RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HLA-DRB4X5D2U9 266 aa6.65□□□□□ -1.35
HMGN1-201ENST00000288344 DNAH6Q9C0G6 4158 aa6.64□□□□□ -1.35
HMGN1-201ENST00000288344 A0A0J9YX75 114 aa6.64□□□□□ -1.35
HMGN1-201ENST00000288344 H3BQ15 152 aa6.64□□□□□ -1.35
HMGN1-201ENST00000288344 MPDU1O75352 247 aa6.64□□□□□ -1.35
HMGN1-201ENST00000288344 RLN2P04090 185 aa6.64□□□□□ -1.35
HMGN1-201ENST00000288344 BAXQ07812 192 aa6.64□□□□□ -1.35
HMGN1-201ENST00000288344 LRRC37A5PQ49AS3 106 aa6.64□□□□□ -1.35
HMGN1-201ENST00000288344 LINC00305Q7Z4B0 112 aa6.64□□□□□ -1.35
HMGN1-201ENST00000288344 GATAD1Q8WUU5 269 aa6.64□□□□□ -1.35
HMGN1-201ENST00000288344 FAM167A-AS1Q96KT0 104 aa6.64□□□□□ -1.35
HMGN1-201ENST00000288344 WDR61Q9GZS3 305 aaKnown RBP6.64□□□□□ -1.35
HMGN1-201ENST00000288344 DOK5Q9P104 306 aa6.64□□□□□ -1.35
HMGN1-201ENST00000288344 DNAH10Q8IVF4 4471 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 DNAH2Q9P225 4427 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 TRAV5A0A0B4J249 113 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 F6UB75 175 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 SSNA1O43805 119 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 SPP1P10451 314 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 RPL7P18124 248 aaKnown RBP6.63□□□□□ -1.35
HMGN1-201ENST00000288344 GALR1P47211 349 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 MEOX2P50222 304 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 SNRPD3P62318 126 aaKnown RBP6.63□□□□□ -1.35
HMGN1-201ENST00000288344 HBG1P69891 147 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 HBG2P69892 147 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 GCSAMLQ5JQS6 135 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 ACTL10Q5JWF8 245 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 IGFL4Q6B9Z1 124 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 MORN3Q6PF18 240 aaPredicted RBP6.63□□□□□ -1.35
HMGN1-201ENST00000288344 FOXI2Q6ZQN5 318 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 STHQ8IWL8 128 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 Q8NAQ8 132 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 NPCDR1Q9BY65 106 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 PARD6GQ9BYG4 376 aaPredicted RBP6.63□□□□□ -1.35
HMGN1-201ENST00000288344 SLC25A31Q9H0C2 315 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 SLC25A22Q9H936 323 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 ZNF331Q9NQX6 463 aaPredicted RBP6.63□□□□□ -1.35
HMGN1-201ENST00000288344 SLC39A9Q9NUM3 307 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 MBD2Q9UBB5 411 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 HSPB11Q9Y547 144 aa6.63□□□□□ -1.35
HMGN1-201ENST00000288344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.63□□□□□ -1.35
HMGN1-201ENST00000288344 CRXO43186 299 aaPredicted RBP6.62□□□□□ -1.35
HMGN1-201ENST00000288344 OR5G3P0C626 314 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 RBMY1A1P0DJD3 496 aaKnown RBP6.62□□□□□ -1.35
HMGN1-201ENST00000288344 RBMY1CP0DJD4 496 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 HLA-DMBP28068 263 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 RPL12P30050 165 aaKnown RBP6.62□□□□□ -1.35
HMGN1-201ENST00000288344 RAP2BP61225 183 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 RBMY1FQ15415 496 aaKnown RBP6.62□□□□□ -1.35
HMGN1-201ENST00000288344 TMEM41BQ5BJD5 291 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 SAMD13Q5VXD3 122 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 ZNF705AQ6ZN79 300 aaPredicted RBP6.62□□□□□ -1.35
HMGN1-201ENST00000288344 STX12Q86Y82 276 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 KRTAP4-12Q9BQ66 201 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 HRH4Q9H3N8 390 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 ZNF586Q9NXT0 402 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 RFNGQ9Y644 331 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 PXMP4Q9Y6I8 212 aa6.62□□□□□ -1.35
HMGN1-201ENST00000288344 A0A0J9YWU9 116 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 UBE2L5PA0A1B0GUS4 154 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 ZNF705FA8MVS1 300 aaPredicted RBP6.61□□□□□ -1.35
HMGN1-201ENST00000288344 NDUFB4O95168 129 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 CA1P00915 261 aaPredicted RBP6.61□□□□□ -1.35
HMGN1-201ENST00000288344 ZNF705DP0CH99 300 aaPredicted RBP6.61□□□□□ -1.35
HMGN1-201ENST00000288344 ZNF705BP0CI00 300 aaPredicted RBP6.61□□□□□ -1.35
HMGN1-201ENST00000288344 FGF7P21781 194 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 ID1P41134 155 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 B2MP61769 119 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 RAB31Q13636 194 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 RGS21Q2M5E4 152 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 C10orf113Q5VZT2 155 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 SPATA31B1PQ5VZV4 182 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 C1orf158Q8N1D5 194 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 OR11H2Q8NH07 326 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 IL17DQ8TAD2 202 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 THAP6Q8TBB0 222 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 ZNF503Q96F45 646 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 AQP10Q96PS8 301 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 RARRES2Q99969 163 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 TMEM14CQ9P0S9 112 aa6.61□□□□□ -1.35
HMGN1-201ENST00000288344 RNF222A6NCQ9 220 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 SLC17A3O00476 420 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 GIPP09681 153 aaPredicted RBP6.6□□□□□ -1.35
HMGN1-201ENST00000288344 CXCL2P19875 107 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 S100A7P31151 101 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 CLINT1Q14677 625 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 PSG3Q16557 428 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 FAM78BQ5VT40 261 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 Q6ZRG5 221 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 RNF182Q8N6D2 247 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 ASB13Q8WXK3 278 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 PPP1R14BQ96C90 147 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 LINC00052Q96N35 136 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 NEU1Q99519 415 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 ATP5SQ99766 215 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 SLC25A2Q9BXI2 301 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 MED28Q9H204 178 aa6.6□□□□□ -1.35
HMGN1-201ENST00000288344 C11orf68Q9H3H3 251 aaKnown RBP6.6□□□□□ -1.35
HMGN1-201ENST00000288344 PRAC2D3DTV9 90 aa6.59□□□□□ -1.35
HMGN1-201ENST00000288344 COX7A2P2O60397 106 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms