RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 VSIRQ9H7M9 311 aa12.43□□□□□ -0.42
TUBB3-201ENST00000315491 C2CD3Q4AC94 2353 aa12.42□□□□□ -0.42
TUBB3-201ENST00000315491 BMPR1BO00238 502 aa12.42□□□□□ -0.42
TUBB3-201ENST00000315491 IFNA1P01562 189 aa12.42□□□□□ -0.42
TUBB3-201ENST00000315491 TYMSP04818 313 aa12.42□□□□□ -0.42
TUBB3-201ENST00000315491 KRTAP24-1Q3LI83 254 aa12.42□□□□□ -0.42
TUBB3-201ENST00000315491 ACTL10Q5JWF8 245 aa12.42□□□□□ -0.42
TUBB3-201ENST00000315491 OR51G1Q8NGK1 321 aa12.42□□□□□ -0.42
TUBB3-201ENST00000315491 C4orf3Q8WVX3 66 aa12.42□□□□□ -0.42
TUBB3-201ENST00000315491 ZNF414Q96IQ9 312 aa12.42□□□□□ -0.42
TUBB3-201ENST00000315491 CITED2Q99967 270 aaPredicted RBP12.42□□□□□ -0.42
TUBB3-201ENST00000315491 IGHV3-35A0A0C4DH35 117 aa12.41□□□□□ -0.42
TUBB3-201ENST00000315491 KRTAP10-3P60369 221 aa12.41□□□□□ -0.42
TUBB3-201ENST00000315491 TMEM41BQ5BJD5 291 aa12.41□□□□□ -0.42
TUBB3-201ENST00000315491 GCSAMLQ5JQS6 135 aa12.41□□□□□ -0.42
TUBB3-201ENST00000315491 KLHL30-AS1Q8NEE0 82 aa12.41□□□□□ -0.42
TUBB3-201ENST00000315491 TSSC4Q9Y5U2 329 aaPredicted RBP12.41□□□□□ -0.42
TUBB3-201ENST00000315491 PLP1P60201 277 aa12.41□□□□□ -0.42
TUBB3-201ENST00000315491 LYZP61626 148 aa12.41□□□□□ -0.42
TUBB3-201ENST00000315491 GBGT1Q8N5D6 347 aa12.41□□□□□ -0.42
TUBB3-201ENST00000315491 RPRMQ9NS64 109 aa12.41□□□□□ -0.42
TUBB3-201ENST00000315491 WI2-2373I1.2A0A1W2PRP0 233 aa12.4□□□□□ -0.42
TUBB3-201ENST00000315491 IL4P05112 153 aa12.4□□□□□ -0.42
TUBB3-201ENST00000315491 ORM2P19652 201 aa12.4□□□□□ -0.42
TUBB3-201ENST00000315491 PCP4P48539 62 aa12.4□□□□□ -0.42
TUBB3-201ENST00000315491 TOMM20LQ6UXN7 152 aa12.4□□□□□ -0.42
TUBB3-201ENST00000315491 OR10G9Q8NGN4 311 aa12.4□□□□□ -0.42
TUBB3-201ENST00000315491 OR10G7Q8NGN6 311 aa12.4□□□□□ -0.42
TUBB3-201ENST00000315491 OR1L4Q8NGR5 311 aa12.4□□□□□ -0.42
TUBB3-201ENST00000315491 OR1B1Q8NGR6 318 aa12.4□□□□□ -0.42
TUBB3-201ENST00000315491 RNF125Q96EQ8 232 aa12.4□□□□□ -0.42
TUBB3-201ENST00000315491 IMMP2LQ96T52 175 aa12.4□□□□□ -0.42
TUBB3-201ENST00000315491 IGHV4OR15-8A0A075B7B6 117 aa12.39□□□□□ -0.43
TUBB3-201ENST00000315491 A0A087WW49 117 aa12.39□□□□□ -0.43
TUBB3-201ENST00000315491 COX7A2P2O60397 106 aa12.39□□□□□ -0.43
TUBB3-201ENST00000315491 GALR1P47211 349 aa12.39□□□□□ -0.43
TUBB3-201ENST00000315491 ANAPC16Q96DE5 110 aa12.39□□□□□ -0.43
TUBB3-201ENST00000315491 NF1P21359 2839 aa12.39□□□□□ -0.43
TUBB3-201ENST00000315491 A0A1W2PRX2 142 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 NDUFA4O00483 81 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 HYPMO75409 117 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 OR5G3P0C626 314 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 TMEM241Q24JQ0 296 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 PATE2Q6UY27 113 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 C8orf86Q6ZUL3 223 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 TMEM37Q8WXS4 190 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 ZFAND3Q9H8U3 227 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 DNAJC4Q9NNZ3 241 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 NAGKQ9UJ70 344 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 H7BYZ3 331 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 RPEL1Q2QD12 228 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 DEFB136Q30KP8 78 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 C10orf113Q5VZT2 155 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 RPP25LQ8N5L8 163 aaKnown RBP12.38□□□□□ -0.43
TUBB3-201ENST00000315491 GATAD1Q8WUU5 269 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 BTF3L4Q96K17 158 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 C20orf144Q9BQM9 153 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 C19orf24Q9BVV8 132 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 JMJD1CQ15652 2540 aa12.38□□□□□ -0.43
TUBB3-201ENST00000315491 OR11H1Q8NG94 326 aa12.37□□□□□ -0.43
TUBB3-201ENST00000315491 OR1N2Q8NGR9 330 aa12.37□□□□□ -0.43
TUBB3-201ENST00000315491 MRPL27Q9P0M9 148 aaKnown RBP12.37□□□□□ -0.43
TUBB3-201ENST00000315491 HIGD1AQ9Y241 93 aa12.37□□□□□ -0.43
TUBB3-201ENST00000315491 IGHV3OR16-8A0A075B7F1 116 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 A0A1W2PPV4 95 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 LINC01619G3V211 115 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 NPSP0C0P6 89 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 CDC34P49427 236 aaPredicted RBP12.36□□□□□ -0.43
TUBB3-201ENST00000315491 RHOBP62745 196 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 RPL23P62829 140 aaKnown RBP12.36□□□□□ -0.43
TUBB3-201ENST00000315491 ADIRFQ15847 76 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 ZNF726P1Q15940 193 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 FAM78BQ5VT40 261 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 GPHB5Q86YW7 130 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 DPF1Q92782 380 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 RNF2Q99496 336 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 SLC25A22Q9H936 323 aa12.36□□□□□ -0.43
TUBB3-201ENST00000315491 TMEM250H0YL14 139 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 SCGB1D1O95968 90 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 HOXD3P31249 432 aaPredicted RBP12.35□□□□□ -0.43
TUBB3-201ENST00000315491 CNN1P51911 297 aaKnown RBP12.35□□□□□ -0.43
TUBB3-201ENST00000315491 RANP62826 216 aaKnown RBP12.35□□□□□ -0.43
TUBB3-201ENST00000315491 C21orf62-AS1Q17RA5 79 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 FAM106AQ4KMX7 169 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 SPATA31B1PQ5VZV4 182 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 UNQ9165/PRO28630Q6UXU0 137 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 NDUFA11Q86Y39 141 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 TMEM190Q8WZ59 177 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 UHRF2Q96PU4 802 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 SMIM7Q9BQ49 75 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 MRPL32Q9BYC8 188 aaKnown RBP12.35□□□□□ -0.43
TUBB3-201ENST00000315491 SEPSECSQ9HD40 501 aaKnown RBP12.35□□□□□ -0.43
TUBB3-201ENST00000315491 FUT9Q9Y231 359 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 NIPBLQ6KC79 2804 aaeCLIP12.35□□□□□ -0.43
TUBB3-201ENST00000315491 CTXND1A0A1B0GTU2 59 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 MAP1LC3B2A6NCE7 125 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 ADARB2-AS1A8MUL3 147 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 MIR17HGQ75NE6 70 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 LINC00305Q7Z4B0 112 aa12.35□□□□□ -0.43
TUBB3-201ENST00000315491 DUX3Q96PT4 197 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms