RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SULT1A1P50225 295 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 IFITM3Q01628 133 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 VWC2Q2TAL6 325 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 C10orf113Q5VZT2 155 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 NRARPQ7Z6K4 114 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 TMEM252Q8N6L7 170 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 ENKURQ8TC29 256 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 GPN1Q9HCN4 374 aaPredicted RBP11.5□□□□□ -0.57
USE1-201ENST00000263897 DNAJC4Q9NNZ3 241 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 UQCC1Q9NVA1 299 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 WDR83OSQ9Y284 106 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 IGSF23A1L1A6 192 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 CRXO43186 299 aaPredicted RBP11.49□□□□□ -0.57
USE1-201ENST00000263897 PRR20EP86478 221 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 PRR20CP86479 221 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 PRR20DP86480 221 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 PRR20BP86481 221 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 PRR20AP86496 221 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 SPINK13Q1W4C9 94 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 RRN3P1Q2M238 152 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 MORN5Q5VZ52 161 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 MIC13Q5XKP0 118 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 Q6ZRG5 221 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 BPIFA4PQ86YQ2 179 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 OR8A1Q8NGG7 326 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 PTTG2Q9NZH5 202 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 DKK2Q9UBU2 259 aa11.49□□□□□ -0.57
USE1-201ENST00000263897 LOC102723971A0A1B0GUV8 181 aa11.48□□□□□ -0.57
USE1-201ENST00000263897 M0R2Z0 102 aa11.48□□□□□ -0.57
USE1-201ENST00000263897 CXCL2P19875 107 aa11.48□□□□□ -0.57
USE1-201ENST00000263897 ATP6V1FQ16864 119 aa11.48□□□□□ -0.57
USE1-201ENST00000263897 FAM222AQ5U5X8 452 aa11.48□□□□□ -0.57
USE1-201ENST00000263897 LCN15Q6UWW0 184 aa11.48□□□□□ -0.57
USE1-201ENST00000263897 CHAC2Q8WUX2 184 aa11.48□□□□□ -0.57
USE1-201ENST00000263897 TMEM208Q9BTX3 173 aa11.48□□□□□ -0.57
USE1-201ENST00000263897 ZNF331Q9NQX6 463 aaPredicted RBP11.48□□□□□ -0.57
USE1-201ENST00000263897 TEX48A0A1B0GUV7 120 aa11.47□□□□□ -0.57
USE1-201ENST00000263897 SNRPCP09234 159 aaKnown RBP11.47□□□□□ -0.57
USE1-201ENST00000263897 RPL29P47914 159 aaKnown RBP11.47□□□□□ -0.57
USE1-201ENST00000263897 HBG1P69891 147 aa11.47□□□□□ -0.57
USE1-201ENST00000263897 HBG2P69892 147 aa11.47□□□□□ -0.57
USE1-201ENST00000263897 HIST1H1AQ02539 215 aaPredicted RBP11.47□□□□□ -0.57
USE1-201ENST00000263897 OPCMLQ14982 345 aa11.47□□□□□ -0.57
USE1-201ENST00000263897 STX12Q86Y82 276 aa11.47□□□□□ -0.57
USE1-201ENST00000263897 RPUSD4Q96CM3 377 aaKnown RBP11.47□□□□□ -0.57
USE1-201ENST00000263897 SLC50A1Q9BRV3 221 aa11.47□□□□□ -0.57
USE1-201ENST00000263897 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
USE1-201ENST00000263897 PLA2G2EQ9NZK7 142 aa11.47□□□□□ -0.57
USE1-201ENST00000263897 YTHDF2Q9Y5A9 579 aaKnown RBP11.47□□□□□ -0.57
USE1-201ENST00000263897 SIX6O95475 246 aa11.46□□□□□ -0.57
USE1-201ENST00000263897 INSP01308 110 aa11.46□□□□□ -0.57
USE1-201ENST00000263897 B2MP61769 119 aa11.46□□□□□ -0.57
USE1-201ENST00000263897 RHOBP62745 196 aa11.46□□□□□ -0.57
USE1-201ENST00000263897 OXA1LQ15070 435 aa11.46□□□□□ -0.57
USE1-201ENST00000263897 OR1L4Q8NGR5 311 aa11.46□□□□□ -0.57
USE1-201ENST00000263897 SLC39A9Q9NUM3 307 aa11.46□□□□□ -0.57
USE1-201ENST00000263897 TRAV5A0A0B4J249 113 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 UBE2L5PA0A1B0GUS4 154 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 ZNF705GA8MUZ8 300 aaPredicted RBP11.45□□□□□ -0.58
USE1-201ENST00000263897 INMT-MINDY4F8WBC2 141 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 H3BQ15 152 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 BOLA2-SMG1P6H3BVE0 249 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 PRAF2O60831 178 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 RLN2P04090 185 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 IGLC2P0DOY2 106 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 PRB4P10163 310 aaPredicted RBP11.45□□□□□ -0.58
USE1-201ENST00000263897 BAXQ07812 192 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 BAP18Q8IXM2 172 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 SAT2Q96F10 170 aaPredicted RBP11.45□□□□□ -0.58
USE1-201ENST00000263897 PFDN5Q99471 154 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 NDUFAF3Q9BU61 184 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 NMES1Q9C002 83 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 PPP1R14DQ9NXH3 145 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 KMT2AQ03164 3969 aa11.45□□□□□ -0.58
USE1-201ENST00000263897 TRAV12-2A0A075B6T6 113 aa11.44□□□□□ -0.58
USE1-201ENST00000263897 H3BTX0 84 aa11.44□□□□□ -0.58
USE1-201ENST00000263897 PRM2P04554 102 aa11.44□□□□□ -0.58
USE1-201ENST00000263897 CYCSP99999 105 aaKnown RBP11.44□□□□□ -0.58
USE1-201ENST00000263897 NHLH2Q02577 135 aa11.44□□□□□ -0.58
USE1-201ENST00000263897 MARVELD1Q9BSK0 173 aa11.44□□□□□ -0.58
USE1-201ENST00000263897 PXMP4Q9Y6I8 212 aa11.44□□□□□ -0.58
USE1-201ENST00000263897 E5RGE8 158 aa11.43□□□□□ -0.58
USE1-201ENST00000263897 SLC17A3O00476 420 aa11.43□□□□□ -0.58
USE1-201ENST00000263897 MPDU1O75352 247 aa11.43□□□□□ -0.58
USE1-201ENST00000263897 FGF7P21781 194 aa11.43□□□□□ -0.58
USE1-201ENST00000263897 TSPOP30536 169 aa11.43□□□□□ -0.58
USE1-201ENST00000263897 GUK1Q16774 197 aa11.43□□□□□ -0.58
USE1-201ENST00000263897 FAM210BQ96KR6 192 aa11.43□□□□□ -0.58
USE1-201ENST00000263897 SLC25A31Q9H0C2 315 aa11.43□□□□□ -0.58
USE1-201ENST00000263897 PRAC2D3DTV9 90 aa11.42□□□□□ -0.58
USE1-201ENST00000263897 H0YIZ8 118 aa11.42□□□□□ -0.58
USE1-201ENST00000263897 AZU1P20160 251 aa11.42□□□□□ -0.58
USE1-201ENST00000263897 DAD1P61803 113 aa11.42□□□□□ -0.58
USE1-201ENST00000263897 TMEM256Q8N2U0 113 aa11.42□□□□□ -0.58
USE1-201ENST00000263897 LINC01587Q99440 93 aa11.42□□□□□ -0.58
USE1-201ENST00000263897 OR5AC2Q9NZP5 309 aa11.42□□□□□ -0.58
USE1-201ENST00000263897 BIRC6Q9NR09 4857 aa11.41□□□□□ -0.58
USE1-201ENST00000263897 P0DMU3 169 aa11.41□□□□□ -0.58
USE1-201ENST00000263897 FAM231AP0DMU4 169 aa11.41□□□□□ -0.58
USE1-201ENST00000263897 FAM231CP0DMU5 169 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 568 ms