7 164 aa12.5□□□□□ -0.41
PDGFB-201ENST00000331163 K7EN84 100 aa12.5□□□□□ -0.41
PDGFB-201ENST00000331163 HSBP1O75506 76 aa12.5□□□□□ -0.41
PDGFB-201ENST00000331163 GNG4P50150 75 aa12.5□□□□□ -0.41
PDGFB-201ENST00000331163 RNASEKQ6P5S7 137 aaKnown RBP12.5□□□□□ -0.41
PDGFB-201ENST00000331163 KMT2BQ9UMN6 2715 aaPredicted RBP12.5□□□□□ -0.41
PDGFB-201ENST00000331163 ODF3BA8MYP8 253 aa12.49□□□□□ -0.41
PDGFB-201ENST00000331163 GPX1P07203 203 aa12.49□□□□□ -0.41
PDGFB-201ENST00000331163 P0C879 139 aa12.49□□□□□ -0.41
PDGFB-201ENST00000331163 C3orf79P0CE67 100 aa12.49□□□□□ -0.41
PDGFB-201ENST00000331163 ALKBH7Q9BT30 221 aaPredicted RBP12.49□□□□□ -0.41
PDGFB-201ENST00000331163 TECRQ9NZ01 308 aaKnown RBP12.49□□□□□ -0.41
PDGFB-201ENST00000331163 MORN5Q5VZ52 161 aa12.49□□□□□ -0.41
PDGFB-201ENST00000331163 STAB1Q9NY15 2570 aa12.49□□□□□ -0.41
PDGFB-201ENST00000331163 PARD6GQ9BYG4 376 aaPredicted RBP12.49□□□□□ -0.41
PDGFB-201ENST00000331163 PGPA6NDG6 321 aa12.48□□□□□ -0.41
PDGFB-201ENST00000331163 GNG5P63218 68 aa12.48□□□□□ -0.41
PDGFB-201ENST00000331163 CENPWQ5EE01 88 aa12.48□□□□□ -0.41
PDGFB-201ENST00000331163 ARL2-SNX15V9GYD0 113 aa12.48□□□□□ -0.41
PDGFB-201ENST00000331163 ZFHX3Q15911 3703 aa12.48□□□□□ -0.41
PDGFB-201ENST00000331163 HTN1P15515 57 aa12.48□□□□□ -0.41
PDGFB-201ENST00000331163 TCTAP57738 103 aa12.48□□□□□ -0.41
PDGFB-201ENST00000331163 NPFFR1Q9GZQ6 430 aa12.48□□□□□ -0.41
PDGFB-201ENST00000331163 SLC45A2Q9UMX9 530 aa12.48□□□□□ -0.41
PDGFB-201ENST00000331163 MCRIP2Q9BUT9 160 aaKnown RBP12.47□□□□□ -0.41
PDGFB-201ENST00000331163 MGAM2Q2M2H8 2515 aa12.47□□□□□ -0.41
PDGFB-201ENST00000331163 LY6LH3BQJ8 138 aa12.47□□□□□ -0.41
PDGFB-201ENST00000331163 UBE2G1P62253 170 aa12.47□□□□□ -0.41
PDGFB-201ENST00000331163 PMCHL1Q16048 86 aa12.47□□□□□ -0.41
PDGFB-201ENST00000331163 FAM71F2Q6NXP2 309 aa12.47□□□□□ -0.41
PDGFB-201ENST00000331163 ZNF738Q8NE65 137 aa12.47□□□□□ -0.41
PDGFB-201ENST00000331163 HELTA6NFD8 242 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms